Brachyistius frenatus (kelp perch): 138625407
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Entry
138625407 CDS
T10614
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138625407 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138625407 (dhx36)
03012 Translation factors [BR:
bfre03012
]
138625407 (dhx36)
Enzymes [BR:
bfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138625407 (dhx36)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
138625407 (dhx36)
Translation factors [BR:
bfre03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138625407 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
HerA_C
NB-ARC
NPHP3_N
PhoH
Motif
Other DBs
NCBI-GeneID:
138625407
NCBI-ProteinID:
XP_069562407
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MSSGYGGGGGRRGRRGGGRGHRDGSRERWDRGGGGGSRGRGSDYDCDQDRGGGGGGGGSP
KDRPPPHLKGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITKLLNSVQNDHPGP
GRDSRGPRASSSSTSGHCYFDGDEPEEDKQKIDVKSEEEEDEIGPGHKSQRCFSTTAAKD
EPPDTWEEDEPEEKEKLIRKDKDLEFLFQEVVRDGPLDDTLKRDLQNKISDPKYKEMLKF
REKLPSYKKKEELVELINSNRVLVVSGETGCGKTTQVTQFILDDYINRGVGSMCRVVCTQ
PRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRKQGSVLYCTTGIILQWLRSDP
FLSSISHLVLDEIHERNLQSDVLLVIVKDLLNLRDDLKVILMSATLNAEKFSKYFDNCPM
IHIPGLTFPVEEFLLEDIVEMTRYGPQNKDRRPSWKKSFWQGHNSRPEKEEKEAEYKESW
PCYARTLQDRYSDRTVEALEMLDSDDKIDLELILALIRHIVLNDEEGAILVFLPGWDNIS
SLNDLLMAQQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETSITIDD
VVYVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVRPGKCYHLYNGLRASL
LDAYQLPEIMRTPLEELCLQIKILNLGSIGRFLGKALDPPTEKAVSLAIKNLTDLNALDC
AENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKMAD
MRRKTLSRNSKSDHLTIVNAFQGWEEAKRRGARYEREYCWDNFLSANTLQMLHNMKGQFA
EHLMRTGFVSSKDPKDPKSNVNSDNEKLIKAVIVAGLYPKVATIRPSHSKKRPGVPKVYT
QADGKVCIHPKSVNAEETEFNFTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQK
DGDQETIAVDQWIVFRSPARIAHLVKSLKKELDSLLQEKICNPAPVDWQNRQSKDCAVIT
AIIDLITTQEKPTGSSTGHGRTWPSAPRGQRIHFHDDDDEDD
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgggtatggcggtggcggtggaaggagaggcaggcgaggtggtggtcgcggc
cacagagacggcagcagagagagatgggacagaggaggtggaggaggctcgagaggacgc
ggttccgactacgactgcgaccaggaccgaggaggaggaggaggtggaggaggatcaccg
aaagaccgtcctcctccacatctgaagggccgggagattgggctgtggtacgcaagatac
ggagccgtgaggaggaaacaagctgaccggagatcgagggcggtggtgcagatggatgag
gccagagagcagcacattaccaagctgctcaactctgtccagaacgatcatcccggccca
gggagggacagcaggggtccaagagcctcttcgtccagcactagtggtcactgttacttt
gatggggacgagcctgaggaggataaacagaagatcgatgtcaaatcggaggaagaggaa
gatgaaattggtccaggccacaaatcgcaacgttgcttctctacaacagcagctaaagac
gagcctccggacacctgggaggaagacgagccggaggagaaagagaaactgatcaggaaa
gacaaggatctggagttcctgtttcaggaagtagtcagagacggaccactggatgacacc
ttgaagagagatctgcagaacaaaatatctgatccaaagtacaaagaaatgctgaaattc
agggaaaaactaccatcctataagaaaaaagaggagctggtggagctgatcaactcaaac
cgtgtcctggtggtgagcggggagaccgggtgtggaaagaccactcaggtcactcagttc
atcctcgatgactacatcaatagaggcgtgggctcgatgtgccgcgtggtctgcacgcag
cctcgtcgcatcagcgcaatctcggtagcagagcgtgtagcggcagaaagggcagaaagt
gtggggaatggaaattcttgtggttatcaaatccgccttcagagccggttaccacggaaa
caagggtcggtcctgtactgtaccacaggcattattcttcagtggcttcgctcagacccg
tttttgtccagtatcagtcatctggtgttggacgagatccacgagaggaacctgcaatca
gacgttttgctcgtcattgtgaaggacttactcaacctccgggacgacctcaaggtcatc
ctcatgagtgccacgctcaacgcggagaagttttcaaagtattttgacaactgtccaatg
atccacatccctggtttgacgttcccagtggaagagttcctacttgaggacattgtagaa
atgaccaggtatggcccccagaataaggaccgtcgcccctcatggaagaaaagcttttgg
caggggcacaactccagacctgagaaggaggagaaagaggctgaatacaaggagagctgg
ccttgttatgcacgcacactgcaagaccgatactctgacaggaccgttgaggcactggag
atgttagacagtgatgacaagattgatctggagctgattctggcgctgatccgtcacatt
gttcttaatgatgaggaaggagcaatcttggtcttcctgcccggttgggacaacatcagc
agtctcaatgacctgctcatggctcagcagatgttccgatcagaccggtttgttatcatc
cctctgcactccctcatgcccaccgttaatcagacgcaggtgttcaaaagacctcctcct
ggagttagaaagattgtgattgctaccaatattgcagagaccagcatcaccatcgatgac
gtggtttatgtgatagatggaggcaagattaaggagaccaactttgacaccaacaacaac
atcagcacaatgacggccgagtgggtcagcttagccaatgccaaacagaggaaaggacgt
gctggcagagtgcgtccagggaagtgctatcatctgtacaacggtctcagagccagcctg
ctggatgcctatcaattacctgaaattatgaggacgccgctggaggagctctgcctgcag
attaagatattgaatctggggtccatcggtcggttcctggggaaagccctggaccctccc
actgaaaaggccgtcagcctcgccatcaagaacctcacagacctgaacgccctggactgt
gctgagaacctgacagcgttgggtttccacctggctcgtctgcccgtggagcctcacatc
ggtaaactcatcctgttcggagcgctgctgggctgcctggaccccgtactcaccatcgcg
gcttcactcagcttcaaagaccctttcttcatacccctgggtaaagagaagatggcagac
atgaggagaaagaccctgtccagaaactccaagagtgaccacctcactattgtaaatgcc
ttccagggctgggaggaggcaaaacggcgtggtgccagatatgaaagggagtactgctgg
gacaacttcctgtctgccaatacactgcagatgctgcacaacatgaagggtcagtttgct
gagcatctcatgcgtacaggttttgtcagcagcaaggaccccaaagaccccaaatctaac
gtcaactcagacaatgagaagttaatcaaggcggtgattgtagccggcctgtacccgaag
gttgccacgatcagaccatctcacagcaaaaagagaccaggtgttcccaaggtgtacacc
caggctgatggaaaggtgtgcatccacccgaaatctgtcaacgctgaagagacggagttc
aacttcacgtggctcatttaccatctgaagatgagaacgagcagcatcttcctgtacgac
tgcaccgaggtgtctccgttctctctgctgttcttcggaggcgacatcaccatccagaag
gacggggaccaagagacgatcgcggtggaccagtggatcgtcttcagatcccccgcgcgc
atcgcccacctcgtcaagagtttaaagaaagagctggattctctgctgcaagagaaaatc
tgtaatccggctcccgtggactggcagaaccgtcagtccaaggactgcgccgtcatcacg
gccatcatcgacctcatcactacccaggagaagcccacgggtagcagtacggggcacggc
agaacatggccgtcggcccccaggggacagcgcattcacttccacgacgacgacgacgag
gacgattag
DBGET
integrated database retrieval system
