Brachyistius frenatus (kelp perch): 138625824
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Entry
138625824 CDS
T10614
Symbol
lmo7a
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
138625824 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfre04121
]
138625824 (lmo7a)
Ubiquitin system [BR:
bfre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
138625824 (lmo7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
DAP
Motif
Other DBs
NCBI-GeneID:
138625824
NCBI-ProteinID:
XP_069563120
LinkDB
All DBs
Position
Unknown
AA seq
1443 aa
AA seq
DB search
MEWREQSAVSCDEAYLEAHRWIEAVTKKKFGSNDFRSALENGVLLCDLINKIKPGIIKRV
NRLPTPIAGLDNLNVFLKACGKLGLKEAQLFHPGDLQDLSTRVTVQHQETNRRLKNVLIT
IYWLGRRAQSDRFYDGPFLNFKAFEGLLGTALYKALQESAGQKGSNVRDSGFGDSWYSER
EELYHLRGGEGGGHRRDDSLDSLDSLGSRPHSISSDATLKGSSEGCCSDTEADSVFRMAE
NKDSLSYRRSLVITPKASAQFNQFLPTKDKSSAYVPAPLRKKRAERNEDSRRSWASSPYT
EDEVPLIRQHHMQESIDGSKSTSDILAEPAINRQVHYEEMQKFREQTKESDDKWQDDLSK
WKNRRRSVNSDIVKKKEEREKIEQTTYSSNQRSKTFKQMQEEREGKGKNSVGSRLGSLSY
LDEDVFEKPVEDVFEKPVASPRTRTSPARSYTIDTPYYSSEPSKPSLKVEEPPAASPATG
KAASLPTSREVYIVDSPAGSNSTTTTFTPTITPTRPSSVNSSKPPAAQQRSRVSVHTSTA
KKEEAISVLSSLQKVPDPRRSLLSIPTKVEAPSSGSLYKQQPQLSSMEPKPPGVSRVPAS
LPRSYQRSDSTRLTSVVTPRPFGTQASRITSLPRAFTMDDPHKRVNGDVDVPKKSSVPSR
YQQFLTSEDEAHSSSAHSSEGEEEETAKSVTSIQSVSPVPPQVKSEVPSSPAPAKDTSQE
NYCETRISLNQKPNSCKDFGFQATWDSTGARVTSLQPGSSAEMCQLQIGDEVLTVNGQQV
AEMSYTEWKSCMEEAVQEGSLVMDIRRHGQNNWDRDQPSLPFKSHKTINLTSTDHPILLG
SSETNTVKSSLDFTSRISTETLSSKVAPARPVVELASNRVNGGLRKEPVTMRNKESEPIS
LKNLKRRSEFFEQGGSESVMPDMPVPSITPSSSRWSWDLEEERRRQEKWQKEQERLLQEK
YKRDQEKLQEEWVKAQQDISPGRDQQQATKPVSLEVNSHSVGPHSPLSPVHQPTSPLWEQ
EERKERAEQERQRQAEERRKEKERELQRLQEERKRRERQEEERKRREEEEQRWQRREEER
RRQEAAEQQRRERERAFEQQQQQQQWAGGSHSFDNVQPPLSFTDRAKSKSSPQLDEEDKP
QRNGVYAQPVGMAHWLLEEQLRSKRDRQAQSARAASELELERRNILNAMRYREPERVTGG
GVEERRGQLPASQAEAERQQILNEMKKKTPLLTDSSWIRQSSASTAANKETDGQPMRRGE
SLDNLDFSYNSGRSSWTSRSSSYGQNYSRRPHSALSDSTSFYGGVSGPQRPGSSTLPSSY
SMGSLRGGAGTPSSPWSRQSPSPSPSSLSPTTSPEPLSEASQQRSRSVSGKKICTFCDTP
LGKGAAMIIESLGLCYHLGCFKCIGCKSDLGGSEAGAEVRIRNKQLYCNSCYMRFKTGQP
TAM
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgtgaacagtccgctgtcagctgcgacgaagcctacttggaggcgcacaga
tggattgaggcagtaactaagaaaaaatttgggagcaacgacttccgatcagcgctggag
aatggcgttctgctgtgtgatctaatcaacaagatcaagcctggtattatcaagagggtg
aacaggctgcccacacctatcgctggcctggacaaccttaacgtcttcctcaaggcctgc
gggaagctcggactaaaggaggcacagctgtttcaccctggagatcttcaagacttgtcc
acaagagttacagtccagcatcaagagaccaacaggaggctgaaaaatgtgttgatcacc
atttactggctgggtagaagagctcagagtgaccgtttctatgatggacccttcctgaat
ttcaaggcatttgagggattattgggcacagcactgtacaaggctctgcaggaatcggcc
ggtcagaaaggcagcaacgtccgagacagcggctttggggatagttggtactcggagcga
gaggagctctaccatctgagaggaggagaaggaggcggacacagaagagacgactccctg
gacagcttggactctctgggctcccgaccccacagcatctcatctgacgccactctgaaa
ggcagcagcgagggttgttgtagtgacactgaggcagactccgtcttcaggatggccgag
aacaaggacagtctcagctaccgccggtcgctagtcatcacacccaaagccagtgcccag
tttaaccagttcctgcccactaaagacaaatcttcagcctacgtacctgctccgctgagg
aagaaacgggccgaacgcaatgaggacagccggcgcagctgggccagctccccatataca
gaggacgaagtcccactcatcagacagcaccacatgcaagagagtatcgacgggagtaaa
tcaacaagtgatatcctggccgagccggcgatcaaccgacaggttcactatgaagagatg
cagaagtttcgggagcagactaaggagagcgatgataagtggcaggatgatctgagcaaa
tggaagaacaggcgccggagcgtcaactctgatatcgtgaagaagaaagaggagagggag
aagatagagcagaccacgtacagcagcaaccaaaggtccaagaccttcaagcagatgcaa
gaagagagagaaggtaaaggaaagaacagcgttggcagtcgactcggatctctctcttac
ttagacgaggacgtgtttgagaaacccgtcgaggacgtgtttgagaaacccgtcgcttcc
ccccgcactcgaacctctcctgccagaagctacactattgacactccttattattcctcg
gagccgtctaagccctctttgaaagtggaagaaccccctgctgcttctccagcgactggc
aaggccgcctcccttcccacctcacgggaagtgtacatcgtggacagtcctgcaggcagc
aactctacgaccaccaccttcactcccaccatcactcctaccaggccaagctcggtaaac
agctccaagcctccggctgctcaacagagaagtcgtgtctcggtacacaccagcacagcc
aagaaagaggaggccataagtgttctctcctccctacaaaaggtgcccgatccaaggcgc
tcattgttgagtataccgactaaggtggaggccccctcctctggctctctgtacaaacaa
caaccacagctcagctcaatggaacccaagcctcccggggtgtctcgggttcccgcctcc
ctccccaggagctaccagagatcggatagcacacgcctaacctcagttgtcacaccgagg
cccttcgggacccaggcctcccgcatcacctctcttccccgagcctttacaatggacgac
ccacacaagcgtgtcaacggtgacgttgatgttcccaagaagtcgtcagtgccgagccgg
tatcagcagttcttgacctctgaggatgaagctcactccagctcggcacacagcagcgaa
ggagaggaggaggagacggcgaagagtgtcacctctattcagagcgtctcgcccgtccct
cctcaggtcaagagtgaggttcccagcagtcctgctccagccaaagacaccagccaggag
aactactgtgagacgcggatcagcctgaaccagaagcccaacagctgcaaagactttggc
ttccaggcaacctgggactcaacaggagctcgggtgacctccctccagccaggtagttca
gccgagatgtgccagcttcaaatcggggacgaagtgctgacggtgaacgggcagcaggtg
gcagaaatgagctacacagagtggaagtcgtgcatggaggaggctgtgcaggagggcagc
ttggtcatggacatacgccgtcatggccaaaacaactgggacagagaccaaccttccctg
ccatttaaaagccataagaccatcaatctgaccagtacggatcatccgatacttctaggt
tcctctgaaacaaacacggtcaaatccagcctggatttcacttcacgcatttccacggag
acgctgtcatccaaggtggccccagctcgtccagttgtcgaactggcttcaaacagagtt
aatgggggactccgcaaggagccagtgaccatgaggaacaaagagtcagaacccatatct
ctgaaaaacttaaaacggagatcagagttttttgaacaaggaggatcagagtctgtgatg
ccagatatgcctgttccctcaatcactccatcatccagccgctggtcttgggacctggaa
gaggagcgcagaagacaagagaaatggcagaaggaacaagaacgcctccttcaggagaaa
tataagcgcgatcaggaaaaactgcaggaggagtgggtcaaggctcagcaggacatttcc
ccaggcagggaccaacaacaggcgacaaagcccgtgagcctggaggtgaacagccacagc
gtcggcccacactcgcccctgtctcctgtccaccagcccacgtctcctctttgggagcag
gaggagagaaaggagagggcagagcaggagcgccaaaggcaggcggaagagaggaggaag
gagaaagagcgagagctgcagcgtctccaggaggagaggaagaggagagagaggcaggag
gaggagaggaagagaagggaggaggaagagcagagatggcagaggagagaggaggagagg
aggcggcaggaagctgcagagcagcagcgcagggagagagagcgagccttcgagcagcag
cagcagcagcagcagtgggctggtggctcccacagctttgacaatgtccagcctccactg
tcctttacagacagggcaaaatccaaatcatcaccccaacttgatgaagaggacaaacct
cagaggaacggtgtgtatgcgcagccggtgggcatggcacactggctgctggaggagcag
ctgaggagtaagcgtgacagacaggcccagagtgcgagagctgcatcagagctggagctg
gaacggaggaacatcctcaatgccatgagatacagagagccagagagagtgacaggcggt
ggagtggaggagaggaggggtcagctgcctgcgtcgcaggctgaggcagagagacagcag
atcctgaacgagatgaagaagaagactcccctgttgacggacagcagctggatccgccag
agctccgccagcactgccgccaacaaggagactgacgggcaacccatgcgcagaggcgaa
tctcttgacaacttggacttctcctataactccggccgctcatcgtggacatccaggagc
agctcttatggccaaaactactctcggcggcctcactctgccctctccgacagcacttcc
ttttacggtggcgtgtcggggccccagcggcccggctcctccactctgccttcctcttat
tccatgggctccctccgaggtggggcaggaaccccctcgtccccttggtcccggcagtca
ccttccccctcaccctcttctctgtcacccaccacctctccggagcccctgtctgaggcg
tctcagcagcgcagcaggtcagtgagtggcaagaaaatctgtacattctgtgacaccccg
ctgggaaagggagcagccatgatcatcgagtcccttgggctctgttatcatttgggctgt
tttaagtgtatcggctgtaagtctgaccttggaggatcggaggccggggctgaagtcaga
atacgaaacaaacagctttactgtaactcctgctacatgcgattcaaaactggccagcca
acagctatgtga
DBGET
integrated database retrieval system
