KEGG   Brachyistius frenatus (kelp perch): 138624864
Entry
138624864         CDS       T10614                                 
Symbol
wdhd1
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding protein 1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
bfre  Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:bfre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bfre03036]
    138624864 (wdhd1)
Chromosome and associated proteins [BR:bfre03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    138624864 (wdhd1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Beta-prop_THOC3 Ctf4_C Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st HMG_WDHD1 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st WDR90_beta-prop_4th HMG_box WDR55 Beta-prop_HPS5 eIF2A WD40_Gbeta Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st PROPPIN NBCH_WD40 Tricorn_2nd HMG_box_2 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 138624864
NCBI-ProteinID: XP_069561527
LinkDB
Position
Unknown
AA seq 1135 aa
MPCERKSMRYGHSEGHTEVCFDDTGKFIVTCGNDGDVRIWKSLDDDDPKFITVGEKAYSL
ALKNGKLVTAGSSNTVQIHTFPDGDPDGILTRFTTNATHVTFNASGSRVAAGSSDFMVKV
VEVADSSRQKTLRGHEAPVLSVTFDPKDEFLASSSCDGSVAVWNIEQQTQLLSWPLLQKT
NDVSDAESLCRLAWQPGAAEFLAVPVETKVHLYERGSWDHVSSLSDDTLTQPVNVVVWSP
CGRFLAAGGVGGSLTVWDVSSKLCVERQKHEKGFTVCGLAWHPSGDQIAYTDTEGCLGLL
DGLGSSRSDAGATEAAAKKPAKDYDALFDDDDDDDRFLDEGLSDTKSPAKEAVAGDDDDD
DFLMPATGRVRNRAAILDDENSRDAGSLKLGPEKFNDDDGGDDDDDAGSSVVPAPPPLRP
VYDGPLPTPPQKAFQPGSTPAHLTHRFMMWNSVGIVRGYNDEQDNAIDVEFHDSAVHHAM
HLTNSLGHAVADISQEAVLLGCPSTDELASKLQCLHFSSWDTNKEWLVDLPPGEDVRALC
LGHGWAAVATSALMLRLFSIGGVQREICSLPGPVVCLSGHGEQLLIVYHRATGFDGEQAL
GVQLLQLGRRKRRLIGGEPLPLSRRAHLSWLGFTAEGTPCYVDSDGAVRMLNRSLGNAWT
PVCNLRETCKSKSDHYWVVGVHENPQQLRCIPCKGSRYPPTLPRPAVAILPFKLPLCQTG
TEKGQMEEQFWRSVLFHNHYSFLSSSGYEIDEDGQNRAQKEQQELLMKMFALSCKLEREF
RCVELAELMTQNAATLAIRYASRSRRMALAQRLNEIALEKANQEEEEEEEQEEEAVYSDV
RRTAGYGQTRAGRHGNRHNQEEEEGEVGEEEDGQEMETDEATETKTRVNPFTKDADSPVK
SSPTTVGKAGRTNPFKAAGSRNPYSSSSSSSSGQPRATNILDNMTSSRKSAPLGGSAGKP
NKNPVLKPLAPRPKTKTQSTLLQMTVSKAASKKTPESVEPAADRPKRADVPPPAAPPENA
ENKRPRTGFQLWLEENRESIVADRPDLEETDVIKEAMGRFRTLSADERLSWTERAKGQTG
DAADLKKRKRAGGGGGGGGGEEDEKETAKADENSAKKKKALDPSSKLSAFAFNKN
NT seq 3408 nt   +upstreamnt  +downstreamnt
atgccgtgtgagaggaagtcgatgcgctacgggcactcggagggacacaccgaggtctgc
ttcgatgacaccggcaagttcatagttacctgcggaaacgacggagacgttcggatatgg
aaaagtctggacgacgacgatccgaagttcatcaccgtcggggagaaggcgtactctctg
gcgctcaagaacggaaagctggtgacggccggctccagcaacaccgtgcagatccacacg
tttcccgacggagacccggacggcatcctgacccggttcacgaccaacgccacacacgtc
accttcaacgccagcggctcgcgggtcgccgcgggatccagtgacttcatggtgaaggtg
gtggaggtggcggacagcagccggcagaagacgctccgcggtcacgaagcgccggtgctc
agcgtgacctttgaccccaaagatgaattcctggcctcgtccagctgcgacggctccgtc
gcggtgtggaacatcgagcagcagactcagctgctcagctggccgctgctgcagaagacc
aacgacgtcagcgacgccgagtctctgtgtcggctggcctggcagcccggcgccgccgag
tttttagccgttcccgtagaaaccaaggtgcacctgtacgagcgagggagctgggaccac
gtgagctcgctgtcggacgacacgctgacgcagcccgtcaacgtggtggtctggtcgccg
tgcggtcgcttcctggcggccggcggcgtcggaggttcgctgacggtttgggacgtgagc
agtaagctgtgtgtggagaggcagaagcacgagaagggcttcacggtgtgcggcttggcg
tggcatccttcgggcgaccagatcgcctacacggacaccgagggctgcctcggcctgctg
gacggactcggctcctccaggagcgacgccggcgccaccgaggcggcggcaaaaaaaccc
gccaaagactacgacgcccttttcgacgacgacgatgacgacgaccggttcctggacgaa
ggcctcagcgacaccaagtcgcccgcaaaggaagcggtcgccggggacgacgacgacgac
gacttcctgatgccggcgacggggcgggtgaggaacagagcggcgatcctggacgacgag
aactcgcgagacgcgggatccctgaagctcggtccggagaagtttaatgatgatgatggt
ggtgatgacgacgacgacgccggcagctcggtggttcccgcccccccgccgctgcgcccc
gtctacgatgggccgctcccgactccgccgcagaaggccttccagcccggctccaccccc
gcacacctcacccaccgcttcatgatgtggaactcggtcgggatcgttcgcggctacaac
gacgagcaggacaacgccatcgacgtggagttccacgactcggccgtgcatcacgccatg
cacctcaccaactcgctgggacacgccgtggccgacatttcccaggaggccgtgctgctg
ggctgccccagcacggacgagctcgccagcaagctgcagtgcctccacttctcgtcgtgg
gacaccaacaaggagtggctggtggacctcccgccgggcgaggacgtgcgagcgctgtgt
ctcggtcacggttgggcggccgtcgccaccagcgcgctgatgctccgcctcttttccatc
ggaggagtccagagagaaatctgcagcctgccgggacctgtggtgtgtttgagcggccac
ggagaacagctgctcatcgtataccaccgagccacaggtttcgacggcgagcaggcgctg
ggcgtccagctgctgcagctcggccgcaggaagagacggctcatcggcggcgagcccctc
cctctctcccgccgggcccacctgtcctggctcgggttcaccgccgagggcaccccgtgc
tacgtggactcggacggggcggtgcgcatgctgaaccgctcgctgggcaacgcgtggacc
cccgtgtgcaacctcagggagacctgcaagagcaagtcggatcactactgggtggtcggc
gttcacgagaacccgcagcagctcaggtgtatcccgtgtaaaggctcccggtatcctccc
accctgcccagaccggccgtggccatcctgcccttcaagctgccgctgtgtcagaccggc
acggagaaggggcagatggaggagcagttctggcgttcggtcctcttccacaaccactac
agcttcctgtcctccagcggctacgagatcgacgaggacggacagaaccgggcccagaag
gagcaacaggagctgctcatgaagatgtttgcgctgtcctgtaagctggagcgagagttt
cgctgcgtggagctggcggagctgatgactcagaacgcggcgactctggccatccggtac
gcgtcccggtccagacgcatggccctcgcccagcggctcaacgagatcgccctggagaag
gccaaccaggaggaggaggaggaggaggagcaggaagaggaggcggtgtactccgacgtc
aggcggaccgccgggtacggccagaccagggcaggtcgtcatggcaacagacacaaccag
gaggaagaagaaggagaggtcggggaggaagaggacggacaggagatggagacagacgag
gccacggaaaccaaaacacgtgtgaatccgttcacgaaggacgcagattcacctgtgaag
tcgtctccgacgacagttggtaaagcgggacgtacgaatcccttcaaggccgccggttcg
agaaatccgtattcttcttcttcgtcgtcgtcgtccggtcagccgcgagcgacgaacatc
ctggacaacatgacgtccagcagaaagtcggctcctctcggcgggtcggcggggaaaccg
aacaaaaaccccgtcctcaaaccgctggcccccagacccaaaacaaagactcagtccacg
ctgctgcagatgaccgtctctaaagccgccagcaagaagacgccggagagcgtcgagccg
gccgccgatcggccgaaacgagccgacgtcccgcctccggcggcgccgcctgaaaacgcc
gagaacaagaggccgaggacgggcttccagctgtggctcgaggaaaacagggagagcatc
gtcgccgaccggccggacctcgaggagacggacgtcatcaaggaggcgatgggacgcttc
aggacgctgtcggcggacgagcgactgtcgtggacagaaagagcaaaaggccaaactgga
gacgcagccgatctgaagaagaggaaaagagcaggaggaggaggaggaggaggaggagga
gaggaggacgagaaggaaacggccaaagctgatgaaaacagcgccaagaagaagaaagct
ctggacccctcctccaagctgtcggcgttcgcgttcaacaaaaactaa

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