| Entry |
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| Symbol |
arid1ab
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| Name |
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A
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| KO |
| K11653 | AT-rich interactive domain-containing protein 1 |
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| Organism |
bfre Brachyistius frenatus (kelp perch)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:bfre00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138623713 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:bfre03000]
138623713 (arid1ab)
03021 Transcription machinery [BR:bfre03021]
138623713 (arid1ab)
03036 Chromosome and associated proteins [BR:bfre03036]
138623713 (arid1ab)
Transcription factors [BR:bfre03000]
Eukaryotic type
Helix-turn-helix
ARID
138623713 (arid1ab)
Transcription machinery [BR:bfre03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138623713 (arid1ab)
Chromosome and associated proteins [BR:bfre03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138623713 (arid1ab)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
2361 aa
MAAQVASVATLNTSPPSELKKPDRDTQEESVPGEKQHENKEPGPDGGSPGQKELQDGTDA
GNAGGGGDPDMKNGNGNLPRVNNNSSTQNDAGGPEGNNHPGMGHHHPGPFPPPPYGYNQH
YSRAPFHQHGGQQSPGMAAASGPGMMDPYPPNSHEHGYPNHYNNYSPFQNRTSYQGQGYG
AMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNMGNQQPTSTPTLNQLLTSPSS
ARSYPNYPQGDYNNQEGANKGPGDLGSSQYGGVHPGWQQRTHHQPPMSPGNTGQPPNRNQ
PPSPMDQVGKMRGQPYGGPIPYSQQQQQQQQGPPAGPGPQQAGSYAGQGYGPPGPQRYPM
GMQTRTPGAMGGMQYGQQMSTYGQQGPGGYGQQSQGYYGQHGPAPHPGQQQPPYAGQPQG
TSGPPFPQQGHPSQSPGQHGQPGPPYQQSQGPHGPPQGQPPYSQTPQSQPGQPPYVPPQQ
QQQQPQPQQQPQQPQQQQQQGTGPQSQQGPQGPQGPQGQSGYPQPAGPGQPPQQQTPQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGPPQQQQQQQQPGGPSPQAQQPPGHGQQ
GQPSPYSQTPPLQQQQQQQPQQQQQQQQQVSPYQRFPPPPQELSQDSFSSQSSAPPSNQP
NKSGQEDSMQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSP
HTSPHLPGIRGPSPSPVGSPASVTPSRTGPLSPAAVPGNQMPPRPPSVQSDSIMHSSMNQ
SAMGQDRVYMRNPQMPPYGSPGQPGSALSPRQSSGGQMHGGMGPYPQNNTMGNYGPQGAQ
YGPQGRGFDSAHTDTHAAEQKVDTGYPRQPGYTGMPNANYPSGPGMGGSMNPMPGQGSGA
PYGGMPPGRIVPGQMAVRPYGPGMASNMAGMPPQVASGMCPPPGMNRKDGGPSMHHGPTN
SIHNRPPGYPNMSQGMMGTGSPYGPGMNSMHGMMNQGGPGPYPMGASMPNNTPGMAPSSE
FGMEKMTPAPKMNNKVEGTPKPESKKKSSSSTTTNEKITRLYELGPEPERKMWVDRYLAF
AEEKAMGMNNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAAS
SLKKQYIQCLYAFECKIERGEDPPPDFFNTDTKKNQPKIQPPSPAGSGSLQGPQTPQSTS
SSMAEGGDLKPPTPASTPHTQMPPMPGVRSSVNLQDPFADGGDPAFSRRNAMTPNSQGFQ
PGMGGPEMMGRMGPYEASKDPFGGMRKAGEQFMPPGPNSGMAEQYNRGPPGPMANMQMGQ
RQQYPYGYDRRQEPGMGPDGTMGPGAPQPNMMPSGADTGMYSPSRPPPQQRHDSYPNQYP
GQGAPPGGPYPNQQPGMFPQQQPNYKRPVEGGYGPPAKRHEGEIYNVPYSGQQQPGPQPS
GPQGQQDMYNQYNAYPGGDRRPPGPQNQFPFPFGRERGPSSAGPNSQSPMPPQMMASPMP
SGPDGPQGPMWQGRNEMGYPNYPNRQGPPVPGQGPGYHGMNRSEEMMPSDQRMNHEGPWP
GHVNQRQPPFGPAGSGPPMTRPLPSTYQTSQNHIPQVSSPAPMPRPMESRTSPSKSPYMH
PGIKVQKAGPPVPASHIGQAPVQQPMIRRDVAFPPGSLEASQPHLKPRRRLTVKDIGTPE
AWRVMMSLKSGLLAESTWALDTINILLYDDNSITTFNLCQLPGFLELVVEYFRRCLIEIF
GILKEYEVGDPGQRTLIDPNAAEDSDDEIPIPEGEDMDTDEEDEEDEEVEEAKTNADTSS
LVQVKVEEESSQKDKSSEDEEEEKERESSTKEANSSTSGSSQDPNLHSEKPKQASKFDKL
PIKVVRKKNPFLLNHLSKLGQRQSFDSGLIHWSIGGGDTTEHIQTHFESRMELLKQRKRP
PAATESRKKVQAIGTAAENQDKSKSGGEDKARQQPAQSSEPHKSPAEKTPPPPLPIGAPV
TATIDDVLSARPGSVTEEVVRGCAEEQKENGKYLFSINPELQSRRNIKILEDEPHSKDET
PLSTLSDWQDSLARRCICVSNIVRSLSFVPGNDLEMSKHPGLLLLLGRLVLLHHRHPERK
QAPVTYEKEEEEDEGVSCERDEWWWDCLEVLRENCLVTLANISGQLDLSIYPESICLPLL
DGLLHWAVCPSAEALDPFPTLGPHSSLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLE
KLYGSLVRLVGERKVAVCREMAVVLLANLAQGDSLAARAIAVQKASVGNLLGFLEDSLAA
TQYQQSQSSLLQMQGGPQFEPTSVDMMRRAARALHALAKVEENHSEFTLYESRLLDISVS
PLMNSLVSQVICDVLFLIGQS |
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| NT seq |
7086 nt +upstreamnt +downstreamnt
atggccgctcaggtcgcaagcgtcgccactctcaacactagcccgccatccgaactcaaa
aagccggatcgggacacacaggaggagtcggtaccgggggagaaacagcatgaaaataag
gaaccgggacctgacggcggatctccaggccagaaggagctgcaggacgggaccgatgct
ggaaatgctgggggaggaggggatcctgacatgaagaacggaaacgggaatttaccccgg
gtaaataataatagcagtacccagaatgatgcgggcggacccgaagggaataaccatccc
gggatgggacaccatcacccgggcccctttcctccacctccttacggttacaaccagcac
tacagccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggacccttacccccctaattcacacgaacacggctacccgaac
cattacaacaactacagcccgttccagaacaggacttcttatcagggccaagggtacggg
gccatgaattccccgcgtaacaaccagcctccggcggctggggggcagccaggcaagcag
cagccagcaggaggaaccacagctatggctgcctcttataataaccagaggtataacatg
ggaaaccaacaaccgacgtctacgccaactttaaaccagctgctgacgtcgcccagctcg
gccaggagctacccgaactacccgcagggagactacaacaatcaggaaggggccaacaag
ggaccgggggatctgggcagcagtcagtacggtggggtccatccgggttggcaacaaagg
acccaccaccagccccccatgagcccgggaaacaccggacaacctccgaacaggaaccag
cctccaagcccgatggaccaggtagggaagatgcgtggccagccatatggaggacccatt
ccctactcccagcagcagcagcagcagcagcaagggcctcccgccgggcctggaccccag
caggcgggctcttacgcagggcagggctacggacctccgggcccccagaggtatcctatg
gggatgcagacccgaacacctggcgccatgggcggcatgcagtatggacagcagatgtcc
acctatggacagcagggcccaggaggctacggccagcaaagccagggctactacggtcag
catggcccggctcctcaccccggccagcagcagcctccgtacgctggccagccccagggc
acctccggacctcccttcccccagcagggccacccctcgcagtcccctggccaacacgga
caaccagggcccccttatcaacaatcacagggtccccacggccctcctcaaggtcagccg
ccctacagccagaccccacagtctcagccaggacagccaccctacgtccctccccagcag
cagcagcagcagccgcagcctcaacagcagccgcagcagccgcagcagcagcagcagcaa
ggtactggtcctcaaagtcagcagggcccccagggcccccagggcccccagggccagtcc
gggtacccacagcctgctggaccagggcagccaccacagcagcaaaccccacagcagcag
cagcagcagcagcagcaacaacaacaacaacaacaacaacaacaacaacaacagcagcag
cagcaacaacagcagcaacaacaacaacaacaacaagggcccccacaacaacaacagcaa
cagcaacaaccaggaggaccgtctcctcaagcccagcagcctccaggtcatggccagcag
ggtcaaccatcaccttactcccagacacccccactgcaacagcagcagcagcaacaacca
cagcagcaacaacaacaacaacaacaagtgtcaccatatcagaggttcccgcctcctcca
caggaactatcccaggactccttcagctcccagtccagcgctcctccttcgaaccagccc
aacaagagcggtcaggaagacagcatgcaggggcggccatccagtctgccggacctgtcc
ggctccatcgacgacctgcccaccggtacggagggcgccctgagcccgggcgtcagcacc
tcgggggtgtccagcagtcagggcgagcagagcaacccggcgcagtctcccttctccccg
cacacttcgccccacctgccgggcatccgcgggccctcgccatcacccgtgggctccccg
gccagcgtcaccccttcacgcaccggccctctctcccccgctgctgtgccaggtaatcag
atgccgccgcggccgcccagcgtccagtcggacagcatcatgcactcttccatgaaccag
tcagccatgggccaggacagggtgtacatgcgtaaccctcagatgcctccttacgggtcc
cctggacaacctggctccgccttatctccacgccagtcttcgggaggccagatgcatggt
gggatgggaccttatccccagaacaataccatgggaaactacggccctcagggggcccag
tacggcccacaagggcggggctttgactcggctcacactgacacgcacgcagcagaacag
aaggtggacacaggttatcccaggcagcccggctacacggggatgcccaacgccaactac
cccagcggccccggcatgggaggctccatgaaccccatgcccggtcagggcagcggggct
ccgtacggaggcatgcctcctggcaggatagttcccgggcagatggctgtccggccctac
ggccccggcatggcctccaacatggccggcatgcctcctcaggtggcctccggcatgtgc
ccccctccgggcatgaacaggaaggacggtggcccctccatgcaccacggacccacaaac
tccatacacaacaggccgcccggctacccgaacatgtcccagggcatgatgggaacaggc
tctccgtacggcccaggcatgaacagcatgcacggtatgatgaaccagggagggcccggg
ccttatccgatgggagcgagcatgcccaacaacacccctggaatggctcccagttcggag
tttggcatggagaagatgaccccggccccgaaaatgaacaacaaagtggaagggactccc
aagccggagtctaaaaagaagtcaagctcttccaccaccactaatgagaagatcactcgt
ctgtacgagctcggcccggagccagagaggaagatgtgggtggaccggtacctggccttc
gccgaggagaaggccatgggcatgaacaacctgcccgccgtgggccgcaagcctctcgac
ctcttcaggctctacgtgtccgtcaaagagatcggcggcctcacgcaggtgaacaagaac
aagaagtggcgggagctggccaccaacctgaacgtgggcacgtcgagcagcgccgccagc
tcgctcaagaaacagtacatccagtgtttgtacgccttcgagtgcaagatcgagcgcggc
gaggacccgcctccggacttcttcaacacggacaccaaaaagaaccagcccaagatccag
ccgccgagcccagctggatccggatccctgcaaggaccccagactccacagtccaccagt
agttcgatggcagaggggggagacctgaagccccccaccccggcctccaccccgcacacg
caaatgcctccaatgcccggcgtcaggagtagtgttaatctgcaggaccccttcgccgat
ggcggagacccagccttctccagaaggaacgccatgactcccaactctcagggcttccag
cccgggatgggcggcccggagatgatggggcggatgggtccctacgaggcctccaaggac
cccttcggaggcatgaggaaagctggagaacagttcatgccgccgggccccaacagtgga
atggcggagcagtacaacagaggcccaccgggcccaatggccaacatgcagatgggccag
agacaacagtacccatatggatatgaccgaagacaggagccaggtatgggccctgacggc
accatgggaccaggagctcctcagcccaacatgatgccttctggagcggacacagggatg
tactcgccgagccgtcctccaccacagcaacggcatgactcttatccaaatcagtaccct
ggccaaggagctccccctggtggcccgtacccgaatcaacagccaggaatgtttccacag
cagcaaccgaactacaagcgtcctgtcgagggagggtacggtcctccagccaagcgccat
gagggagagatttacaacgttccttacagcggtcagcagcagccaggaccgcagccctcg
gggccccagggccagcaggacatgtataaccagtacaacgcgtaccctggaggggaccgc
agaccaccaggcccacagaaccagttccccttcccttttggacgggagcgagggccgtcg
tccgccggccccaattcccagtctcctatgcctccccagatgatggccagccccatgcct
tcgggtcccgacggcccccagggcccaatgtggcagggccgcaatgagatgggctatccc
aactatcccaaccgacagggacctcctgtaccgggccagggtcccggctaccacggcatg
aaccgctcagaggagatgatgccatcagaccagcgcatgaaccacgaggggccgtggccc
ggacacgtcaaccagcggcagccgccgttcggtcccgccgggtccggaccgcccatgacc
agacccctgccctccacctaccagacttcccagaaccacattcctcaggtgtcgagccca
gcgcccatgccgcgtcccatggaaagcaggacgtcgcccagcaagtcgccctacatgcat
cctggcatcaaggtgcagaaagcgggccctccagtgcccgcctcccacatcggccaggcc
cccgtgcagcaacccatgatccggcgagatgtggccttccctccgggctccctggaggcg
tcccaaccccacctcaaaccccgcaggcggctcaccgtcaaagacatcggtactcctgag
gcttggagagtaatgatgtcactaaagtcaggcctgttagctgaaagcacctgggccttg
gacaccattaacattttactgtacgacgacaatagcattactactttcaacctgtgccag
ctacctggtttcttggagctggtggtggagtacttcagacgctgcctcattgagatcttc
ggcatcttgaaggagtacgaagtaggagaccccggccagcgcaccctaatagaccccaac
gcagcggaggactcggatgacgaaatccccattcctgagggcgaggacatggacacggac
gaggaggacgaagaggacgaagaggtagaggaagccaagaccaatgccgacacctcctcg
ctggtccaggtgaaagtggaggaggagagctcccagaaagataagtcttcagaggatgag
gaagaggagaaggaaagggagtcctctaccaaggaagccaatagctctacctcagggtcc
tcccaggaccccaacctccactcggaaaagcccaagcaggctagcaagtttgataaactt
cccatcaaggtggtgcggaagaagaaccccttcctgttgaaccacttgtccaagctgggg
cagcggcagagcttcgacagcggcctgatacactggagcatcggtggtggcgacactact
gagcacatccagacccacttcgagagccggatggagcttctcaagcagcggaaacgcccg
ccagcagccaccgagagccgcaagaaggtccaggcgatcgggacggccgcagaaaaccaa
gacaaatccaagtccggcggggaggacaaggcccgacagcagccggcccagtcctctgaa
cctcacaagtctccggcggagaagaccccgcctcctcctcttcccattggcgcgccagtc
actgccaccatcgacgatgtactatctgcccgcccggggtcggtcacagaggaagtggtt
cgcggatgtgctgaggagcagaaggagaacggcaagtacctgttcagcatcaacccggag
ctccagagccgccgcaacatcaagatcctggaagacgagcctcacagcaaggacgagacg
ccgctcagcaccctgtcggactggcaggactctctagcccggcgctgcatctgcgtttcc
aacatcgtgcggagcctctccttcgtccccggcaacgacctggagatgtcgaaacacccg
ggcctcctgctgctgctgggccgcctggtgctgctccaccacaggcaccccgaacgcaaa
caggcgccggtcacctacgagaaggaggaggaggaagacgagggcgtgagctgcgagaga
gacgagtggtggtgggactgcctcgaggtgttgagggagaactgcttggtcactctggcc
aacatctcgggccagctggacctttctatctacccggagagtatatgcctgccgctgctg
gacggcctgctccactgggccgtgtgcccttcggcggaggccctggaccccttccccacg
ctggggccgcacagctccctttcgccccagagactggtcctcgagaccctcagcaagctc
agcatccaggacaacaatgtcgacctcattctggcaacgccgcccttcagccgtctggag
aagctctacggctcgctggtgcgcctcgtcggcgagcgcaaggtggccgtgtgccgggaa
atggcggtcgtcctgctggctaacttggcccagggcgacagcctggcggcgcgggccatc
gccgtgcagaaagccagcgtggggaacctactgggcttcctggaggacagcttagcggcc
acgcagtaccagcagagccagagctccctgctacaaatgcagggcgggccccagtttgag
cccacgagcgtggacatgatgcggcgggcggcgcgcgccctgcacgccctggcgaaggta
gaagaaaaccactcggagttcacgttgtacgagtcgcggctactggacatctcggtgtcc
ccacttatgaactctctggtgtcccaagtaatctgtgacgtactgtttctgattggccag
tcatga |
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