Brachyistius frenatus (kelp perch): 138623454
Help
Entry
138623454 CDS
T10614
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre00310
Lysine degradation
bfre00514
Other types of O-glycan biosynthesis
bfre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
138623454 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
138623454 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bfre01003
]
138623454 (colgalt1a)
Enzymes [BR:
bfre01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
138623454 (colgalt1a)
Glycosyltransferases [BR:
bfre01003
]
O-Glycan biosynthesis
O-linked Gal type
138623454 (colgalt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
DUF6492
Motif
Other DBs
NCBI-GeneID:
138623454
NCBI-ProteinID:
XP_069559102
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MPGPAVLPAALLLFLLSCCSPARGYFAEERWSPESPLLAPRVLLALICRNSEHSLPYFLG
TIERLNYPKDRMALWVATDHNEDNTTAVLRDWLVKLQSHYHYVEWRPKEEPRRYEHEDGP
KQWTDLRYEHVMKLRQVALESAREMWADYFMLVDCDNLLTNPNVLWKLMKENKTIIAPML
ESRAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKEASRQLAF
HPPHPQYSWAFDDIIVFAFSARMADVQMFVCNKETYGYFPVPLRSHNTLQDEADSFLHSV
LEVNVRNSPVMPSKHIRVPRKQPDKLGFDEVFMINLQRRTDRRDRMLKTLYEQEIACKVI
PAVDGKAMNISEIHTMGIHMLPGYSDPYHGRPLTKGELGCFLSHYKIWKEVVERRLHTSL
VIEDDLRFEIFFKRRLMNLMSEVEQEGLDWDLIYIGRKRMQVDHPEKAVPNIHNIVEADY
SYWTLGYMISLQGAEKLLKAEPLKRILPVDEFLPIMYNKHPVSDYMEQFETRDLKAFSAE
PLLVYPTHYTGDSGYISDTETSTVWDNDKVRTDWDRARSGKTREQAEISSEAKNSDVLQS
PLDSTARDEL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggcccgccgtcctgcccgccgctctgctcctcttcctcctgtcctgctgcagt
cctgctcggggatattttgcggaggagcgctggagccccgagtccccgctcctcgctccc
cgggtcctcctcgccctcatttgccgaaactccgagcactctttgccgtatttcctgggc
accatcgagcgcctcaactatcccaaggaccgcatggctctctgggtagcaactgatcat
aatgaggacaacaccacagccgttctgcgggactggcttgtaaagttacagagccattac
cattatgtggagtggaggccaaaggaggaacccagacgttacgagcacgaggacggtccg
aagcagtggacagatctccgttatgaacatgtaatgaagcttcggcaagtcgctctggag
tccgctcgggagatgtgggcagactactttatgctggtggactgcgataacctcctcacc
aaccccaacgtgctgtggaagctcatgaaagagaataagacgattatcgctccgatgctc
gaatcccgcgcggcctattcaaacttctggtgtggaatgacctcccagggttactataag
cggacccctgcctacatacccatgaggaagcaggtgcggaagggctgttttgccgttccc
atggtccactccacgttcctgatagacctcaggaaggaggcttccaggcagctggccttt
caccctccacacccgcaatacagctgggcttttgatgacatcattgtgtttgcattctct
gctcggatggcagatgttcaaatgtttgtatgtaacaaggagacctatggttacttccct
gtgccactgcgctcccacaatactttgcaagatgaagctgacagcttcttgcactccgtg
ttggaagttaatgtgcgaaattccccagtgatgccttccaaacacatacgtgttcctaga
aaacaacctgacaaactgggctttgatgaggtgtttatgataaacctgcagaggcggacc
gaccgacgagatcgaatgctgaagacgctgtacgagcaggagattgcttgtaaggtcatt
ccagctgtcgatggaaaagcgatgaatatcagtgagattcatactatgggcatccacatg
ctccctggatacagcgacccttatcacggtcgaccactgacaaagggagagctgggctgc
tttctttcccactacaaaatctggaaagaggttgttgagcgacgcttgcacacctctctg
gtgattgaagacgacctgcgcttcgagatcttcttcaaacgtcgcttgatgaacttgatg
agcgaggtggaacaagaaggactggactgggatctaatttatatcggtcggaagagaatg
caagtggatcacccggagaaagcagtgccaaatatacacaacatagtggaagcagattat
tcatattggacattaggctatatgatatcattacagggtgctgagaagcttttgaaagca
gaaccactgaagaggattttgccagtggatgagtttcttcccatcatgtacaacaaacat
cctgtgtctgactacatggaacagtttgaaaccagggacctgaaggcattttccgcagag
cctctcctcgtgtatccgacacactatacaggcgactctggctacatcagcgacactgag
acctccactgtgtgggacaatgacaaggtccggacagactgggacagggcacgctcagga
aaaactcgggagcaggccgagatcagcagcgaggccaagaactcggatgtgctccagtcc
cctttagacagtacggcacgggacgagctatga
DBGET
integrated database retrieval system
