Brachyistius frenatus (kelp perch): 138623265
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Entry
138623265 CDS
T10614
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138623265 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfre04121
]
138623265 (mid1)
Enzymes [BR:
bfre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138623265 (mid1)
Ubiquitin system [BR:
bfre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138623265 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
PRY
zf-RING_2
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
138623265
NCBI-ProteinID:
XP_069558787
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSETIQSISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRRERAGPDSRAMTSPGDRVQ
CQFCEQDPPQDAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPLLDSHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALGDRYDKLKKSPGRFLCVGRDRSHQEA
DQQALDSNLSSLIKRTSELESLMGKLIQTCQHVEVNATRQENKLLEECDLLINIIQQRRQ
IIATKIKEGKSVRLRKLAQQIASCKQCIERSSSLITQADQTLKETDQPRFLQTAKSVCDR
VSMATASSQILLPEMNLNDTFDTFALDFTREKKMLESLDYLTAPDPPVIREELCTASYDT
ITVHWTSDDEFVVVSYELQYAIYTRQSNVVSLCNSADSWMIVPNIKQNHYTVHGLQCGTK
YIFIVKAINQAGNRSSDPGKLKTNSQPFKLDAKSAHRKLRVSHDNLTVERDETSSKKSHS
QDRFSSHSSYGVTGNVYIDSGRHYWEALIGGSTWFAVGIAYKSAPKHEWVGKNSASWVLS
RCNNSWVVRHNSKELPIEPSPHLRRLGVLLDYDSGSLSFYDAVGSQHLYTFDISFAQPVC
PVFNVWNRCLTILSGLPIPDHLEGTDYN
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgtccaatctgtctggagctttttgaggacccg
ctgctgttgccttgcgctcacagtctttgtttcaactgtgcccaccgaatcctggtctcc
cactgcacccccagcgagacaattcagtcaatcagcgcctttcagtgcccaacgtgtcgc
tatgtcatcacccttaaccagaggggcctagagggactcaagcgcaacgtaaccctgcag
aacatcattgaccgttaccaaaaggcttctttaagcggaccaaattctcctaacgagact
cggcgtgagcgagccgggcccgacagcagagccatgacgtctcccggtgaccgcgtgcag
tgtcagttctgtgagcaggaccctccgcaggacgccgtgaagacctgcgtcacctgcgag
gtgtcatactgcgaggagtgtctgaaggctacccatcccaacaagaagcctttcacgggc
caccgtctaatcgagcccttgctggactcccatctgcgaggcctcatgtgtctggagcat
gaggatgagaaggtcaacatgtactgtgtgacagatgaacaattgatctgtgcattgtgt
aagctggtcggccgacacagagaccaccaagtggcagccctcggcgaccgatatgacaaa
ctcaagaaatctcctggccgctttctctgtgtggggcgtgatcgttcacaccaggaggca
gaccagcaagcgttggattccaacctcagcagtctaatcaagaggaccagtgagttggaa
agtctgatgggcaaacttatccaaacctgccaacatgtggaggtaaatgcaacacggcaa
gagaacaagctgctggaagagtgtgacctgctgattaatatcatacagcagcgaagacaa
atcatagcgaccaagataaaggaggggaagtctgttaggctgaggaaactagcccagcag
atagcgagctgcaagcagtgcatcgagaggtcctcttctctcatcactcaggccgaccaa
accctcaaggagacggaccaacctcgcttccttcagacagctaagagtgtctgtgacaga
gtttctatggcaacggcatcctctcagatcctgctaccagaaatgaacctgaatgacacc
tttgatacgtttgctttggacttcacaagggagaagaaaatgctagaaagtttagattac
ctcacagcaccggatccaccagtaatccgcgaagaactatgcacggcttcatatgacaca
atcacagttcactggacatcagatgatgaattcgttgtcgtgtcatatgaacttcagtac
gccatctacaccagacaatctaatgttgtcagtttgtgtaactctgctgacagctggatg
atagtaccaaacatcaagcaaaatcactacactgtgcatggactccagtgtggcaccaag
tatatcttcatagtgaaggccataaaccaggctggaaaccgcagcagtgacccagggaaa
ctcaagaccaacagtcagccattcaaactggacgcaaagtccgctcaccggaaactgagg
gtgtcccatgacaacctgacagtagagcgggacgagacgtcgtccaagaagagccacagt
caggaccgcttctccagtcacagcagctacggtgtcacagggaatgtctacatcgacagt
ggccgccattactgggaggctctgataggaggaagcacatggtttgcagtgggcattgct
tataagtctgcaccaaaacatgagtgggttggcaaaaactcagcttcctgggtgctgtcg
cgctgcaacaactcgtgggtggtgcgtcacaacagtaaggagttgcccatcgagccgtca
ccccacctgaggcgtctcggggtgttgttggactacgactctggatctctgtctttctac
gacgctgtcggctctcagcacttgtacacgtttgacatctccttcgctcagcccgtgtgc
cctgtgttcaatgtgtggaatagatgtttaacaatcctcagtggactgcccatccccgat
cacttagaggggacggactacaactga
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