Brachyistius frenatus (kelp perch): 138623576
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Entry
138623576 CDS
T10614
Symbol
optc
Name
(RefSeq) opticin isoform X1
KO
K08127
epiphycan
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bfre00535
]
138623576 (optc)
Proteoglycans [BR:
bfre00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
138623576 (optc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRRNT
LRR_9
LRR_2
Motif
Other DBs
NCBI-GeneID:
138623576
NCBI-ProteinID:
XP_069559265
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MHSRNKAFVLRMSMQSLVVLALVLDFLGPCPGMTAPPSEPDDDAFDIESYDLTSETEWEN
LDINVYEDSYNYNDLDQESEVDEAPDISPLAKQSPTQHYEEEVTLPPAPFNLDFKGPGLF
GPETALGMPTCLLCVCIGGSVYCDDMGLHQIPPLPKDTRHLYCRFNNIRHVKNTDFINLD
KLKSIDLTGNQISGMDEDVFQSLPQLQELLLADNNLQMMPELPITMKRIDLRNNRLSSQG
VHSEGFKDMSQLEFLYLSNNNLDYIPTPLPLSLKVLHLQNNKIQFLHEDTFCNLNDLNFI
RRNLEDIRLDGNPLNINLFAKAYVCLPRIPVGNN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcagaaacaaagcatttgtgctgaggatgtcaatgcagtctctggtggttctt
gccttggttttggacttcctgggcccctgccctggcatgacagctcctccaagtgagcca
gatgatgacgcttttgacatagagagctacgacctgaccagtgagacagagtgggagaac
ctggatatcaacgtttatgaagacagttataattataatgacttggaccaagagagcgag
gtggatgaagcaccagacatctcaccactagccaaacagtccccaactcaacactacgag
gaagaggtgaccctgccaccagctcctttcaatctggacttcaagggaccaggcctcttt
ggccctgagactgcattgggtatgcctacctgcctactgtgtgtgtgtattgggggcagt
gtgtactgtgatgacatgggcctacatcagatcccacccctgcccaaagacactagacat
ttgtattgccgcttcaacaatatccgacatgtcaagaacacagactttatcaatctcgat
aaacttaagtccattgatctcactgggaatcagatctcagggatggatgaggatgtgttt
cagtctctgccacagctccaggaattactgttggctgataacaacctgcagatgatgccc
gagctgccaatcaccatgaaacgcattgatctacgtaacaacaggctgagcagtcagggg
gtccattctgagggattcaaggatatgagccagttggaattcctttatctgtcgaacaat
aacctggattacatccctacaccacttccactcagcctgaaagtgttacatcttcagaat
aacaaaatccagtttctgcacgaggacaccttctgtaacctcaatgatctcaacttcatc
cgccgtaacctggaggatatacgtctggatggaaaccccctgaacatcaacctgtttgcc
aaggcctatgtctgcctgccacgcattcccgtagggaataactga
DBGET
integrated database retrieval system
