Brachyistius frenatus (kelp perch): 138623849
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Entry
138623849 CDS
T10614
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6 isoform X1
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfre04121
]
138623849 (rnf6)
Enzymes [BR:
bfre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138623849 (rnf6)
Ubiquitin system [BR:
bfre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138623849 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
138623849
NCBI-ProteinID:
XP_069559712
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MEIDSSRVNGPTALFMVMDPPGGGDERRRQAERLRREEAYYHFINELSEEEYRLMRDSNL
LGTPGEVTAEELRQRLDGAKERVSSQPRTEQRSQTADSGEQQSSSSEGEERGAAGRRGAG
GSEPAAETSNGDSLLEWLNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININ
HDQPEPGEHNDTVDTAELPVTAPNTTSPSIRTTSSFTNSRPSTTTPRPVPYPSPRPAISR
RMQTRRTRSSTTTLSMSPPALPPPAAPPAAAQRRGATLHTIVPPPTVPNPPLDQTTSLQH
QALNVEVEQGRDDTSASVDFSRVSPQSGSQAPAVGHESRGSRTRSRGRARRAASGSGVSS
RLSRRSRSPLHRIPVDSTPPPSSSGVGGAIIHTVEAGSGTTSVSMETGEAVSEPAVLTEP
AAETGERESESHAIGAGSSAVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARVAEN
TVTFESDSGGFRRTISRSERAGIRTYVSTIRIPLRRISETGLGEPNSTALRSILRQIMTG
FGELSSLMETEADSETVAPSHADAGGTHGNTSPASRLHTNESSPGQVVTGGVVQERVGLV
GSEEDQGGQPRLGGGAVVSTTDGRATSRDTNNLVENGTLPILRLAHFFLLNDEEDDEHPR
GLTKEQIDNLSTRTYGQASLEGEMGRACSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLS
ENNTCPICRQPILAVHHD
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgacagttccagagtcaatggaccgacagcactcttcatggtgatggaccct
cctggtgggggagacgaacggcggaggcaggcagagcgtcttcgacgggaggaggcatac
tatcacttcatcaatgaactgagtgaagaggagtaccggcttatgagagacagcaaccta
ctgggcacacctggtgaggtgactgctgaggagctccggcagcgtctggacggcgctaaa
gagcgcgtgtcatctcagccccgtactgagcagcgctcgcagaccgccgattcaggagag
cagcagagcagtagcagtgagggagaggagagaggggctgcagggagacggggggcaggg
ggctcagagcccgcagcagaaacctccaacggtgactcattattggagtggctgaacaca
ttcagacgcactggtaacgctactcgcagcgggcagagtggcaaccagacgtggcgcgcc
gttagtcggaccaaccccaacagtggagaattccgttttagcctggagatcaacatcaac
cacgatcagccggagccgggggagcataatgacactgtggacactgcagagctgccagtg
actgcccctaacacaacctcaccctctatacgtacgacttcctccttcaccaactcccgc
ccttcgaccaccacgccgaggccagtcccgtacccctccccccgcccagccatcagcagg
aggatgcagacacggcgcacgcgcagcagcactactacactttctatgagcccccccgca
cttcctccgccggcggcccccccagctgctgctcaaaggagaggtgccactttgcacact
atagtaccacctcccactgttcccaatcctcctctcgatcaaactacatctttgcaacat
caagccctgaatgtagaagtagagcaggggcgagatgatacgtctgcttctgtagacttt
tcccgggtgtccccccagtctgggtcacaggccccagcagtgggacatgaatctcgtggc
agtaggactagatcacgcggtcgtgcacgcagggctgcatcaggaagtggggtttcatct
cgtttgtcaagacgaagtcgttcccctttgcacagaatacccgttgatagtacccctccg
ccatccagcagtggcgttggtggcgctatcatacatactgttgaagcaggcagtggcacg
acctccgtgtcgatggagaccggcgaggctgtgtcagaacctgctgttctaacggagccg
gccgcagagacaggagaacgcgagagtgaatcgcatgcaataggagcaggaagttctgca
gtgcgacggcacccaactatcatgttggatctgcaagtgagaaggatccgaccaggtgag
aaccgcgaccgggacagcatcgctagcagaacacgatctcgtgctcgggtcgctgaaaat
actgtcacatttgaaagcgacagtggcggatttagacgcaccatctcccgctctgagaga
gctgggatccgcacttatgtgagcactatccggattccgctgaggcgcatcagtgagacg
ggactgggggaacccaactccaccgccctacgttctatcttgcgccagattatgactgga
tttggggagcttagctccctgatggagaccgaggctgattctgaaacggttgccccgagc
catgcagatgccggtggtacacacggtaacaccagtcccgccagtcgtctccatacaaat
gagagttcacctggccaggttgttacaggtggggtcgtgcaggagagggtggggctggtg
ggaagcgaggaggaccagggtgggcagcccagactcggaggaggagcggtagtgagcacc
acagacggacgggccaccagcagagacaccaacaacctggtggaaaacgggactctaccc
atcctgcggttggcacacttctttttgctcaacgatgaggaggatgacgagcatcctcgg
ggcctgaccaaagagcagattgacaatctatccacgcgtacctacggtcaggccagcctg
gaaggggagatgggtcgtgcatgcagtgtgtgcatcaacgagtatgcccagggcaacaag
ctgcgccgcctgccctgctcccatgaattccacatccactgcatcgaccgctggctctcg
gaaaacaacacctgccccatctgtaggcagcctatacttgcagtgcatcatgactga
DBGET
integrated database retrieval system
