Brachyistius frenatus (kelp perch): 138622941
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Entry
138622941 CDS
T10614
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04621
NOD-like receptor signaling pathway
bfre05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
138622941 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138622941 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
bfre04054
]
138622941 (nod1)
Pattern recognition receptors [BR:
bfre04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
138622941 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
LRR_4
NOD2_WH
AAA_16
MRM3-like_sub_bind
AAA_22
ABC_tran
PIF1
RsgA_GTPase
RNA_helicase
AAA_30
Motif
Other DBs
NCBI-GeneID:
138622941
NCBI-ProteinID:
XP_069558212
LinkDB
All DBs
Position
Unknown
AA seq
954 aa
AA seq
DB search
MWTQHNGDCCDVSMVETEEARVSCLSLLTYHRELLVSRLRSVQCVLDNLLANGFLCEEDV
EIVQRTVTKTDQVRKILELVQCKGEEACEYFIFIIYKVYDAYIDLQPWLREINYNPSRNV
TVMNVVNTDPISRYREKLRHEARQDTSFIMSYGQQEETRLDELYTDTVMELLNDCNESLG
FLESLDQLLGDDAVFNPQGEIIYVMGDAGVGKSILLQKLQNLWSKKELQTDAIFLFRFRC
RMFSIFKDSEQISLRDLLFKHNCYPNHDLDNEVFDYILRFPEKVVFTFDGYDEIQEDVDR
MNFPEVVSPEDKANPLQLLVSLLSGKLLKGSQKVLTARTGIEIQSRVIRKKVVLRGFSLA
HLKTYINLHFKDQEHRELVSVQLDASPHLCGLCSTPLFCWIVFKSFRHLHTVHDSFHLPD
TCITLTDIFLLLSEVFLSRLASPAPSLLKKRTRCTSETFKAGLRPLAAFAKLALQGMERG
SFICSQEEVGGCGLTEEDLSLGFLRPVREFEASGSPATFEFLHITLQSFLAAVALVLDEQ
AAADSILKFFTECSRRRNTSCLPFGFCTGGSSKPREKKPFTTNEHLQFTNLFLCGLLSKS
HTGLVGHIMSPVLLKKKQALLKSYLSTSVRSHLHGLPHYNGDEGKKVHVLPNFLWMLRCI
FETGSKDVAQVTAKGITATLIKLGYCNVYSGDCTALNFVLQHRQKLLGLDMDNNNIGDFG
VKQLRPSFSKMTVVRLCVNHLSDSSIEVLAEELCKHKVVEVLGLYNNHITDVGAQLVAQI
IERCPKLRVVKIGKNKITGVGGRYLANAVQKSTSIFDVGMWGNSIGDEGAEAFAEALRNH
PNLTNLSLSANGITSSGGKCLAEALKENRVLRIFWLVQNELSDDAAPRLAELIRMNATLT
HLWLINNRFTVEGIRQLAEALAHNTGLKEICVKGNQLSKEEQEPFQTEKRLRFN
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgcagcacaatggcgactgctgtgacgtcagtatggttgagacagaagaagcc
agagtgtcgtgcctcagcctgctcacctaccacagagagctcctggtgtcccggctgagg
agcgttcagtgcgtcctggacaacctgctggccaatggcttcctctgtgaggaggatgtc
gagatcgttcagagaactgtcaccaagacagaccaggtgcgtaagatcctggagcttgtc
caatgcaaaggggaagaggcctgtgaatacttcatcttcatcatatataaagtttatgat
gcatacatagacctccagccatggctgagagagatcaactacaaccccagcaggaacgta
acagtgatgaacgttgtaaacacagatcccatcagcagataccgtgagaagctgcgacat
gaagcgaggcaggacaccagcttcatcatgtcgtacggccagcaggaggagacccggctg
gatgaactctacaccgacacggtgatggagctgctgaacgactgcaatgagagcctgggc
ttcttggagagtctggaccagctgctgggagacgacgcggtcttcaatccgcagggtgaa
atcatctacgtgatgggggacgctggtgtgggaaagtccatcctgctgcagaagctccag
aacctctggtccaagaaggagctgcagacggacgccatcttcttatttaggtttcgctgc
aggatgttcagcatctttaaggactcggagcagatctccctcagagatcttttattcaaa
cacaactgctaccccaaccacgacctggacaatgaggtctttgattacatcctgcgcttc
ccggagaaggtggtttttacttttgatggctatgatgagatccaggaggatgtggacagg
atgaattttcctgaggtggtgtcaccggaggacaaggccaaccctttgcagctgctcgtc
agcttgctcagcgggaaactcctcaagggctcccagaaggtgctgacggcccggacgggg
atcgagatccaaagcagggtgatcaggaagaaggtggttctgcgcgggttctccctggct
cacctgaagacctacatcaatctgcactttaaggatcaggagcaccgggagctggtgtcg
gtccagctggacgcgagcccccacctctgtggactctgctccaccccgctgttctgctgg
atcgtcttcaagagcttcaggcacctccacaccgtgcacgacagcttccacctgcccgac
acctgtatcacactcaccgacatcttcctcctgctgtccgaggtcttcctcagccgcctc
gcctcgccggccccatctctactcaagaaaagaacccgctgcacctcggagactttcaaa
gccggactcaggccccttgctgcgtttgccaagctggctctgcagggtatggagagaggc
agcttcatctgcagccaggaggaggtcggtgggtgtggcctgacggaggaggacctgtct
ctgggctttctcagacctgtcagggagtttgaagccagtgggagccccgctacctttgag
ttcctccacatcaccctccagtccttcctggcagcggtcgctcttgtgttagatgagcag
gccgctgccgactccatcctcaagttcttcaccgagtgcagcaggaggagaaacacgtcc
tgtctgccctttggcttctgtaccggcggatcctccaagcccagggagaagaagcccttt
acgactaacgagcaccttcagttcaccaatctgttcctgtgcgggctgctgtccaagagt
cacacaggcctggtgggacacatcatgtctcccgtgttgttaaagaagaaacaggccttg
ctgaagtcctacttgtctacgagcgtccggtcccacctgcacggattacctcactacaac
ggtgacgaggggaagaaggttcacgttctgcccaacttcctgtggatgctgaggtgcatc
tttgagacggggagcaaagacgtcgctcaggtgacggcgaagggcatcacggccaccctc
atcaagctgggctactgcaacgtttactcaggcgactgcaccgccctcaactttgtgctg
cagcaccgtcagaagctgctggggctcgacatggacaacaacaacatcggagactttggg
gtgaagcagctcagaccttccttcagcaagatgacagtggtgaggttgtgcgtcaaccac
ctgtcagacagcagcatcgaggttcttgcagaggagctgtgcaaacacaaagttgtcgag
gtgttggggctttacaacaatcacatcacagatgttggagcccagctggtcgctcagatc
atcgagagatgcccgaagctacgagttgtcaagatcggtaaaaacaagatcaccggtgtt
ggtgggagatatctggccaatgcagtacagaagagcacgtcgatatttgatgtggggatg
tgggggaacagtatcggtgacgaaggtgcagaagcgttcgctgaagctttgaggaaccac
ccgaatctcaccaacctcagtctgtcagccaacggcatcacgtcgtctggtgggaagtgt
ctggcagaagccctgaaggagaacagagtcctcaggatcttctggttggtgcagaacgag
ctgagcgatgatgcagctccacgtctggctgaattgatccgaatgaacgccactctaacc
cacctctggttgatcaacaaccgcttcactgtggagggaatcagacagctggcagaggcg
ctcgctcacaacacgggactcaaagagatctgcgtgaagggaaaccagctctctaaagag
gaacaggaaccgtttcagacagagaagcggctgcggtttaactga
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integrated database retrieval system
