Brachyistius frenatus (kelp perch): 138625213
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Entry
138625213 CDS
T10614
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138625213 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfre03021
]
138625213 (smarca2)
03036 Chromosome and associated proteins [BR:
bfre03036
]
138625213 (smarca2)
Transcription machinery [BR:
bfre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138625213 (smarca2)
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
138625213 (smarca2)
Chromatin remodeling factors
BAF complex
138625213 (smarca2)
PBAF complex
138625213 (smarca2)
GBAF(ncBAF) complex
138625213 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
138625213
NCBI-ProteinID:
XP_069562078
LinkDB
All DBs
Position
Unknown
AA seq
1613 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPSSVHSMMGPSPGPGTPNTPHGM
QGQGQSEYSQDGMYTMHKPMEGMNDKTMAEAMHFGHMKGVGMRALHSGMGPPQSPMDQHS
QGYMSPHPSPMGVHEHASSPMSGGGGGPTPPHIPSSQSGPMISMDPQGGMSSMGQQGRGP
SAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQPAPSASPYNRPPGMPMAPMGGPQSSPCPAPAMQGH
NQSTGPKPWTDGHGGENQANAQKHLTPVPSGRPSPAPPQTSGVSAGPMPGGSAPPQPPGQ
QVSPMLQMQKQNRITPIQKPQGLDPVGILQEREYRLQARIAHRIQELESLPGSLPPDLRT
KATVELKALRLLNFQRQLRQDVVACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEK
QQKLEQEKKRRQKHQEYLNSILQHAKDFKEYHRSVSGKVQKLTRAIATWHTNTEREQKKE
TERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAK
EKKRKKKKKKKVDGDGEGTSAYGPDGEPMDESSQMSELPVKVIQTETGKVLQGTDAPKSS
QLEAWLEMNPGYEVAPRSDSEQSSSEFEEEEEDEATKAETEEKKIIDPNGVLVTVKAAKH
IIDSAKQDVDDEYSVAAGQTSSQSYYGVAHAVIERVEKQSSLLINGSLKHYQVQGLEWMV
SLYNNNLNGILADEMGLGKTIQTIALITYLMEYKRLNGPYLIIVPLSTLSNWVYELDKWG
PSVVKISYKGTPALRRGLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRM
KNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAP
FAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKV
LYRHMQKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPN
GIISGPDLYRASGKFELLDRILPKLHATNHRVLLFCQMTTLMTIMEDYFGHRNFQYLRLD
GTTKAEDRALLLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQ
DRAHRIGQQNEVRVLRLCSVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGQERRVFL
QAILEHEEQNEEEDEVPDDETLNQMIARNEDEFELFMRMDMDRRREDARNPKRKPRLMEE
DELPSWIIKDDAEVERLTYEDEEEKLFGRGSRCRRDVDYGDTLTEKQWLRAIEDGNLEEM
EEEIRLKKRKRKRRQDKDSSSREDRGAKAKKRRGRPPAEKLSPNPPKVTKQMNTIIDTVI
NYRDGAGRQLSEVFVQLPSRKELPEYYELIRKPVDFKKIKERVRSHKYRNMGDLEKDVML
LCQNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKDEESDDDSDEDDDDDDDESEAEAKS
VRVKIKLSREARALDKGKKRQSRGKAKPVVSDDDSDDDQDDNDQSDKSKSDDE
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccttcggacacatcaggtggtatgtcccatcctggcccctctcctggggca
ggtctgtccccagggccgatcttgggccccagccctgggccagatccctcaccaagctct
gttcacagcatgatgggtcccagccccggaccaggaacacccaacacacctcatggcatg
cagggccagggacaaagtgaatactctcaggatggcatgtacacaatgcacaagcccatg
gagggaatgaatgacaagacgatggcagaggcaatgcactttggtcacatgaaaggtgtg
gggatgagagctctccatagtggcatggggcctcctcagagtcctatggaccagcacagc
caaggatacatgtccccccacccttcccccatgggagtccatgagcatgcttctagtcca
atgtcaggtggtggaggtggacctacacccccccacattccttcgtcccagtcaggccct
atgatatctatggatccccaaggaggcatgtccagcatgggccagcagggacggggacct
tccgcatttagtccggtccagctgcagcagctcagagctcagattctggcctacaagatc
ctgggccgtgggcagccgctgcctgaaaacctccagctggctgtacagggcaaaaggagc
ctacccacaatgcaacaacagcaacaacagcaacaacagcaacaacagcagcagcagcag
cagcagcaacaacaacaacaacaacaacaacaacagcagcagcagcagcaacagcagcag
cagcagcaacagcagccggcccctagtgctagtccttataacaggcctccaggtatgcca
atggcacctatgggtggcccccaatcaagtccctgccccgccccggccatgcaaggacac
aatcaaagcacaggacccaaaccttggaccgatggtcatggtggtgaaaaccaagccaat
gcacagaagcacctcacccctgttccaagcggtcgcccgtcgcctgcgccgcctcagacc
tccggcgtgtcggccgggcccatgcccggcggttcagccccccctcagcctcccgggcag
caggtgtccccgatgctccagatgcagaagcagaaccgcatcacgccgatccagaagccc
cagggcttggacccggtggggattctgcaggagagagagtacagactgcaggctcggatt
gcacatcgaatccaggaactggagagtctgccgggctccctgcctcctgacctcaggact
aaagccacagtggagctcaaggctctgcgtcttcttaacttccagcggcagctgaggcag
gacgtggtggcctgtatgaggcgcgacacgaccctggagacagccctcaattcaaaggcc
tacaggcgcagcaagcggcagacgctgagggaggcccgcatgacggagaagctggagaag
cagcagaagctcgagcaggagaagaagcgaagacagaagcatcaggaatatctcaacagc
atccttcaacatgcgaaagacttcaaagagtatcatcgctcagtgtctgggaaagtccag
aaactcaccagagccatcgccacctggcacaccaacacagagcgggagcagaagaaggag
acggagagaattgagaaggagaggatgaggagacttatggcagaagatgaagaaggctac
cggaaactaattgaccaaaagaaagacaagcgtctggcctacctgctgcagcagacggat
gagtatgtggccaacctcaccaccctggtgtatgaacacaaagctgctcaagctgccaag
gagaagaagaggaagaagaagaaaaagaagaaggtagatggagacggtgaaggcaccagt
gcctatggacccgatggagagcccatggatgagagcagccagatgagtgagctgccagtc
aaagtgattcagacagagactggcaaagttttgcagggaacagatgctcccaaatccagc
cagttggaggcgtggctcgagatgaaccctgggtatgaagtcgccccgcggtcagacagc
gagcagagcagctccgagtttgaggaggaggaggaagacgaggcgaccaaggccgaaaca
gaggagaagaagataatcgatcccaatggagttttagtgactgtcaaagctgccaagcac
atcattgattcagccaagcaggatgtggatgatgagtacagtgttgctgctggccaaacc
agctcccagtcgtactacggtgtggctcatgctgtcatcgagagggtggagaagcagtcg
tcactgctgatcaatggctcactcaaacattaccaggtccaggggctggagtggatggtg
tccctgtacaataacaatctaaacggcatcctggctgatgaaatggggctcggcaaaacc
atccaaaccatcgccctcatcacctacctgatggagtacaagaggctcaatggtccctat
ctcatcatcgtccccctctcgactttgtcgaactgggtctacgagctggataaatgggga
ccctctgtggtcaaaatttcatacaagggcacccccgctctgcgtcgtgggcttgtgcct
cagctccgcagcgggaagttcaatgtcttgctgaccacctatgaatacatcatcaaagac
aagcacatactagccaagatccgctggaagtacatgattgtggatgaaggtcaccgcatg
aagaaccaccactgcaagttgacccaggtgttgaacacccattatgtggccccccggcgc
ctcctcctcaccggtactccactgcagaacaagctgcccgagctgtgggccctgctcaac
ttcctcctgcccaccatcttcaagagctgcagcaccttcgaacagtggttcaacgcaccc
ttcgccatgacaggagagagggtcgacctaaatgaggaggagaccatcctcattatccgc
cgtctgcataaagtgctccgccctttcctgctacgcagactgaagaaagaggtggagtct
cagctgcccgagaaggtggagtatgtcataaaatgtgacatgtctgccatccaaaaggtt
ctgtaccgccacatgcagaaaggcatcctcctcactgatggctcggagaaagacaaaaag
ggcaaaggaggagcgaagaccttgatgaacaccatcatgcagctgaagaagatctgcaac
catccttacatgttccagcacattgaggaatctttcgctgagcacttgggctatccaaac
ggcatcatcagtgggcccgatctgtatcgagcttctgggaagtttgagctcctagatcgc
atcctgccaaagctgcacgccaccaaccacagagtcctgctgttctgccagatgacgact
ctcatgacaatcatggaggactacttcggccatcgcaactttcaatatctacgtcttgac
gggaccaccaaggctgaggaccgagcgttactgctgaagaagtttaatgaggaaggatcc
cagtacttcatcttccttctcagtaccagagccggaggtcttggcctcaacctgcaggct
gccgacacggtcgtcatctttgacagtgactggaaccctcaccaggacctccaggctcag
gatcgggctcaccgcatcggtcagcagaatgaggtccgagtgcttcgtctctgcagcgtc
aacagtgtagaggagaaaatcttggcagctgccaaatacaagctaaacgtggatcagaag
gtcatccaggccggcatgtttgaccagaagtcctcaggccaggagcgccgtgtcttcctc
caggccatcttggagcacgaggagcagaatgaggaggaagatgaggtacctgatgatgaa
actcttaaccagatgatagcccgcaatgaagatgaatttgagctcttcatgcgcatggac
atggaccgacgccgggaggacgccaggaacccgaagcgtaagcctcgtctgatggaggag
gacgagctgccttcttggatcatcaaagatgacgcagaggtggaacggctcacctatgaa
gatgaggaggagaagttgttcggccgaggatcgcgctgccgtcgggatgtggactacggt
gacacactgactgaaaaacagtggctacgggccattgaggatggaaacttggaagagatg
gaggaggagatccggctgaaaaagcgcaaacgcaagagacgtcaggacaaggactcgtcg
agcagagaggacagaggcgccaaggccaagaagagacgtggacgaccgccagcggagaaa
ctctcgcccaacccacccaaagtcaccaagcaaatgaacaccatcatcgatacagtgatc
aactacagagacggggcaggaagacaactcagcgaggtctttgttcagcttccatccaga
aaggaactcccagaatattatgagctgatcagaaaacctgtggacttcaagaagatcaag
gagcgtgtgagaagccacaaatacagaaacatgggagatctggagaaggatgtgatgctg
ctctgtcagaatgcgcagacctttaacctggagggatcccagatatacgaggactccatt
gttcttcagtcggtattcaagagtgccagacagaaaattgccaaggacgaagagagtgac
gatgacagtgatgaggatgatgacgacgacgacgatgagtcagaggccgaggccaagtcg
gtgcgggtcaagatcaagctgagcagagaggcacgcgctctcgacaaaggcaagaagagg
cagagccgagggaaagccaagccggtggtcagcgacgacgacagcgacgacgaccaggat
gataacgatcagtcggacaaaagcaaaagcgacgacgagtga
DBGET
integrated database retrieval system
