Brachyistius frenatus (kelp perch): 138623364
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Entry
138623364 CDS
T10614
Name
(RefSeq) transcription factor Sox-9-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfre03000
]
138623364
Transcription factors [BR:
bfre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138623364
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
bHLH-MYC_N
PA26
DUF533
Motif
Other DBs
NCBI-GeneID:
138623364
NCBI-ProteinID:
XP_069558947
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MNLLDPYLKMTEEQEKCHSDAPSPSMSEDSAGSPCPSGSGSDTENTRPSDNHLLMGPDYK
KEGEEEKFPVCIRDAVSQVLKGYDWTLVPMPVRVNGSSKSKPHVKRPMNAFMVWAQAARR
KLADQYPHLHNAELSKTLGKLWRLLNEVEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKS
VKNGQSEPEDGEQTHISPNAIFKALQQADSPASSLGEVHSPGEHSGQSQGPPTPPTTPKT
DLPSSKADLKREGRPIQEGTSRQLNIDFGAVDIGELSSDVISNMGSFDVDEFDQYLPPHS
HAGVTGAAQAGYTNSYGMNSSSVGQAASVGAHAWMSKQQQQQQQQQQQQQQQQQQHSLTT
LGGGGEQGQQGQQRTTQIKTEQLSPSHYSEQQGSPQHVTYGSFNLQHYSTSSYPSITRAQ
YDYSDHQSGANSYYSQGSSLYSTFSYMSPSQRPMYTPIADTTGVPSVPQTHSPQQWEQQP
IYTQLSRP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgacccttacctgaagatgacagaagaacaggagaagtgtcactctgac
gctcccagccccagcatgtctgaggactccgcgggctcgccgtgcccgtccgggtccggt
tcagacactgaaaacacccggccgtccgacaaccacctcctcatgggtccagactacaag
aaggagggcgaggaagagaagttccccgtgtgtatcagagatgcagtgtcccaggtgttg
aagggctacgactggaccctggtgccaatgccggtgcgcgtcaacggctcaagtaaaagc
aaacctcatgtcaaaagacccatgaacgcattcatggtgtgggctcaagcagcacggagg
aagctggccgatcaatacccgcatctgcacaacgcggaactcagcaaaactctgggtaaa
ctttggagattgctcaatgaggtagagaagcgcccgttcgtggaagaggctgagcgtttg
agggtgcaacacaagaaggatcatcccgactacaaatatcagccaaggcggagaaaatct
gtgaagaacggtcaaagcgaacccgaggacggcgaacaaactcacatctctccaaatgcg
atcttcaaggcgctgcagcaggcggactctccggcgtcgagcttgggcgaggtgcattct
cctggagaacattcaggtcaatcacagggccctccaacacctccaaccacccccaagaca
gacctcccctccagcaaagctgacctgaagcgtgaggggcgccccatacaggagggcacc
agtcgccagctcaacatcgactttggagctgtggacattggtgagctgagcagcgatgtc
atctccaacatgggaagcttcgatgttgatgagttcgatcaatacctgccgcctcacagc
catgctggggtgaccggcgcggcccaggccggctacaccaacagctatggcatgaacagc
tcttcagtcggccaggcagccagtgttggagcccacgcctggatgtccaagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcactctctgaccacc
ctgggtggaggaggagagcaaggccagcagggtcaacagagaaccacccagattaagaca
gagcagctgagccccagccactacagcgagcagcagggctccccacagcacgtcacctat
gggtccttcaacctacagcactacagcacctcctcttacccgtccatcacgagagcacag
tatgactattcagaccaccaaagtggtgccaactcctactacagccagggctccagcctg
tactccaccttcagctacatgagccccagccagaggccgatgtacaccccgattgctgac
accaccggggtgccctctgtgccgcagacccacagcccgcagcaatgggagcagcagccc
atttacacacaactctccaggccttga
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