Brachyistius frenatus (kelp perch): 138625472
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Entry
138625472 CDS
T10614
Symbol
dscaml1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
Cell adhesion molecules [BR:
bfre04515
]
Immunoglobulin superfamily
DSCAM family
138625472 (dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138625472
NCBI-ProteinID:
XP_069562514
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Position
Unknown
AA seq
2102 aa
AA seq
DB search
MWLVTLLLLYSLQEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGGAPHAVLRWY
LAAGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSIIHDNEYFCTAENQAGKIRSPSIHIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIIPVCAACVYKGN
RFFLTSFGALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSVLDSF
QSGEVQVGHSVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRTTGLTISDLRLEDSGNY
ICEVTNSFGSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTVSWYRNT
EPVLPDQHFSIQGAHNETLFISAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIVA
SFSERVVVPGEPFSLMCAAKGAPPPTITWTLDDEPVARDLSRVRASQYTLSDGSTVSHVN
VSSPQIRDGGVYRCAARNSAGSAEYQARINVRGPPRIRPMKNITAVAGRNTFINCRVIGY
PYYSINWYKEGLLLPDNHRQVVYENGTLKLSDVQKGMDEGAYVCSVLIQPQLFITQTVYV
TVKVPPLIQPFDFPPTSIGKLMYIACVVSSGDMPIRITWRKDGQEIVPSSGITIDTKEFM
SSLQISKVSLKHNGNYTCIASNDAATVSTERQLTVTVPPRFVVQPNNQDGIYGKAGILNC
SVDGYPPPKVMWKHAKAGIGNPQQYHTVPLTGRIQIMNNGSLLIRHVLEEDRGFYLCQAS
NGVGSDISKSMVLTVKIPAMITSHPNTTMAKKGHVKELNCTARGEWPIIIRWERGDTVID
PDRNPRYSITTSPNEKTDEVLSTLKLKPAEREDSVFFSCHAINSYGEGRGLIQLTVQEPP
DPPELEVREVKDRSMNLRWTQRFDGNSVITSYDIEYKNKTDSWELKHATRNISPTNNQAN
IVDLHPASVYSIRMYSYNSIGKSEASKELTISTEEAQPDGPPMDVILQPVTSQSIRVTWK
APRKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQA
FNRAGTGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRV
VFWAVFPDGGVLKWGEMQNITTTKEQVELRDLEKFTNYSIQVLAYTQAGDGVRSNVLYIQ
TREDYPGPPAGIKAVPSSASSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPLPSEYEANP
ELLFYRITHLNHRQQYLIWAAAVTTAGRGNFSEKVTVEPAAKAPAKILSFGGTVTTPWMK
EVRLPCSSVGEPTPTIKWTKDSEDTAIPVSLDGQRLILANGTLVLRSVKAEDSGYYTCTA
TNTLGFDTIIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNT
EEWKDVFISSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQ
PVFTHINSSHARLNLQGWASGGCPISAVTLEFRPKNTWTWQSVRTNATTDVFLAELREAT
WYELKMKACNSAGCGNQSSEFATLDYDGSTIPPIKSPQEKNDDVKKLFSIGCPVILVTLG
VALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLL
IEDKEGIKQIGEDKATIPVTDTEFNQTGNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPG
TNPVSRKSVKSTHSIRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSA
SLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMT
TGTNDNADSMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAKSDYCNLPLYMK
SDPFFRKQSEHHDPCPVVPPREASIRGLAQRAYHTQGRHVTMDSAKQQALTMGHSGLSNL
TSSGASSGGATGGGGSGGISASSSSSTLPQRTLTMPGSSASVAQSAAAAAAATAAAAGAS
SSSGGGGAAGATGGTPGGASSSSSKMGGSRDSLLESSSSGLGRLQKQRDGGAGAYSKSYT
LV
NT seq
6309 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttacttctgctgtattctttgcaagaagtcaacagtgaggatgtt
gtctctacgcggctgtactttgtgaacgcctccctgcagcgggtgaccttctccagctcg
gtgggggtgtccctgccctgccctgcgggcggcgccccccatgccgtcttgcgctggtac
ctggccgccggagacgacatttacgacgtgccccatatccgccacgtgcatgccaacggc
accctccagctctaccctttctccccctccgcctataacagcattatccacgacaacgag
tacttctgcacggctgagaaccaagcaggcaagattcgaagccccagcatccacatcaaa
gcagtgttcagggagccctacacagtccgtgtggccgaccagcgctccatgcggggtaat
gttgccgtgttcaagtgcctcatcccctcagccgtccaggagtacgtcagcgtggtgtcc
tgggagaaagacacagtctccatcatccccgtgtgtgcggcttgtgtgtataaaggtaac
cgtttcttcctgacctcattcggcgccttgtatatctcagaggtgcagaaggaagatgct
ctgtccacctaccgctgcatcacaaagcacaagtacagtggagagactcgccagagcaat
ggagccaggctctctgttatggaccctacggagtccaccccatcagtgctggacagtttc
cagtccggtgaggtgcaggtggggcacagcgtggagctgccctgcatcgcctccggatat
ccaaaccccaccatccgatggctaaaggatggtcggccattaccggcggactcccgctgg
acacggcgcaccaccggcctcacaatttctgatttgaggctggaggacagcggcaattac
atctgcgaagtcaccaacagctttggctccaaagaggtgacgggtcacctcaacgttata
gagccgctgcgggtcaccttgtctcccaagaacctgaagacggggatcagcagtactgtc
atcctgtcctgtgccgtccaaggttccccccactttactgtgtcctggtaccgtaacaca
gaacctgtcctgcccgatcagcacttttccatccagggggctcacaatgagacactcttc
atttctgctgcacaaaagagacactctggagcttatcagtgctttgccacgcgcaagggc
cagactgcccaggacttctccatcatactgctggaagatggtacaccccgtatcgttgct
tccttcagcgagagggtggttgtcccaggtgaaccattttccctgatgtgtgccgccaaa
ggagcacccccgcccaccatcacctggaccctggacgacgagcccgtggcccgggacctg
tcgcgtgtcagagccagccagtacacgctctcggacggcagcaccgtgagccacgtcaac
gtcagcagcccgcagattcgcgatggaggagtgtatcggtgcgccgcacgaaactcagct
ggtagtgctgagtaccaagcgcgcataaacgtaagaggtcctccgaggattcggcctatg
aagaatattactgcagtggcaggaagaaacacttttataaactgccgtgtgattgggtat
ccttattactcaattaactggtacaaggagggacttctgctgcctgacaatcatcgccag
gtggtgtatgagaacggaactctgaagctcagtgatgttcagaaggggatggacgagggg
gcctacgtctgcagcgtgctgatccaaccacagcttttcatcacgcagactgtttatgtc
actgtcaaagttcctccactgatccagccatttgactttcccccgacttccatcggtaaa
ttgatgtacatcgcctgcgtggtgtcgtctggagacatgcccatacgcatcacgtggcgg
aaggatggccaggagatcgtgccctcctcgggcatcaccatcgacacaaaggagtttatg
agttccctccagatatctaaggtgtcgctcaaacacaacggcaactacacctgcattgcc
agcaacgatgctgccactgtcagcacagagaggcagctcacagttacagtgcctcctcgg
tttgtggtgcagcccaacaaccaggatgggatctatggcaaggcaggaatcttaaactgt
tctgttgatggataccctcctcctaaggtcatgtggaaacatgccaaggcgggtattggg
aacccacagcagtaccacactgtgcctctgacgggccgtattcagatcatgaataacggc
tctctgctcatcagacatgtcctggaagaggatcgtggcttctacctctgtcaggcctcc
aatggggtgggctcagacatcagcaagagcatggtcctcacggttaagatccccgcgatg
atcaccagtcaccccaacactaccatggctaagaagggtcatgtgaaggagctgaactgc
acagccaggggagaatggcccatcatcatccgctgggaaagaggcgacacggtcattgac
cctgaccgcaacccccgatactccattaccaccagtcccaatgaaaagaccgacgaggtg
ttgtctacactcaagctaaagccagcagagcgtgaggattccgtcttcttctcctgtcat
gccatcaactcttatggagaaggacgaggccttatccagctcactgtgcaagagcctcca
gaccctccagagttggaggtccgagaagtgaaagatcgtagtatgaatctcaggtggaca
cagagatttgacggaaacagcgtcattacctcttacgatattgaatataagaacaagaca
gactcctgggaactgaaacatgccactcgaaatatctctcccaccaacaatcaagccaac
atagtggaccttcaccctgcctctgtctacagcatccgcatgtactcctacaattctata
ggcaagagtgaggccagtaaggaactcaccatcagcacagaggaagcacagcctgatggt
cctccgatggatgtgatcctgcaaccagtcacctctcagagtatcagagtcacctggaag
gctccaaggaaggagctgcagaacggggtgatccggggttaccagattggttacagagag
aacggcccaggcagcaatggccagtacagcattgtggagatgaaggccactggagacagt
gaggtctacaccctggacaacctgaagaagtttgcccagtatggtgtggttgtccaggct
ttcaacagagccggcacagggccctctagctcagagatcaatgctacaacactggaagat
gtgcctagtcagcctcctcagaatgtgcgagccatctctgtaacatctgacgaggcagtg
atcacatgggccgagcctccgagactgacactgcacggcgtgttgaagggatatcgtgtc
gtgttttgggccgtcttcccggacggaggtgtgttgaagtggggtgagatgcaaaacatc
actaccaccaaagagcaggtggagctcagagacctggagaagttcaccaactacagcatc
caggtgctggcctacacccaggctggggacggcgtccggagcaacgtcctttatatccaa
acccgcgaagactaccctggacccccagctggcatcaaagctgtgccctcctctgccagc
agtgtcgtagtgtcgtggttaccccctcataagccaaatggaatcatccgcaagtacacc
atctactgctccagccccggctcaggccaaccgctgccaagcgagtacgaagccaatcca
gagctgctgttttaccgaatcacccacctcaaccaccggcagcagtacctgatctgggct
gcagctgtaaccactgcgggccggggtaacttcagtgagaaggtcactgtggagccagca
gccaaggccccagctaaaatcctgtcatttgggggtacagttacgactccttggatgaag
gaggtgcgactgccctgtagctcagtaggggaacctacacctaccataaaatggaccaaa
gacagtgaggacacagccatcccagtgtctctggatggacagcgtctcattctggccaat
gggacactggtgctgcgctctgtcaaagctgaagattctgggtactacacctgcacagcc
accaacacgctgggatttgacactatcatcgtcaaccttttggtacaagtccctccagac
cagcctcgtctaaccgtctccaccacctccacctcctccatcactctggcttggatacca
ggagacaacggaggcagctcgatcagaggttttgtgctgcagtactctgtagacaacaca
gaggagtggaaagatgttttcatcagttctagtgaacgctcctttaaactggacaacctg
cgctgtgggacctggtataaagtcaagttggctgccaagaacagtgttggtgccggacgg
atcagtgagatcatagaagcaaagacccacgggcgagaaccccagttcaacaaggatcag
ccggtcttcacccacattaactccagccacgcccgcctcaacctgcagggttgggccagt
ggaggctgtccaatcagcgctgtcacactggagtttagaccaaaaaatacatggacatgg
cagagtgtgcgtaccaatgctaccacagatgtgttcctggcagaactacgagaagcgact
tggtatgagctgaagatgaaagcgtgtaacagtgctggctgtggcaaccagagctcagag
tttgcaacactggactatgatggcagcacaattcctccgattaaatccccccaggaaaag
aacgacgatgtcaagaagctgttttctatcggctgtcctgtgattttggtcactctcggt
gttgcactgctcttcatcattcgcaagaaacgcaaagaaaagagactgaagagactgaga
gatgccaaaagcctggcagagatgctaatcagtaaaaacaaccgcagctttgacacccca
gttaaaggacctccacagggcccacggttacacatcgacattcctagagtgcagttgcta
attgaggacaaagaaggcatcaagcaaattggtgaggacaaggccacaatccctgtgaca
gacacagagttcaaccaaaccgggaaccctcagagcttctgcactggtgtgtctgtccat
caccccgccctcatccagaacaccggtcctttgattgacatgtccgacatcagaccagga
accaacccggtgtcgaggaagagtgtcaagtcaacccacagcatcaggaaccgctactcc
agtcagtggactctgaccaaatgccaggcctccacgccagcccgcactctcacctcagac
tggcgcacagttggctcccagcatggcatcactgtcacagagagtgacagctatagcgcc
agcctctcacaggacacagataagggtcgcaacagcatggtgtcgacagagagtgcctcg
tccacctacgaggagctggcaagagcatatgagcatgccaagctggaggaacacctgcaa
catgccaaatttgagattacagagtgctttatctctgacagctcatctgatcagatgacc
acaggtaccaatgacaatgcagacagcatgacgtctatgagcacaccgtcagagcctggc
atctgccgtttcactgcctcgccgcccaagccccaagactatgaccgtggcaagaatgta
gctgtgcccattccacaccgcgccaagagtgactactgcaacctacccctctacatgaag
tcagatccctttttccgaaagcagtcagagcatcatgacccatgtccagtggttccacca
cgtgaagcctctattcgtggcctggcccaacgtgcataccacacccagggccgtcatgtg
actatggactctgcaaaacaacaggccctgaccatgggccactctggcctgtccaacctc
acttcctctggggcttcctctggaggagcaacaggagggggaggtagtggggggatatct
gctagttctagcagctccacacttccccagaggactctcaccatgcctggctcctctgcc
tcagtggcccagagtgcagcagcagctgctgctgctactgctgcggctgctggggcatca
tcatcctccggtggaggtggggcagcaggggccacaggagggacccctggcggtgcctcc
tcatcttcctccaagatgggaggatccagagactctctcttggagagcagctcctcgggc
ttaggcagactacagaagcagagggatggaggggcaggggcttactccaagtcctacaca
ctggtgtag
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integrated database retrieval system
