Brachyistius frenatus (kelp perch): 138624739
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Entry
138624739 CDS
T10614
Symbol
rxraa
Name
(RefSeq) retinoic acid receptor RXR-alpha-A isoform X1
KO
K08524
retinoid X receptor alpha
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03320
PPAR signaling pathway
bfre04148
Efferocytosis
bfre04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
138624739 (rxraa)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
138624739 (rxraa)
03320 PPAR signaling pathway
138624739 (rxraa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfre03000
]
138624739 (rxraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bfre03310
]
138624739 (rxraa)
Transcription factors [BR:
bfre03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
138624739 (rxraa)
Nuclear receptors [BR:
bfre03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
138624739 (rxraa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
138624739
NCBI-ProteinID:
XP_069561313
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All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
METKPFLSLGFLKPQCSLAPPMQRGRSGEVCSCFSGVCPLHQRRLSSDSSGHVTSSPLGS
PTSHRGMHPSLLSPTSMGPSGSLHSPISTLSSPMNGLASPFSVISSPMGPHSMNSPGMGY
GPSVSPQVRPLNSPMNSVSSTEDIKPPLGLNGVMKVPAQPSGTMLSLTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCMIDKRQRNRCQYCRYQKCLAMGMKRE
VLLHAAVQEERQRAKDRNENEVESTSCANEDMPVEKILEAEQAVEPKTETYIETNLGVPS
NSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSI
SVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP
DSKGLSNPGEVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaaccgttcttgtcactggggttcttgaagccccagtgctcgttggctcct
cccatgcagcgaggtcgctcaggtgaggtgtgttcctgcttcagcggcgtgtgtcccctc
catcagcgtcgcctctcctcagattcgtcgggtcatgtgacctcctcaccgctgggctcg
cccacatcccaccgggggatgcacccgtctctgctcagcccaacgtccatggggccctcc
ggctctctccactcacccatcagcacgctgagctcacccatgaacggcctggcctccccc
ttctccgtcattagctcacccatggggccccactccatgaactcacctggcatgggctac
ggccccagcgtcagcccccaggtaaggccactgaactcgccgatgaactcggtcagcagt
acggaggacattaagcccccgctgggtctcaacggcgtgatgaaggtgcccgcccagccc
tcgggcacgatgctgtcgctcaccaaacacatctgcgccatctgcggtgatcgctcctca
ggtaaacactacggcgtgtacagctgtgagggctgcaaaggcttcttcaaaaggaccgtg
cgcaaagacctgacctacacctgtcgcgacaacaaagactgcatgatcgataaacgccag
aggaaccgctgtcagtactgtcgctaccagaagtgtctagccatgggcatgaagagagaa
gttttgttacatgcagccgttcaggaggagcgccagcgagccaaggacaggaatgagaac
gaggtggagtccaccagctgcgccaacgaggacatgcccgtggagaagatcctggaagct
gagcaggcggtggaacccaaaaccgagacctacatcgagaccaaccttggcgtgccatcc
aactcgcccaacgacccagtgacaaatatctgtcaagcagctgacaaacagctcttcacc
ctggtggagtgggccaagaggatcccccacttctctgagctgccgctggacgaccaggtc
atccttctacgagcaggttggaatgaactcctcattgcatcattctcgcaccgctcgata
tcggttaaagacgggattctgttggcgacggggctgcatgtccaccgcaacagcgcccac
agtgccggagtgggagccatcttcgacagagtgctcacagaactggtgtctaagatgagg
gatatgcagatggataagacagaactggggtgccttcgagctattgtccttttcaaccca
gactctaaaggtctgtccaacccaggtgaagtcgaagctctgagagagaaagtctacgcg
tctttagaggcctactgcaaacagaagtaccccgagcagccgggcaggtttgcgaagctg
ttgctgcggttaccggcactgcgctccatcgggctgaagtgtctggagcacttgttcttc
ttcaagctcatcggcgacacgcccatcgacactttcctcatggagatgctagaagccccg
catcaaatgacataa
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