Brachyistius frenatus (kelp perch): 138624575
Help
Entry
138624575 CDS
T10614
Symbol
rnf38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfre04121
]
138624575 (rnf38)
Enzymes [BR:
bfre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138624575 (rnf38)
Ubiquitin system [BR:
bfre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138624575 (rnf38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
138624575
NCBI-ProteinID:
XP_069560980
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MPIAAAGQPTTREPRVCPRLPSTPEPVPKGADLFDEAGAAESAERTEYGGAEGGRGLGGY
SYSQSGARGFVPAGSTNGSPPQSPAASSSFLFHPLHPHHLAMEPPRTRSRSRSGYYQQFG
VGNGSGITGNGLMVSNPHHHHHHHHHNNNHHNNHHQQQQQQHQQQQLYPQQQQQQHGAGC
APLGAHGNHSENQHRAPGSNTSPGIQRLSSVPGAHHRIPAAGASGGSYHCHPDLAYGDES
DKSEESPSPKRQRLSSQSVLEQLTSSAPPPSTPSPPIRPWESGPQTRRQPHPHTHYHQER
CLTPARHRRSPPARRQRGRLSRPSRHPPPHHHPSTQGPAPRLSPSELQDENYHHNSHPSA
HLTYPTHTPGAYAQPPAAGGGAAGPEEPRAFHPPALSPRLLHPAAHHHHHHHHQQQQQQH
QQHQQHQHQHQQHHATQHQQGAMVMDLHEQLQQGSVPVSYTVTPVPPHGLAAPLCSGQHL
PPTCSSQQQVPACSVVFSTGQHYHPMLQACSMQHLPVPYAFPSLLSSDTQFLLPPPPHLS
HHPPHLPTPGQFLPFQTQQPRSPLQRIENEVELLGDQLSLGGGFSYAHHHHHHHHHQPPS
TLPPSTPLQFLSHHDPLSQELFTVPYPHFMPRRFTSRRYRSQQAVPPSPYHPSFLPYFLS
MLPMPPNVAPAISLELDVDDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPN
NHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVQRDS
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgcagccgctggacagccaacgactcgggagcccagagtttgcccccggctg
ccctccaccccggagcctgtccctaaaggggctgatttattcgacgaggcgggggcggcg
gagtctgcggagcgaacggagtacgggggcgcggaggggggcagaggactcgggggctat
agttacagccagagcggcgcgaggggctttgtaccggccggatccaccaacggctctccg
ccgcagtccccagccgcgtcctcctcttttctcttccatccccttcacccgcaccacttg
gccatggagcccccgaggactcgatcgcgttctcggtctggatattaccagcagttcggc
gttgggaatggcagtggaataaccggcaacggacttatggtatccaacccccatcaccac
caccaccaccaccaccacaacaacaaccaccacaacaaccaccaccagcagcagcagcag
cagcatcagcagcagcaactatatccacagcagcagcagcagcagcacggtgccggttgc
gcaccacttggagctcacggcaaccactcggagaaccagcatcgagccccaggaagtaac
acctcacccggcattcagaggctatcatctgttcccggagcgcaccaccgcatcccggcg
gcaggagcctccggtgggtcctaccactgccacccggacctggcgtacggagacgagagc
gacaagagtgaggaaagccccagtccgaagcgccagaggctgtccagtcagtctgttttg
gagcagctgacctcctccgcccccccaccgtccaccccttctccccccatccgcccctgg
gagtcgggaccccaaactcggaggcagcctcacccccacacgcattaccaccaggagaga
tgcctcacccccgctcggcacagacgcagcccaccggcgaggcgtcagcgcggccgactc
tcccggccctcccgtcacccgcccccccaccaccacccctccacccaaggccccgcgcct
cgcctgtcgccgtcggagctccaggacgaaaactaccaccacaactcccatccctccgcc
cacctgacgtacccgacgcacacccccggcgcctacgctcagcctcccgcggccggcgga
ggagcggccggtccggaggagccccgagctttccaccctcccgccctgtcgccacgacta
ctgcacccggccgcccaccaccaccaccaccaccaccatcagcagcagcagcaacagcat
cagcagcatcagcagcatcagcatcagcatcagcagcatcatgcaacacaacaccagcaa
ggagcgatggtcatggacttgcacgaacagctgcagcagggcagcgtgccggtgtcctac
acggtgacacccgtacctcctcacggcctcgcggcgcctttgtgtagcggtcagcacctt
cccccgacctgctcctcacaacaacaggtccccgcctgcagcgtcgtcttcagtaccgga
caacattaccacccgatgctacaggcgtgttcaatgcaacatttgccggtgccctacgcc
tttccgtctctgctctccagtgacactcagttcctgctcccccccccacctcacctctct
caccacccgccgcacctccccacgcccggacagttcctgcctttccagacgcaacagccg
cgatcgccgttacagaggatcgaaaatgaggtggagcttcttggggaccagctttcgttg
ggcggcggcttcagctacgcccaccaccaccaccaccatcaccaccaccagcctccctcc
accctgccgccctccacaccgctccagttcctctcgcaccacgaccctctgtcgcaggag
ctttttaccgtgccctatccccactttatgcctcgccggttcacgagccggcggtaccgc
tcccagcaggccgtgcccccgtctccctaccaccccagcttcctgccttacttcttatcc
atgcttcccatgcccccgaacgtagcccccgctatcagtctggagctggacgtggatgac
ggagaggtggagaactacgaggccctgctgaacctcgcggagcgtctcggagaggccaag
ccccgaggtctcaccaaggccgatatagagcagcttccttcatacaggttcaaccccaac
aaccatcagtctgagcaaacactgtgtgtggtgtgtatgtgtgacttcgagtctcgccag
ctcctccgggttttaccctgtaaccacgagttccacgccaaatgtgtggacaagtggctc
aaagccaaccggacctgtcctatctgtcgagccgacgcctccgaggtgcagcgggactct
gagtga
DBGET
integrated database retrieval system
