Brachyistius frenatus (kelp perch): 138624560
Help
Entry
138624560 CDS
T10614
Symbol
pcdh10a
Name
(RefSeq) protocadherin-10a isoform X1
KO
K16499
protocadherin delta 2
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bfre04515
]
138624560 (pcdh10a)
Cell adhesion molecules [BR:
bfre04515
]
Cadherins
Protocadherins
138624560 (pcdh10a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
DUF4621
DUF4832
Motif
Other DBs
NCBI-GeneID:
138624560
NCBI-ProteinID:
XP_069560962
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MIWFFFLLSVLDGAVSQLHYSVPEEQEPGSVVGNIAEDLGLDITKLSTRRFQTVPSSRTP
YLEVNLENGALVVKEKIDREEICKQTIPCLLHLEVFLENPLELFRVEIEVMDINDNPPSF
PETDISVEISESAIPGTRFPVENAFDPDVGSNALSTYAITNNNYFYLDVQTQSDGNKFAE
LVLEKPLDREQQAVHRYVLTAVDGGIPQRTGTALLVVKVLDSNDNAPTFDQSVYTVNLRE
NSPVGTLVIQLNATDVDEGQNGEIVYSFSSHNTPRIKDLFNIDGRTGRIEVAGEVDYEES
NTHQIYVQAKDLGANAVPAHCKVLVKLVDVNDNTPEIGFSTVTESVSEQDAPGTVIALFS
VADRDSGDNGQMSCEILGDVPFKLKSSFKNYYTIVTDGPLDRENTDSYTITVVAKDKGQP
SLATSKSIKVHVSDENDNAPRFTQAVYDVYVTENNVPGAFIHAVSALDPDIGQNALITYS
ILECDIQGMSVDTYVSINQDTGYLYALRSFDYEQLKEFSFMVQAKDSGAAELFSNATVNV
IIVDQNDNAPSVIAPIGKNGTAKEHLPRSAEPGYLVTRIVAMDADDGENARLSYSILRGN
EMGMFRMDWRTGELRTARRISPKRDPQGYYDLLIEVRDHGQPPLSSSASVSVVLVDSVVE
GRSGDRGSASKAKETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNLYTCLLAG
DCCLCCGSCCSRQARGRKQKKLSKSDIMLVQSTNVTSGVGPVGQVPVEESGVGGVGGGFG
SHHHQNQNSYCYQVCLTPESAKTDLMFLKPCSPSRSTDTDHTNPCGAIVTGYSDQQPDII
SNGSILSNETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNR
GHSAGADLFSNCTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDATLPDTEVP
SSVNLPDQLTMTSSAASSNDRSFSTFGKDGQRSQSHHSLHHHLHQQQQQQQQQQQQQQQY
SSSTLERKEYDRGTLPYKPTFLSRKRIC
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgatttggttctttttcctgctctccgtcctggatggagcggtctctcagcttcactac
tccgtgccagaggagcaggaacctggctctgtggttgggaatattgcggaggatttgggg
ctggacatcaccaaactttccacccgccgcttccagacggtgcctagttcacggacacct
tatctggaggtgaacttagagaacggcgcgctcgtggtgaaggagaaaatcgacagggaa
gaaatctgtaagcagactattccgtgcctattgcacctagaggtgtttctggaaaacccg
ctggagctctttcgcgtggagatcgaggtgatggatatcaacgacaatccacccagcttt
cccgagacggacatttccgtggaaatatcagagagcgcgattcccgggacacgtttcccg
gtggagaatgccttcgaccctgacgtgggctcaaacgcgctcagcacatatgccataacg
aataataactatttttacctggacgtgcagacgcagagcgacgggaacaagttcgcggag
ctggtcctggagaagccgctggaccgagagcagcaggcggtgcaccgctacgtgctgacg
gctgtggacgggggcatccctcagcggaccggaacggctctcctggtcgttaaagttctg
gactctaacgacaacgcgcccacctttgaccagtcggtgtacacggtcaacctgcgggaa
aactcccccgtgggcactctggtcattcagctcaacgccacggacgtggacgagggacaa
aacggggaaatcgtttattccttcagcagtcacaacaccccgcggataaaggacttattc
aatattgatggcaggacggggaggatcgaggtggcgggcgaggtggactacgaagagagc
aacacgcaccagatttatgttcaggctaaagatctgggggccaatgcggtccccgcgcac
tgcaaagtgctggtcaaactcgtggacgtgaacgacaacacgccggagatcggtttcagc
actgtgaccgagtccgtgagcgagcaggacgccccgggcaccgtgatcgcacttttcagc
gtcgccgaccgggactccggtgacaacggccagatgagctgcgagatcctgggagacgtt
cctttcaagctgaaatcctctttcaaaaactactacaccatcgtgacggacggacctctg
gacagagagaacaccgattcgtacaccatcaccgtggtggccaaagataaaggtcagcct
tcactcgcgaccagcaagtccattaaagtgcacgtctcggatgagaacgacaacgcgccc
cgttttacgcaggcggtttatgatgtgtacgtgactgagaacaacgtgcccggtgctttc
attcacgctgtgagcgcgttggaccccgatataggacagaatgcgctcattacctactcc
atattggagtgtgacatacagggcatgtctgtggacacgtatgtatccataaaccaggac
accggctacctttacgcgctgcgctcctttgattacgagcagctgaaggagtttagcttt
atggtccaggctaaggactcaggtgctgctgagctcttctccaacgccactgtgaatgtg
atcatagttgaccaaaacgacaacgctccctctgtcatagcccctattggtaaaaacggc
acagccaaagagcacctgccgcgctctgccgagcctggctacctggtcacgcgcatcgtg
gccatggatgcggatgatggtgagaacgcacgcctgtcctacagcattctgcggggcaac
gagatggggatgttccgcatggactggaggacaggagagctgaggacggcccgcaggatc
tctcccaagcgggacccgcagggctactacgacctgctgatcgaggtgagggaccacggg
cagccccccctctcctcctccgccagcgtgagtgtagtattagtggacagcgtggtcgaa
ggccgcagcggggatcgcggctcagcctccaaggcaaaagagacctcccttgacctcacc
ctcattctcatcatcgccctgggctccgtttccttcatctttctcctggccatgatcgtg
ctggccgtgcgctgccaaaaggacaagaagctcaacctgtacacgtgcctgctcgccggc
gactgctgcctgtgctgcggctcgtgctgcagcaggcaggctcgtggccggaaacagaag
aaactgagcaagtccgacatcatgttagttcagagcaccaacgtgacgtcaggggtcggg
cccgtgggtcaggtgcccgtggaggagtctggtgtgggcggcgtgggaggggggttcggc
tcgcaccaccaccagaaccagaactcctactgctaccaggtgtgtctgacaccggagtcc
gccaaaacggatctgatgttcctcaaaccgtgcagcccctcgcgcagcacggacacggat
cacaccaacccctgcggcgccatagtcaccggttacagtgaccaacagccggacatcata
tctaacggcagtattctctctaatgagacaaaacaccaacgagcagagctcagctacctg
gtggacagacccagacgtgtcaacagttcggctttccaagaggccgacatcgtcagctcc
aaagacagcggtcatggtgacagcgagcagggcgacagtgaccacgatgccacaaaccgg
ggtcactcagccggcgccgacctgttctccaactgcacggaggagtgtaaggccctgggt
cactcggaccgctgctggatgccgtccttcgtgccgtcggacgggcgccaggggccggac
taccgcagcaacctgcacgtgcccggcatggacgccacgctgcccgacactgaggtaccc
tcctccgtcaacctccctgaccaactcaccatgacctcgtccgccgcctcgtccaacgat
aggtcattctccacctttggcaaggacggccaaaggtcacagtcacaccacagccttcac
catcacctccatcagcaacagcagcagcagcagcagcagcagcagcagcagcagcagtac
agctccagcacgctagagaggaaagagtatgatagggggaccctaccatacaaacccacc
tttctctcccgcaaaaggatttgctag
DBGET
integrated database retrieval system
