Brachyistius frenatus (kelp perch): 138626393
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Entry
138626393 CDS
T10614
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138626393 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfre03041
]
138626393 (sf1)
Spliceosome [BR:
bfre03041
]
Complex A
Other components
Complex A specific factors
138626393 (sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
138626393
NCBI-ProteinID:
XP_069564097
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGGGNGLMPTPGPPGSFPSLQGFQPPIPNASFPQ
FNPATTFSTPAPQPPVAGAGLAKPDFGQKKSRKKSRWSSETPDQKTVIPGMPTVIPPGLT
RDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKKI
EEERHSLITEMVGLNPEFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNTLK
NIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNI
LKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKCGGA
GHISSDCKYTSTFAAHRATGGEPPQSAQDKARMDKEYLSLMAELGEAPVATSGGGHSSSQ
GGGPRSSGPNSNQQQMNRPPWMTASPSETRNFHNMHGGPGGHGGHGGHGGHHSYPPPMPS
MGGPPMPPNPNGLPPPWMQPPPPPMSQGPGPHGHPMGLLPPPMSMMPPPPPPPSSQPPPP
PSAPLPPWQQQAPPPPPTSSMATSTPLPWQQNTTTTSSPGTATLPPWQQPQQAAASGAQP
PPPMGTPSMVPPPPGVQPPLPPGAPPPPPPPPPGSTGMMYAPPPPPPPMDPSNFVTMMGM
GVPGMPPFGMPPAPPPPPPQN
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggagcaaatgcaactcctttagggaagttgcacccaagtatcggcgcgaaa
cgaggatttgacgccgggcccggtggggggaacggattgatgccgacaccagggccgccc
gggtcctttccttccctgcaaggttttcaacctccgattccaaacgcatcttttcctcag
tttaatccagcgacgactttttcgaccccggctccacaaccgccagttgcgggggccgga
ctggccaaacccgatttcggccagaagaagtcaaggaagaagagtcgttggagcagcgag
acgcccgatcagaagactgtcataccgggcatgcccactgtcattccccccggactgacc
cgagaccaagaaagagcatacatagtccaactgcagattgaagacctgactcgtaaactg
cgtacaggagacctgggaatccctgttaaccctgaggacaggtctccctctccagagccc
atctacaacagcgagggcaagaggttgaacacccgggaatatcgcacgcgaaagaagatc
gaggaggagcgtcactctctaatcaccgagatggttggactcaaccccgaattcaagccc
cctgcagactataagcctccagccaccagagtcaacgacaaagttatgattccgcaggac
gaatatcctgaaatcaactttgtcggtctgctcatcgggcctcgcggtaacacactgaag
aacattgagaaggagtgctgtgccaagatcatgatccgggggaaaggttctgtgaaggag
gggaaggttggccggaaagatggccagatgctgccaggggaggacgagcctctgcacgcc
ctggtcactgccaacacgatggagaacgtcaagaaagctgtggagcagattcgcaacatc
ctcaaacaaggcatcgagacacccgaagatcagaacgacctacgaaagatgcagctgaga
gagctcgctagactcaatggcacgctaagagaagacgacaacaggattcttcgtccttgg
cagaactcggagccgcgcagcatcaccaacacaaccctctgcaccaagtgtggtggagct
ggccacatctcctctgactgcaaatacaccagcacatttgctgcccacagagcgacgggt
ggcgagccccctcagtcggcccaggacaaggcccgtatggacaaggagtatctgtccctc
atggctgagctgggggaggccccggttgccacatctggcggaggacactccagttctcaa
ggaggagggcctcggtcctctggccccaacagtaaccagcaacagatgaatcggcccccc
tggatgaccgctagcccgtctgagaccaggaacttccacaacatgcatggagggcctggt
ggccacggaggacacggaggacacggaggacaccacagctaccctccccccatgcccagc
atgggaggaccacctatgccccccaaccccaatggcctgcctcccccctggatgcagccc
cctcctccccccatgagccagggacctggacctcacggacacccgatgggtctgctgcct
cctccaatgagcatgatgccgcctccccctcctccccccagcagccagccgcctcccccc
ccctccgctcccctgccaccatggcaacaacaggctccacctccccctccaaccagcagc
atggcaacgagcacaccgctgccgtggcaacagaataccaccaccacgtccagccccggc
accgccaccctgcctccatggcagcagccccagcaggcggcggcctccggagcccagccc
ccgccgcccatgggcaccccgtcaatggttccccctccccccggcgtgcagcccccgttg
ccgccgggcgcgccacctcctccccctccgccgcccccgggctctactggcatgatgtat
gcccccccgccgcccccgccgcccatggacccttctaactttgtcaccatgatggggatg
ggggttccaggcatgccccccttcggcatgcctccggccccccctccaccgccgccccag
aattaa
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