Brachyistius frenatus (kelp perch): 138625615
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Entry
138625615 CDS
T10614
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfre03000
]
138625615 (hnf1a)
Transcription factors [BR:
bfre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
138625615 (hnf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
Homeobox_KN
HTH_5
Motif
Other DBs
NCBI-GeneID:
138625615
NCBI-ProteinID:
XP_069562735
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MEGEERAGAAKVRSSCLTALQEQLIWALLESGLSRDVLVQAMGELERNRTSGGAEKAERG
DGESSEEGEMDFPPPIFRDLEKLPPDEASKLRAEVDQLLQEDSWHVAKMVKSYMQQHNLP
QREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYTWYVKKRCEISQQFTNAKHGLASMEE
HGEETKKGRRNRFKWGPASLQILFHAYERQKNPSKEEREVLVEECNRAECIQRGVSPSQL
AGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTPFTSQSASSSHPGLPPSPEHGVKYSQ
QISCETMSSARGSAGDRVGRLVVSPVQLEPSHTLLETHNPKPVSSGGPLPPVSTLTSLHS
LSASPASSQGLIMASVPSVMSFGESSLLIGLTSTQPQTVPVINNMGGGFTTLQPISFQQQ
LHASSQQPLSHQLHSHMAASPFMATMAQLPCHMYNKSDSPQYHPSSLLSQAMVITDSSSL
GTLTSLAAVRQILTADPEEETDPPLQEESLHLQPHTPVPASSESLELYPASQTTESHQSH
LLSPSPTDISSYIPSQMVSTAQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaggagagggccggggctgccaaagtgaggtcgagttgtctgaccgcgctt
caggagcagctgatctgggccctgctggaatcaggactatcccgggacgtcctggtccaa
gccatgggggagctggagcgaaacaggacgagtggcggcgctgagaaggcagagagggga
gatggagagagctccgaggagggagaaatggatttcccaccacctatattccgagacctg
gagaagcttcctccggacgaggcatccaaactgagggctgaagtcgaccagttactgcag
gaggactcctggcatgttgcaaaaatggtgaaaagctacatgcaacagcataacctccct
cagcgagaggtggtggagtccacagggctcaaccagtcccacctctcccagcacctcaac
aaaggcacgcccatgaagaaccagaagagagctgctctgtacacctggtacgtcaagaag
cggtgcgagatcagccagcaattcaccaatgccaaacatggccttgcatctatggaggag
cacggagaggaaacaaagaaaggacggaggaacaggttcaagtggggtccagcatccctg
cagatcctcttccacgcctacgaaagacagaagaaccccagcaaagaggagcgagaggtg
ctggtggaggagtgtaacagggcagagtgtatccagaggggcgtgtctccttcccagctc
gctggtctgggctccaacctggtcaccgaggtccgagtatacaactggttcgccaaccgc
cgtaaagaggaggcctttcgtcacaagctggccctcgacacacctttcaccagccaatct
gcgtcctcttctcatcccggccttcctcccagtcctgagcacggtgtgaaatacagccag
caaatctcatgtgaaactatgagctcagctcgaggcagcgcaggagacagagtgggacgt
ctcgtggtcagtccggtccaactggagcccagccacacactcctcgagacccataacccc
aagccggtgtccagcggtggcccactacccccagtaagcactctgacctccctgcacagt
ctgtctgcctcccctgcatcctcccagggcctcatcatggcctcagtgcccagcgtcatg
agtttcggggagtcctctcttctcatcggtttgacctccacgcagcctcagaccgtgccc
gtcataaacaacatgggcggcggcttcacaactctgcagcccatctcgttccagcagcag
cttcacgcctcatcacagcagcccttatctcatcagcttcacagtcacatggctgccagt
ccgttcatggcaaccatggcgcagctgccatgtcacatgtacaacaagtcggactcgccc
cagtaccacccgtccagtctgctgtctcaagccatggtcatcactgacagcagcagcctg
ggaactctgaccagcctcgctgccgtcagacagattctgacagcagatcccgaggaagag
acggacccacctttacaggaagagtctctacacctgcagccgcacacacctgtgccagct
tcttctgagagcctcgagctgtatcctgcctctcagacgacagaaagtcaccagtctcac
ctcctctcaccttcaccaacagacatcagctcctacatcccttcacaaatggtctctacg
gcacagtaa
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integrated database retrieval system
