Brachyistius frenatus (kelp perch): 138623491
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Entry
138623491 CDS
T10614
Symbol
tdrd6a
Name
(RefSeq) tudor domain-containing 6
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138623491 (tdrd6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
138623491
NCBI-ProteinID:
XP_069559145
LinkDB
All DBs
Position
Unknown
AA seq
1936 aa
AA seq
DB search
MSSIPGLPTQGSNVTILITRVHLNPLCVLVEFWGKFSQDKTTYYERLAEDIQSPRNTFQD
LEGHPGDQCLVQIDGIWYRARIVSINGLKYTVFLIDKGMTCSATTSMLAWGKKEHFHLPP
EVEFCVLANVLPLSLENRWSPMALEFLKSLSGKTVAAHVQDVLVPHRTFLLNMPYISKQM
YEMGFAKKISPDKFQNSVLVSLQTPGGADQIQPLSMAAGDRQLKQELFFPELPGGTVETV
IVTEVTNPQRIFCQLKVFSQELKKLSEQITQSCEGRTSKCIISADMIGFPCAARGSDGKW
YRSVLQQVFPANKIVEVLNVDYGTKQFVQVENVRTLAAEFFRMPVVTYICSLHGIIDKGV
GWTTNQIDYLRSLLLYKTVIAKFEYQSISEGVHYVTLYWDDNINMNNLFGSKENCLLECE
KTLGDYAIRSTASSRQHPAQQQRTDRNMLPPGQAVKEKDKKAAAAAEKFPAEDLSPTSSH
VAFVKDASDPSEFWIQTQNYTKELSELMASMHHLYKDSASKDAVKNPTVGLYCAARAEDS
DFYRATVAEVEETQLKVFFVDYGNTEVVDRSNIRTLPAELKKLPRLALKCTLAGVKPKDG
RWSQSASELFINTVTDKELNVHVTAKYEDGYVVQLTDREAQGEQDVGTLMCSSGLAERAE
IEKQAKATVQTAYTSPSQHPDVVFPSVFRNSGMFFQSQNPAGLASNERKVSTFREHMFPI
GSILDVSVSYIKSPNDFWCQLAQQAGHLKSLMHDIQAHYANSEYQPNVETACVARHPENR
MWYRALVIHKHETPLVDVLFVDYGQTETVSLFDLRRICPEFLTLHGQAFRCSLLNPIDPT
SAINEWNEEAVARFHNFVDIAASSFVILKCTIYAVMYSDQKVVFNIVELETPFESICTSM
VNLVKSAPPKKAARPSFRLDTYYYSTHNVKTGTEERITVTCVNGVGKFYCQLEKNINVMK
DLMVKVNDLCHQLQNAKLPRVFGTLCFAKYTDGQWYRGQIKATKPAIVVHFVDYGDTIEV
EKSDLLPVPREANDIMSVPVQALVCGLSDIPVDVPSEVNTWFEIHATESSFQALVVAREH
DGKLLVELYRRHAQLNAKIKKRFHIEMNSTDQVVCQGRKTLPSTANPTPKTPKAVPTPAT
DTDDHTQALKKNDLAVPSPPRPKRPVSEIGQKVKMAAIELYKPPHQRCGRTPSNVSEPRK
ENLPQDPKLLNKSESSGTESQKESEAGKNPKLTDLPSKSITCGMTADVYVSHCNSPASFY
VQFVSEENNIFSLVEKLNDPESNPNTSDITDVQPGDLVKAEFTNDSSSYRAVVREIHGNT
TALVEFVDFGNAESTPISKIGRLQESFLQFPAYSTHCMLSDAAVVGSEGALDPELLSAFK
EDIGGCGERVLKCQFNRQVGPVWEVSLKDNDVNVVCRVATKCPEITAEKVEQAKEEPAQT
SDTDSIERPRLNTCLLRYSLQDLLEDQLVYITTINEDHTFWCQPANSEELDKILSSISEV
EDHGCMEPGALLPGTPCFAFFSDDQLWHRAEVVDKDGDELSVLFVDYGNEAQVNITEVRE
MPRPLLEIPPQAFLCGLVGFDTTCGSWDSSATHELSKLTTDKLLQLTVVEETVAEGKIKW
VVRLQCEGQEINEGMKICWKCFTEEDEPDAVGLTAESETQLQEDSAEDEDQPEQPAVCVH
PERGHVEEHGGDDPADSRTADDVPDLANSPESSERSEDLVHSESSVTSPKDECVSVEKGN
IVPITAMCPKNILPSNSGVDETTAPSFNNKDDSHVSALSCNMNVEAGEGIEEESASVVDT
VGSHDVNSTSDENLEEAVDESKTITTDEESLPEEENTSCSSSDIMNVSDPAKETDDGEVS
VAMVTPLTRTTAVRMVQADLVLPALPLCDVPTWEDTEARDDFTQEEVPCVTKQMERGQKT
ATHFDHTATQLSLHQR
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaattcctggactccctacacaaggatcgaatgtaacaattctcattacgagg
gtccacctcaatcccttgtgtgtgctcgtggaattttgggggaaatttagccaggacaag
acaacatattatgagcgcctggctgaagacatccagtctcccagaaacacatttcaagac
ttggaaggacatccaggtgaccagtgcttggttcagatagatggtatttggtacagagcc
cgcatagtctcaataaatgggttgaaatacaccgtgttcctcattgacaaagggatgaca
tgcagcgccaccacaagtatgctggcgtggggtaagaaagagcattttcatctgccccct
gaagtggagttttgtgtgctggctaatgttttaccactctcacttgagaacagatggtct
ccaatggctcttgaatttcttaaatctctttctggaaaaactgtggcggcacatgtgcaa
gatgtactagtgccgcacagaacgttcctcctgaacatgccttacatatccaaacaaatg
tacgagatgggatttgccaagaaaatatctccagacaagttccagaactctgtactcgtg
tcactgcagacccccggtggagccgatcagatacagccgctctccatggcagcaggtgat
cgacagctcaagcaggagctgttcttcccagagctgccgggaggaacagtggagaccgtc
atcgtcacagaagtgacaaatccgcagaggattttttgccagttgaaggtcttctcacaa
gagttgaagaaactgtcagagcaaatcacacagagctgcgagggcagaacgtccaaatgc
attataagcgctgacatgattgggtttccgtgtgccgcaagaggaagtgatggcaagtgg
taccgctctgttctacaacaggttttcccagccaataaaattgtggaagtgttgaatgtt
gactatggaacaaaacagtttgttcaagtggagaacgtgaggacgctggcagctgagttc
ttcaggatgccagttgtcacttacatctgctccctccatggaatcatcgacaaaggggtg
ggatggacaaccaaccagatcgactatctcaggtcactcctcctgtacaagacagtgatt
gccaaatttgagtaccaaagcatctctgagggtgttcactatgtcacactctattgggat
gacaacataaacatgaacaacttgtttggatccaaggagaactgtttgctggagtgtgag
aaaactcttggagattatgccattcgtagcacagcttccagccgccagcatccagcccaa
caacaacgaactgatagaaatatgttaccccctggacaggctgtaaaagaaaaagacaag
aaagcagcagcagcagcagagaagttccctgctgaggatctctctccgacctcctcacac
gtggcatttgttaaggacgcatccgatccatcagagttttggatccaaacacagaactac
accaaggagttgagtgaactgatggctagtatgcaccatctgtacaaagactcagcaagt
aaagatgcagtgaaaaatccaactgttggactctactgtgctgccagggctgaagatagt
gacttctacagagcaactgtggctgaagttgaggagacacaactcaaagtgttctttgtc
gactatggaaacactgaggtggttgataggagtaacatcaggacgcttccagctgagttg
aaaaaactgccacgactggcactgaaatgcaccctggctggtgtcaaaccgaaagacggg
agatggagtcaaagtgcctccgagcttttcatcaacacagtcacggataaagaactaaat
gtacacgtgacggcaaaatacgaggacggctatgttgtccaactaacagatcgtgaagca
caaggagaacaagatgtcggtacgctgatgtgtagctctggtcttgctgaaagggctgaa
atagagaagcaggccaaagctactgtgcaaactgcgtacacgtctccctcacaacatcca
gatgtagtcttcccaagtgtatttaggaacagtggaatgttttttcagagccaaaaccca
gctggcctcgccagcaacgaaagaaaagtctctaccttcagggagcatatgtttccgatc
ggaagtatcctggatgtcagcgtgtcctacattaaaagcccgaatgacttctggtgccag
ctagcacaacaggctgggcacttgaaatcgctcatgcatgacatacaggctcattatgcg
aacagcgagtatcagcccaacgtggaaacggcttgtgttgctcgccaccctgaaaatcga
atgtggtacagggcacttgtgattcacaaacacgaaacccctcttgtggacgtgttgttc
gtggactacggccagacagagacggtctccctctttgacctgaggaggatctgcccagaa
ttcctcacccttcatggtcaagcttttcgatgcagtctgttgaaccccattgaccccaca
tctgccataaatgagtggaatgaagaagcagtagcgaggttccacaattttgtcgacatt
gcggcatccagctttgtgattttgaagtgcaccatatatgctgtcatgtacagtgaccag
aaggttgtattcaacattgtggaactagaaactccctttgagagtatctgcaccagtatg
gtcaatctggtcaaaagtgcacctcccaagaaagccgccagaccgtctttccgcctggac
acatactactactcgacacacaacgtcaaaactgggacggaggaacggatcaccgttaca
tgtgtgaacggtgtcggtaagttctactgccagctggagaagaacattaatgtcatgaaa
gatctcatggtgaaagtgaacgatctctgccatcagcttcagaatgcaaagcttccgaga
gtgtttgggactttgtgttttgcaaagtacactgacgggcagtggtacaggggacagatc
aaggccacaaaaccagcaattgtggttcactttgtggattatggtgacactattgaggtg
gagaaatctgaccttctcccagttcccagagaagcaaatgacatcatgtctgtgccagtg
caagcacttgtttgtggcctctctgatatccctgttgatgttcccagtgaggtgaacact
tggtttgagatacacgctacagaatcttcattccaagcactagttgttgccagagaacat
gacgggaaactgctggttgagctgtatcgcagacacgctcagctcaatgcaaagatcaag
aaaaggtttcatatcgagatgaactcaactgaccaggtcgtctgccaaggtcggaaaacg
cttccgtctacagcgaatcctaccccgaagacaccaaaagctgtcccaacaccagccaca
gacacggacgaccatacacaagccctgaagaaaaatgatctcgccgtcccaagtcctcca
cgtccaaagaggcccgtttctgaaattggtcagaaggtcaaaatggctgctatcgagctg
tacaaacctccgcaccaaaggtgtggcaggacgccaagtaatgtttctgagccaagaaaa
gaaaatcttccccaagacccaaaactgctcaacaagtcagaatcatctggcactgaatct
cagaaggaaagcgaggctggaaaaaacccaaaactcacagacctgccctcaaaatccatc
acatgtggaatgacagcggatgtttatgtgtcacactgcaacagccccgcgagtttctac
gtgcagtttgtcagcgaagagaacaatatattttccctggtggaaaagctcaatgatccc
gaatcaaacccaaacaccagtgatatcacagatgtgcagccaggtgatcttgttaaagca
gagttcacaaatgattcctcgtcgtaccgagcagttgtgagagaaatccacggcaacaca
acagctctcgtcgagttcgtcgattttggaaacgccgagtcaacgcccatctccaagatt
gggcgactccaggagtccttcctgcagtttcctgcttacagcacacattgtatgctgagc
gacgctgcagttgttggaagtgagggagcgcttgatccagaactgttgtcagctttcaaa
gaagacatcggcggctgtggagaacgagtactgaagtgccagttcaacaggcaggtggga
ccagtgtgggaagtcagcctgaaggacaacgatgtgaatgtcgtgtgtcgggtggcgaca
aaatgtcccgaaatcactgcagagaaagttgaacaagcgaaggaggagccagcccagacc
tcggacacggacagcatcgagagaccacgactgaacacctgcttgctacgctacagtctg
caagaccttttagaggatcagctggtctacatcacaaccataaatgaagatcacaccttc
tggtgtcagcctgccaactcggaggaactcgataagatactgtcaagtatctcagaagtt
gaggatcacggatgtatggagccgggcgctctcctccccggcaccccgtgctttgctttc
ttctcggacgatcagctttggcaccgagcagaggtcgtggacaaagacggagacgagctg
tctgttctcttcgtggactatggaaacgaggctcaagtcaacattacagaagtgagagaa
atgccccgtcctttattggagattcccccgcaggcgtttttatgtgggcttgtaggcttt
gacaccacatgtggctcgtgggacagcagcgcaacacatgaattgtccaaacttacgacg
gacaaattattacagctaacggtcgttgaagaaacggtcgcagaaggaaaaatcaagtgg
gtcgtgcggttgcaatgtgaaggccaggagataaatgaggggatgaaaatctgctggaag
tgcttcacggaagaagacgagcctgatgcggttggactgactgccgaatccgaaacacaa
ctgcaggaagactcggctgaggacgaggaccaaccggagcaacctgctgtctgcgttcac
cccgagagaggccacgttgaagagcacggcggtgacgatcccgctgactctcgcacagca
gacgacgtcccagatttagcaaatagtccagagagcagcgagcgctctgaagatttggtt
catagtgagtcttctgttacatctccaaaggacgaatgtgtttctgttgagaaggggaac
attgtccccatcacggcgatgtgtcccaaaaacattttgccaagcaacagcggtgtagac
gaaaccacggcaccttcattcaataacaaagatgacagccacgtttcagccttgagctgc
aacatgaatgtggaagctggcgaaggcattgaagaagagagcgcttcggtggtggacacc
gttgggtcacatgacgtcaattctacatcggatgagaaccttgaagaggcagtggacgag
tccaagacgataacaactgacgaagagtccctacctgaagaggagaacacctcctgctcc
agctctgacatcatgaatgtttctgatccagccaaggaaacggatgacggagaagtttct
gttgccatggttactcctctgacccgtacgacggcagtgagaatggttcaggctgatttg
gtgcttcctgcgctgccgttgtgtgatgtccccacatgggaagatactgaggctagagat
gacttcacacaggaagaggtgccatgtgtcaccaaacaaatggagcgcggccagaagacg
gcgacacacttcgaccacacggcgacgcagctctcgctccaccaacggtaa
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integrated database retrieval system