Brachyistius frenatus (kelp perch): 138626151
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Entry
138626151 CDS
T10614
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfre03000
]
138626151 (sox1a)
Transcription factors [BR:
bfre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138626151 (sox1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
138626151
NCBI-ProteinID:
XP_069563712
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTTTGQTGPNSGSKANQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLSGPSGGGGVGLGVGMSSSGVGQRLESPGGHGGSAGSGYAHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGAHHHHHSHHHHSHNPQPMHRYDMTALQYSPISNSQ
SYMNASPSGYGGITYTQHQGSGVSSSAAMGTLGSLVKSEPSISPLLE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaactgaccttcattcccccggcccccaaacgaacacgacc
acggggcaaacggggccgaatagcgggtccaaagcgaatcaggaacgggtgaagagaccg
atgaacgcattcatggtgtggtcccgagggcagcggagaaagatggcacaggagaacccc
aaaatgcacaactctgagatcagcaagcggctgggcgccgagtggaaggtgatgtccgag
gctgaaaagcgccctttcatcgacgaggcgaaacggttgcgagccatgcacatgaaggag
catccggattacaagtatcggccaagacggaagaccaagacgttgctgaaaaaggacaaa
tactctcttgccggtggactgctttctgggcccagtggtggcggtggagttggtttaggg
gtcggcatgagttcatccggggtcgggcagaggttagagagccccgggggtcacggaggc
tccgccggctccggctacgcgcacatgaacggctgggcgaacggtgcgtactcggggcag
gtggctgcagccgcggctgccgcagcgatgatgcaggaggctcagctagcctacagccag
cacccggggagcggagcgcaccaccaccaccactcacaccaccatcactcacacaacccc
cagcccatgcaccgctatgacatgacagccctgcagtacagccccatctcgaactctcag
agctacatgaacgcttctccatccggctacggcgggatcacctacacacagcaccagggc
tccggcgtctcctcctcagctgccatggggacgttagggtcgctggtgaagtcggagccg
agtatttctccgttgctggaatag
DBGET
integrated database retrieval system
