Brachyistius frenatus (kelp perch): 138624970
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Entry
138624970 CDS
T10614
Name
(RefSeq) polycystin-1-like protein 1
KO
K04987
polycystin 1L1
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bfre03037
]
138624970
04040 Ion channels [BR:
bfre04040
]
138624970
Cilium and associated proteins [BR:
bfre03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
138624970
Ion channels [BR:
bfre04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138624970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
Polycystin_dom
PLAT
PKD
PKD_channel
PKD_4
GPS
Vps35
zf-UBR
Motif
Other DBs
NCBI-GeneID:
138624970
NCBI-ProteinID:
XP_069561677
LinkDB
All DBs
Position
Unknown
AA seq
2392 aa
AA seq
DB search
MLSCRVNVGTNATFLWSFGDGTTRTGQSTERHVFHRTGEFRVEVTVFNLVSSASLSSHIF
VVDQPCRPPAVKNMGPLKLQVQRHEVIRLGVTYETEVDCDSSGGLNYTWTLRDSDGRVVP
LPLTDTHKQSLSLQSHLLQYDTYTARARVQVVGSVVYSNYSVRVQVTPSPPVPFIQGGTN
VFISSISNTTVTLDGQASYDPDFPMNPLSYSWTCKPVSSIPSSCFSHHIPSSSPVLTLPV
SFLKHNFDQFQFTFTVHSGERSASSEAFLTVTSNTIRKVSVYCRDCQGDHVNWDKSFSVS
AICEDCNIPVKHTQYSWSLYLVNVSSKPVTEVLFCYTSDLSAPSTIKEDPDTSPQIPGNT
SHYTHTDYASTSSSFPENASETEAKELYLDLPYKSKHSTSPFVLDNGSFLDPDHFVQRDF
ISEFPFDPDSSADWEFSPPVLERGDVDGRLDPDYDVPFPSAEEGDPGMSAGRPTGVDDEG
FSAGDDSVFNPAFHEDEGSNLVDPEPPVVLQEPTLLDLPRDSVDRGLFESFTYTGISSPS
LGFRPFSLRPKSRYMVEVTVTSQNSFLGRTQLFLQTNPVPKGMTCQVQPEQGVELRTHFS
VFCSSGREDLLYEYSYSVGGRPPRTLYHGRDFQYYFSLPSGDPSDDYKVIIYTEIRSGTH
GSATKPCPVTVQVRPSFLRDTSSSSSSHHNPDLELSESGLRNLSALVQLGNSVEIRNYVS
LLSGVLNRLSRDTAANTHAQRHVRNVLICTVCELESSEQESMADNIRILKDLLQVTSQVT
LVSARQVTAHVQVVSELFSKSSAPDQYHGNQKTLNSLVSLLSYSLQAVTSYENTPRTHNS
ADITKAQESDSLTGENTRDVEDAPGGCLPEQLVPLVADILQTASDLMRKSLLFHETQEHR
VSTDFITLYAARQNQTSTVMSSGSTTFYMPASLIQMLFAHHIPSHQQCVLKVLTELAHSP
YSWASYPTQLSGQVVDLSLYKCSTRRKIPIRPLIQPISIELLHPHSKKSSTREYILLRSQ
VNYHSFNITHEHLQQAIQLTVVFTPPLNKAFPIMLLFRMFERPTPSMHHLQRIHHWESNT
TRISLPPSHLNAAGVGHLALLNADFEKAPRGKRLSEQISYSLSVDSSLCLSWDGQQGAWT
PHGCRTRQSETTSAVNCSCHQLRPLTVAQQQIQSSHDTADLDPFLSVSSDLTVLGVLVVF
VCLYIPGLVLCKRAEMNGRVHYLSDNSPYDPHLYAVTIHTGLCSAARLSAKVYIMLHGED
GSSQTKELKVPGCTLFRRNSQDTFILSAADSLGPVWGVHLWHDNSGPSADWYLKQVEVSE
VNRGNEKRWLCIGQCWLAVNKGDGRVERMLRVCTEGTGFAQMLCLKLPDYVADFHIWMSV
YSCPCPTSFTHSQRLSVCVLLVLGYACVNTVIIAQTDDPLPSELGFVDMSAVSITTGLLS
AVAVLPAATVISFLFRLRGDTDLLSVSSTIQEHKDTDNGAAVEPDVVTRKEGALESGVVP
VPQTLMVVSKGSNADRAPQGKELLTESGRFRGTQNSGLSDTRDECQPAQKEKDPRRKCSS
GRSFEEGSRHQTAWSGHSSGFGVIDKLREGRFRQASQRCHHVAWALCLLLSLCCLVLSAA
LGMRFSSSKVLLWVHSLFISVMSCIFLIHPAVILTVAVTVSCWYRRRPDFHSFLSIREFE
VETSKLWNHTGADRPEEQLRPSALLQKRCSYLEERLRARQRERHLRLVSPQTPAELRKTR
GKKRRETLIHKTLRNFSLWASMLFLLMCITYSNSFSDHYHLNRAVSRQFIRNHENDFMSI
QKDDDWWKWTHTSLLDLLYKNASAKPEQSHILIGDPILQKMEISDTFQSQVSMVTLPRTC
GQLGCYSGPSATVGLGHTKSDAASKLKLLHSAGWLGGQTVALEVQFTLYSPAPNLFTSVT
LLTERSPVGVLLPSAKVLSVRVYHTPAVWDYVVMVCQLFFLFLSVLQLCYQVSNVGQEGL
MGYWRTPSNWAEVSLLVVTLTYYICHVHHSTLVMEVVELLQSHNHRGRVDVSHLATWEQF
IRTLRGIMLFLLTMKCVTVLRVNRTLDTAATVFAHALSSLLWPTMSGLILLAVLSCMRNL
LYIESSWALWTHCWGLKATGRLLLLPGHDFLYCGALYLSSTVVLTAVVMGAVSSLVRSGK
RSQSRRNVFTSAELAGYIRERVSEFTGQHRPAWIDKHVEGRTYYLEEFESLVDELLLRLD
TFSDSLHHTLPPEAHRYREEDGPDASPAPQSSSMSTQDSVRPQTMMNNPADVGDHCLSNY
GDTPLASHQFRSQVELEILQVLHQRGQTRHSLLSDIAGPSDYKLSSKNCLSCPESTSLKS
FPKECVPVKQAGQWTETNDGCWLSKTQATHAEVVVVEVLVHEELERVEPDTQ
NT seq
7179 nt
NT seq
+upstream
nt +downstream
nt
atgctgagttgccgggtgaacgtaggaactaacgcgaccttcctgtggagcttcggagac
ggaacaaccaggacaggacagagcaccgaaaggcacgtcttccacagaacaggagagttc
agagtcgaggtgaccgtgtttaacctggtcagctcggcctctctgagcagccacatcttc
gtggtggaccagccttgtcggcctccagcagtcaaaaacatggggcctctcaaactacag
gtgcaaagacatgaggttatccgtctgggggtgacgtatgagacagaagttgactgtgac
tcatcaggaggtctcaactacacctggacgttacgtgactctgacggcagggtcgtccct
ctgcctctcacagacacacacaaacagagcctcagtctgcagagccacctcctgcaatac
gacacctatactgccagagccagggtccaggtcgtcggcagcgtggtgtacagtaactac
agcgtgagagttcaggtgacaccgagcccccctgtgcctttcatccagggcggcaccaac
gtcttcatcagcagcatcagcaacaccacagtaaccctggatgggcaagcgtcttacgac
cctgacttccccatgaacccgctcagctacagctggacatgtaagccagtcagctccatc
cccagctcctgtttcagccaccacattcccagttcatcccctgtgctcacactccctgtc
agtttcctgaaacacaactttgaccagttccagttcaccttcaccgtccacagcggagag
cgctcagcttcatcagaggctttcctcactgtaacatcaaacacaatcaggaaggtatcc
gtttactgccgtgactgccagggagaccatgtgaactgggataagtctttctcagtcagc
gccatctgtgaagactgtaacattcctgtaaaacacacccagtacagctggagtctgtac
ctggtcaacgtttcatccaagcccgtcacggaggtcctgttctgttatacatcagatctc
agtgctccgtccaccatcaaggaggatcctgatacctcccctcagattcctgggaatact
tcacattacacccacactgactatgcctctacttcttcatcctttcccgagaatgcctct
gaaacagaggccaaagagctctatctggacctgccctacaagtcaaagcactccactagt
ccttttgtccttgacaatggtagtttcctagatccagaccattttgtccagagggacttt
atcagcgaatttccatttgaccctgactcttctgctgactgggaattttctcctccagtg
ctagagaggggggatgtggatggccggctggatccagattatgatgtccccttcccgagt
gcagaggaaggagacccggggatgtcagcaggaagacccacaggtgtggacgatgagggc
ttcagcgcaggagatgactcggtgtttaatccagcatttcatgaagatgaggggagtaat
ttggtggatcctgagccacctgtggtgcttcaggagccaactttgctcgacttaccccga
gactcagtcgacagaggcctgtttgagtccttcacttacacaggaatctcctccccttca
ctcggcttcagacccttcagcctgaggccaaagagcagatacatggtggaggtcactgtc
acatctcaaaatagttttctgggccggactcagctgttccttcaaaccaaccctgttcca
aagggcatgacgtgccaggtgcagccagaacaaggagttgagctacgcacacacttcagt
gtcttctgcagctcagggagggaggacttactgtatgagtacagctacagtgtaggagga
cgaccccccaggacactgtaccacgggagagacttccaatactacttcagccttccttca
ggtgaccccagtgatgactataaagtgataatttatacagaaataagaagcggcacacat
gggtccgccaccaaaccctgtcctgtcaccgtccaagtccgaccaagctttctcagagac
acctcgtcttcttcttcttctcatcataatcctgatctggagctctcagagtcaggtctg
aggaacctgtcggctctggtgcagcttgggaacagtgtggagattcgtaactacgtcagt
ctcctctccggcgtcctgaacagactcagtcgggacactgcggccaacacacacgcacag
agacacgtgcgcaatgtgctcatttgcacagtgtgtgagctcgagagcagcgaacaggaa
tcaatggcagacaacatccgtattcttaaagaccttctgcaagttacaagtcaggtgaca
ttagtgagtgccaggcaagtaacagctcatgttcaggttgtctcagagcttttttctaag
tccagtgctccagatcagtaccatggtaaccagaagacactcaactctctggtcagcctg
ctttcatacagccttcaagcggtcactagttatgaaaacacacctagaacacacaacagt
gccgacattacaaaagcacaggaatcagattcactgactggtgaaaacacaagagatgtt
gaagatgctcctggtggctgtctaccagagcaactggtgccgcttgtagctgatattctg
cagactgcttcagacttaatgcggaagtcccttttgttccatgagacccaggagcacaga
gttagcactgattttatcaccttgtatgccgcacgccaaaaccaaacgtccacagtcatg
agcagtggctccaccactttctacatgccggcttctctgatccagatgctgtttgctcat
cacatcccttcccatcaacagtgtgtcctcaaagtgctgactgagcttgctcacagccct
tacagctgggccagctatcccacacagctgagtggacaagtggttgacctgagtctgtac
aagtgcagcacgaggagaaagatccccattcgccccctcattcagccaatcagcatcgag
ctgctgcacccacacagtaaaaagagctctacacgtgagtacatccttctgcgcagccag
gtcaactaccacagcttcaacattacccacgagcacttgcagcaggccatccagctgaca
gtcgtgttcacgccaccactcaacaaggcgtttcccatcatgctgctcttcaggatgttt
gagaggccaactcccagcatgcaccacctgcaaaggattcaccactgggagagcaacacc
acacggatcagtctgcccccatcccacctcaatgctgcaggtgttggtcacttggccctg
cttaacgctgattttgagaaagcacccagaggcaagcgcctgagtgaacagataagttac
agcctctcagtggacagcagtctgtgtttgtcctgggacggccagcagggggcctggaca
ccccacggctgcaggacacggcaatcagaaacaacttctgcagtgaactgcagttgccac
cagttgaggccgctgactgtggcgcagcagcagatccagagcagccatgacacagccgat
ctggacccgttcctaagtgtgtccagtgatctgacagtcctgggtgtcctggtggtgttc
gtgtgcctgtacatcccggggctggtgctgtgtaagagagctgagatgaatggaagagtc
cactatctttctgacaactctccatatgacccacatctctatgctgtcaccatccacact
ggtctctgctctgcagcccgtctgagtgcaaaggtttacataatgctacatggtgaagac
gggtcctcacagacaaaagaacttaaagtcccaggatgcactctcttcaggaggaactct
caagacacatttatactcagtgcagcagacagcctgggcccggtgtggggggttcactta
tggcatgacaactctggaccctccgcggactggtacctcaaacaagtggaggtctccgag
gtgaacagagggaatgagaagagatggctgtgtattggtcagtgctggttggccgtgaac
aaaggcgatggccgagtggagaggatgctacgtgtttgcacggaagggacgggctttgct
cagatgttgtgcctcaagctacctgactacgtggctgatttccacatttggatgtctgtg
tacagctgcccctgtcctacctccttcacacacagtcagagacttagcgtgtgtgtgctg
ctggtgttggggtatgcatgtgtcaacacagtaatcatagcacaaacggatgatccgttg
ccatccgagttgggttttgtcgacatgtcagctgtttctataacaacgggacttttgagt
gcggtggctgtgttgcccgcagcaacagtgatatctttccttttccgactgcgtggggac
acggacctcctgtcagtctcctcgacgattcaagagcataaagacacagataacggagct
gcagtcgaaccagatgtggtcacaagaaaggagggtgcattagagagcggtgtggtacca
gtgccccaaacgttaatggtggtttctaaagggagcaatgccgaccgagcgcctcagggt
aaagaacttttaaccgagagcggcaggtttcgtggaacccaaaattctggtttgtcagat
acgagggatgaatgtcagccagcacaaaaggagaaagatcctcgaagaaaatgttcatca
ggccgcagctttgaagaaggcagccgtcaccagacagcgtggtctggtcacagcagcggc
ttcggagtcatcgacaaacttagggagggaagattcagacaagcctcccagcggtgtcac
catgtggcctgggccctgtgtctgctgctgtccctctgctgcctggtgctctctgcagcg
ctgggaatgagattcagcagcagcaaggttctactttgggttcactctcttttcatctct
gtgatgtcttgcatcttcctcatccacccagctgtgatacttacagttgccgtgactgtc
tcctgttggtacaggagaagaccagactttcatagtttcctcagtataagggagtttgag
gtagagacttcaaaactgtggaaccacactggtgctgatcgacctgaagagcagctcagg
ccatctgctttactccagaaaagatgctcgtaccttgaagagcgtctcagagctcgtcag
agagaacgccacctgcgactcgtgagcccacagactccagcagagctgaggaaaactcgt
gggaagaaaagaagagagactctcatccataaaacactgagaaatttttctctctgggcc
tccatgcttttcctgttgatgtgtataacctacagcaactcattcagtgaccattaccac
ctcaacagagctgtcagcaggcagtttataaggaaccatgagaatgattttatgtccata
caaaaagatgatgactggtggaagtggacacacacaagtctgcttgatttactgtacaag
aatgcatcggccaaacctgagcagtcacacattttgataggagatccaatcctgcagaag
atggagatatcagacacatttcagagccaggtttccatggtaacacttccaaggacatgt
ggtcagctgggttgctactcagggcccagcgctacggttggcttaggacacacaaagtct
gacgctgcatcaaaactgaaacttctgcattcagccggctggctgggaggacagacggtg
gccctggaggttcagttcactttgtacagccctgcaccaaacctgttcaccagcgtgact
ctgctcactgaacggagccccgtcggtgtcctactgccctccgccaaagtcctgtcagtc
agggtgtatcacactcctgctgtctgggactatgttgttatggtctgccagctcttcttc
ctcttcttgtctgtactacaactctgttatcaagtgtccaatgttggacaggaagggctg
atgggatactggaggacacccagcaactgggcggaagtcagtctgctggtggtgacactc
acatattacatctgtcacgtccatcactccacccttgtcatggaggtggtggagctgctg
cagagtcacaaccacagagggcgtgttgatgttagccacctggccacctgggaacaattt
attcgtactctgcgtggtatcatgctcttccttctcaccatgaagtgcgtgaccgtgctg
cgggtgaacaggactttagataccgctgctacagtctttgcccacgcactctccagcctc
ctttggccaacgatgtcaggtctgatccttctcgcggtgttgtcctgcatgaggaatctg
ctgtacatagaaagctcttgggcactttggactcactgctggggcctcaaagccaccggg
cgcctcctcctccttcctgggcacgatttcttatactgtggagctctctatctgtcctct
actgtggttctgacagcagtggtgatgggggccgtgtcctcattggtcagaagtggcaaa
agatctcaaagcaggaggaatgtcttcacctcagcagaattggcgggctacattagggag
agggtctctgagttcaccgggcagcatcgaccagcatggattgacaaacacgtggagggg
aggacgtattacctcgaggagttcgagagcttagtggatgaactgctgctcagactcgac
accttctccgacagcctgcaccacactctgccccccgaagcccaccgctacagagaggag
gacggtcctgacgcatcacctgcaccacaatcctccagcatgagcacacaggactctgtg
aggccacagacgatgatgaacaaccccgcagatgtaggtgaccactgtttgtcaaattat
ggagacaccccacttgcatctcaccagttcaggtcccaagttgaactggagatcctgcag
gttctacatcagagaggccaaacgagacacagtctcctctcagacattgctgggccatct
gattataaattaagcagtaaaaactgcctgtcctgcccagagtcaacatcactcaaaagc
tttccaaaagaatgtgttccggttaagcaagctggccaatggactgaaacaaacgacggc
tgctggttaagtaaaactcaggctacccatgcggaggtggtggtggtggaggttctagtg
catgaggagcttgagagagtagagccagatacacagtag
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integrated database retrieval system
