Brachyistius frenatus (kelp perch): 138626274
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Entry
138626274 CDS
T10614
Symbol
msh3
Name
(RefSeq) DNA mismatch repair protein Msh3 isoform X1
KO
K08736
DNA mismatch repair protein MSH3
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
138626274 (msh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfre03400
]
138626274 (msh3)
DNA repair and recombination proteins [BR:
bfre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
138626274 (msh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Mo-nitro_C
Motif
Other DBs
NCBI-GeneID:
138626274
NCBI-ProteinID:
XP_069563910
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MPKAVKKSCTTQTSISRYFGGLSSSSSLSDNTQRGINQNPGERQLSRGKKLSSDDDDFGL
ATKRAKFSVKDQQLGDLECEPASCQSTKETKLTSSRGAGSLCSSTLEKLKSFICVAEPSV
SHSHTQEETDGASSKICGQERNVWPPCGVSDQHRPTNRLQQAEEECEDEEEEVKEKEGSG
LVATKQGLLLSQFAKSGGGGGAGRAAEPSPLSDSCTSSRRSKSVYTPLEQQVIQLKQQHK
DALLAVECGYKYRFFGEDAEIAAKELNIVCHLDHNFMTCSIPTHRLFVHVRRLVSHGHKV
GVVKQTETSAIKASGANRNALFTRQLSALYTKSTLVGEDVNPVCRLGEVEEGYGDVVSDP
PDSFLLCVSESWDKVKKQLTVGLVAVQPSTGDVLLDYFPDGPSRSELEGRVLKINPVEIL
VPSDLTEQSHRLLQSITNASAQADDRVRVEKRDSAQFEFTSAMNTVTEFYCHTQEKGSRS
LSSVASLESPVICCLGPLIRYLQEFSLERVLRSESSFRRLSCELEGMMLSAATLRNLEIL
NNQTDGSVKGSLLWVLDHTRTPFGRRLMRKWVSQPLTDPQSISERQDAVQEILESHSLTL
NSVRSLLSHLPDLERGICSIYHKKSSTQEFYLISSSLSRLGLELQTLLPAVQSQISSALL
HSLLLDTPDLLVPAHSFLKVLNEKAAKAGNKLELFSDLSGFPVLQERREQIQTVLSEIQD
HRKDIRLTLKARALDYTTVSGQEFLIEVKNSLSSTVPPDWVKISSTKAVTRYHSPFLVDR
YKKLLQLREQLLLDCQREWTNFLDQFGERYHTMKRAISHLATMDCLFSLAEVAKQGDYCR
PKMCEDQHQIMIRDGRHPAIDLLMGEHNQYVPNHTELQRDGRRTMIITGPNMGGKSSYIR
QVALICVMAQMGSYVPASEACLSILDAVYTRMGASDNIYKGRSTFMEELTEASEIISRVT
ERSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKALTLFVTHYPPLCELERMYPDHVSN
YHMAFLLNEPDISTDTDGEEVQPEFITFLYQLTEGAAGRSYGLNVARLADIPDLILHTAA
RKARELESMVNARRKIKKLLSDLWSISDRSCLLEWLQSNS
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggctgtgaaaaagtcgtgcaccactcagacctccatcagcaggtacttcgga
ggactgagcagcagcagcagtttgtccgacaacacgcagcgtgggattaaccaaaaccct
ggtgagcgccagctctcaagaggcaagaaactgtcctccgatgatgatgattttggattg
gcaaccaaacgagctaaattttctgtcaaagaccagcagctgggggatctggagtgtgag
cccgcgtcctgtcaaagcactaaagagacaaagctaacatcgagccgaggagcaggaagc
ctttgttcctccaccttggagaagctgaaaagcttcatctgtgtagctgagcccagtgtc
agccacagtcacacacaggaagaaacagatggtgctagcagtaaaatctgcggccaagaa
aggaacgtttggcctccctgcggtgtctcagaccaacacagacccacaaacagactgcaa
caggcagaggaggagtgtgaggatgaagaggaggaggtcaaagaaaaggagggttcagga
ctggttgctacaaaacaggggctcctcttgtctcagtttgccaagtcaggcggaggagga
ggagcaggaagggctgctgagccgagtcctctgtcagactcttgcacctcctccagacgc
tcaaagagcgtatacactcctctggagcagcaggtcatccagctgaaacagcagcataag
gatgccttgctggctgtggagtgtggttacaagtacaggttctttggagaagatgcagag
attgctgcaaaagagctgaatatcgtgtgtcatctggatcataacttcatgacgtgcagc
atccccacacaccgcctctttgttcatgtcagacgtttggtgtctcacggtcacaaggtt
ggtgtggttaagcagacagagacgtctgcgatcaaggcctcaggggccaataggaacgct
ctgttcacacgtcagctcagcgccctttacaccaagtccactctggtgggagaggatgta
aaccccgtctgcagactcggggaggtggaggagggatatggtgatgtggtgtcggaccct
cccgacagctttctcctgtgtgtcagtgagagctgggataaagtgaagaagcagctcact
gtggggctggtggcggttcagcccagcacaggagacgtgttattggattatttccctgat
ggtccatctcgctctgagctggagggccgtgtcctaaagatcaaccccgtggagatcctg
gtgccatctgacctcaccgaacaaagccacagactcctgcagagcatcactaatgccagt
gctcaggctgatgaccgagtgagagttgaaaagagggacagcgctcagtttgagttcacc
tctgcaatgaacacagtcacagagttttactgccacacccaggagaaaggctctcgctcg
ctgtcgagtgtagcatccttagagagcccggtgatctgctgtctggggccgctcatccgg
tacctccaagaattcagcttagagagagtgcttaggagcgagagctcattccggcgtctc
tcctgtgagttggaggggatgatgctcagcgccgccactctcaggaacctggaaatcctc
aacaatcagacagatggtagtgtgaagggaagtctgctgtgggtgttggaccacactcgc
accccgtttggaaggagactgatgaggaagtgggtgagccagcccctcacagacccgcag
tcaatctcagagaggcaggatgctgttcaggaaatcctggagtcgcactctctcacttta
aactctgtcagatccctgctgtcacatctgcccgacctggagagaggcatctgcagcata
taccacaaaaagtcctcgacgcaggagttttacctcattagcagcagtctctctcgcctg
gggctggagctgcagaccttgctcccagccgtccagtcacagatcagctcagcgctgctc
cacagcctcctgctggacactcccgacctgctggttccagcccacagcttcctcaaggtg
ctcaatgaaaaggccgccaaggctgggaataagttggagctcttctcagatctgtccggc
ttcccggtgctgcaggaaagaagggagcagatccagactgtcctcagtgagattcaagac
caccgcaaagacatccgactgacgctgaaggcccgcgcacttgactacacgactgtctct
ggacaggagtttctgattgaggtgaagaactccctgtcatccactgttccacctgactgg
gtcaaaatcagcagcaccaaggcagtcaccagatatcactctccgttcctcgtcgaccgc
tacaagaagctgctgcagcttcgagagcagctgctgctggactgccagagggagtggacc
aattttctggatcagtttggggagcgctaccacaccatgaaaagggctattagtcaccta
gcaaccatggactgcctcttctcattggctgaggtggctaaacaaggggactattgcagg
ccaaagatgtgtgaagatcagcaccagattatgatcagggacggcagacatcctgctata
gacttactgatgggagagcacaaccagtatgtgcctaaccacactgaactacagcgtgat
ggcaggagaactatgatcatcactgggcctaatatggggggtaagagctcctacatccgc
caggttgccctcatctgtgttatggctcagatgggctcctacgtcccggcctccgaggcc
tgtctgagcatactggacgccgtttacaccaggatgggggcttcagacaacatctacaaa
ggtcgcagtacgttcatggaagagctgacagaggcgtcggagatcatttcccgagtgaca
gaacgctcgttggtcatccttgatgaactgggacggggcacaagcacccatgatgggatc
gccattgcctatgccaccctggaatacttcatcagagatgtgaaagccttaaccctgttt
gtcacccactaccctcctctgtgtgagctggagcggatgtatcctgaccacgtgtcgaac
taccacatggctttcctgcttaatgaacctgatatctccactgatacagatggtgaagag
gttcagccagagttcatcaccttcctctaccagttaactgaaggagctgcaggacggagc
tacggcctgaatgtcgcccggctggctgacatcccagatcttatactacacactgctgca
cggaaagcccgagagctggagagcatggtcaatgccaggaggaaaatcaagaaacttctc
tcagatctgtggagcatctcggacagatcgtgtctcctggagtggctgcagtcaaactcc
tga
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