Brachyistius frenatus (kelp perch): 138624873
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Entry
138624873 CDS
T10614
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfre04131
]
138624873 (lingo1b)
Membrane trafficking [BR:
bfre04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
138624873 (lingo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
Ig_2
LRR_Zer-1
LRR_9
LRR_RPS2
V-set
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
138624873
NCBI-ProteinID:
XP_069561544
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MTVLVSSRMVSGEAGGHSYLVACWQPILILMLGTVLSGSTTGCPSRCDCNGQERSVVCHR
RRLATLPEGIPTETRQLDLSKNRLKTLGPEEFINYPQLEELQLNENTISSIEPGAFSNLM
NLRTLGLRNNQLKLIQLGVFTGLTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLESLNIEGCNLASVPTDALSHLHNLLSLRLRYLNVTVIRDYSFKRLY
RLRVLEISHMTALDTMTTKCLFGLNLTSLSITNCNLTVIPYQAISHLRYLRFLNLSFNPI
HTVEGNQLFNLQKLQAFHLAGGKLAAIEPYSFRGLNHLRVLNVSHNSLNTLEESVFHSVG
NLETLALYDNPLACDCRLLWVFRRRWRLNFNRQQPMCASPEVVGGKEFKDFPDTLPPHYF
ICQKSKIADYKVQESHVDEGTTVHFACQAEGDPVPVIMWQSPKKDYITTKTAGSRLSVSN
EGTLEVRYAQIQDNGTYWCVASNAAGNDTKAAHLFVHSYSPNWPHQPNKTFAFISNQPSD
EGANVTRATVPFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKDSTKTSIEVEYV
PRKEETEEASPAEAPVQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaagcagtaggatggtgtctggggaggcaggagggcacagctacttg
gtggcgtgctggcagcccatcctgatcctgatgctaggcaccgtcctctctggctccacc
accggttgcccctcccgatgcgactgcaacggccaggagcgctcggtcgtgtgccaccgg
cggagactggcgactctccctgagggcatccccactgaaacgaggcagctcgacctcagc
aagaaccgtctgaaaactctggggcccgaggagttcattaattaccctcagctcgaggag
ctgcagcttaacgaaaacaccatttcgtccatcgagcccggggcgtttagcaacctaatg
aaccttcggaccctcggtttacgcaacaaccagctgaagctcattcagctcggggtgttc
acaggcctgactaacctcacccagctggatataagtgagaacaaaattgtcattctgctc
gactatatgttccaggagctgtacaacctgagggctttggaggtgggtgacaatgacctg
gttttcatctcaccccgatcatttcatggtctcagcaacctcgaaagcctcaacattgag
ggatgcaatctggcctcagtgcccactgacgcccttagccatctgcataacctgttgtca
cttcgattacgctatctcaacgtcactgtcataagggattactcctttaagaggctgtat
cggctcagagtgctggagatttcccatatgactgctctggacaccatgaccacgaaatgc
ttgtttgggctcaacctcacatcgttgtccatcacaaactgtaacctcaccgtcatcccc
taccaagccatcagtcacctcagatatctccggtttctcaatctgtctttcaatcccatt
catacggtggaagggaaccaactgttcaacctccagaagctccaggcttttcacttggct
ggtgggaaattagccgccattgaaccctactctttccgaggactcaaccacctgcgtgta
ctcaacgtatcccacaatagtttgaacaccctggaggagtccgttttccactcggtggga
aacctggagacgctggctttgtatgacaacccgttggcctgcgactgtcgcttgctctgg
gtctttcgtcggcgctggaggctcaacttcaacagacagcagcccatgtgtgcttcaccc
gaggttgtgggaggaaaagagttcaaggatttcccagacacactcccgccgcactatttc
atctgccagaaatcaaagatcgcggattataaggttcaagagagccacgtcgacgaagga
actactgttcattttgcctgccaggccgagggtgatccagttcccgtgataatgtggcaa
tcccccaagaaggattacatcacgaccaaaactgcggggtcgagactttcggtgtctaat
gagggtacgctggaggtgcgttacgctcaaatccaggacaatggcacttactggtgcgtt
gcaagtaacgccgctggcaacgacaccaaagctgctcacctttttgtgcatagctactcc
ccgaactggccccaccagccaaacaagacatttgccttcatttccaaccagcctagcgac
gaaggcgctaatgtgacccgggctacagttccatttccctttgatgtaaagacacttatc
attgcaaccaccatgggatttatctctttcctcggagtggtcctcttctgtctcgtaatt
ttattcctctggagcagagggaaggacagcaccaagacaagtatagaggttgaatatgtg
ccacgtaaagaggaaacagaggaggccagtccagctgaggcacccgtccaattcaacatg
aaaatcatgtga
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