KEGG   Brachyistius frenatus (kelp perch): 138625117
Entry
138625117         CDS       T10614                                 
Name
(RefSeq) histone deacetylase 2 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bfre  Brachyistius frenatus (kelp perch)
Pathway
bfre03082  ATP-dependent chromatin remodeling
bfre03083  Polycomb repressive complex
bfre04110  Cell cycle
bfre04330  Notch signaling pathway
bfre04350  TGF-beta signaling pathway
Brite
Enzymes [BR:bfre01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     138625117
Chromosome and associated proteins [BR:bfre03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     138625117
   HDAC complexes
    Sin3A-HDAC complex
     138625117
    BRAF-HDAC complex
     138625117
    REST complex
     138625117
    SHIP complex
     138625117
    MiDAC complex
     138625117
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     138625117
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    138625117
  Chromatin remodeling factors
   NuRD complex
    138625117
SSDB
Other DBs
NCBI-GeneID: 138625117
NCBI-ProteinID: XP_069561930
LinkDB
Position
Unknown
AA seq 491 aa
MAYTTAGGTRKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK
ATAEEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSSGGSA
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYQ
QIFRPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYVKTFNLPLLML
GGGGYTIRNVARCWTYETAVALDTDIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTREY
TDKIKQRLFENLRMLPHAPGVQMQAVPEDAVPDDTVDEDTEDPDKRLSIRATDKRIACDE
EFSDSEDEGEGGRRNVANRRKGAKRPRVDEDKKDGEETKADAKEEEEKTKDSSTEKSDSI
SSVKTEQTSSA
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggcttacacgacagcgggggggaccaggaagaaggtctgctactactacgacggtgac
atcgggaattattactacggacaaggacatcccatgaaaccgcatcgtattcggatgact
cacaacctgcttctcaactacggactgtacaggaagatggagatctacaggccgcacaaa
gccacggccgaggagatgacgaagtaccacagcgacgactacatcaagttcctgcgatcc
atccggccggacaacatgtccgagttcagcaagcagatgcagcgcttcaacgtcggggag
gactgcccggtgttcgacggcttgtttgagttctgccagctgtcttctggcggctccgct
gccggttccgtgaagctgaacaggcagcagacggacatcgcggtgaattgggccggggga
ctccaccacgccaagaagtccgaagcctccgggttctgctacgtcaatgacatcgtgctg
gccatcctggagctactcaagtaccaccagagggtactgtacgtcgatatagacatccac
cacggagacggagtggaggaggccttctacaccaccgacagggtgatgacggtgtccttc
cacaaatacggggagtacttccctggaaccggagacctgagggatattggagctggaaaa
ggcaaatattacgccgtcaacttcccgctgcgagatggcattgatgacgagtcatatcag
caaatcttcaggcctgtgatggccaaagtgatggagatgtaccagcccagcgccgtggtt
ctgcagtgtggcgccgactctctctccggagaccgcctcggctgcttcaacctcaccatc
cgcgggcacgccaagtgtgtggagtacgtgaagaccttcaacctgccgctgctcatgctg
ggcggaggaggatacaccatccgcaacgtggcgcgctgctggacctacgagacggccgtg
gctctggacacggacatccccgacgagctgccgtacaacgactactttgagtactttggg
ccggacttcaagctgcacatcagcccctccaacatgaccaaccagaacacacgcgagtac
acggacaagatcaagcagcggctgttcgagaacctgcggatgctgcctcacgcccccggc
gttcagatgcaggccgtccccgaggacgccgtcccagacgacacggtggacgaggacacg
gaggaccccgacaaacgcttgtccattcgtgccacagataagaggatagcctgcgatgaa
gagttctccgactcggaggacgagggggagggcggccggaggaacgtggccaaccgcagg
aagggagccaaaaggccccgagtggacgaggacaagaaggacggagaggagacgaaagct
gatgcaaaagaagaagaagagaagacgaaggacagcagcaccgagaagagcgactcgata
agcagtgtgaagactgagcagaccagcagtgcctga

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