Brachyistius frenatus (kelp perch): 138626539
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Entry
138626539 CDS
T10614
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03022
Basal transcription factors
bfre03420
Nucleotide excision repair
Brite
Transcription machinery [BR:
bfre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
138626539 (gtf2h1)
DNA repair and recombination proteins [BR:
bfre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
138626539 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138626539
NCBI-ProteinID:
XP_069564343
LinkDB
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Position
Unknown
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLVLHTGESTTFHFSNDSTALKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLGGINNTDPTVNNNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYSENVPHNLTEKEFWTRFFQSHYFHRDRINTGTQ
DIFSECAKQDEKGLKSLVIQGVKNPLVDLLSLEDKTLEEGYGLSTTLPSTSNANRTVKES
SNSAIIKRFNHHSAMVLAAGSRKGEAPADQVSETSSTDGNSRDSDFFQPPVKKVKLQEAI
EYEDLQREKRPKTVALNLKKSDRYAHGPVPLQSQQYTTSQDIINSVNYIQHEMTNYKPNL
PQVLSSTAASSAIAALSPGGVLMNAGAQQAISQMVPSEVQGELKHLYVAAGELLRHFWSC
FPVNSPFLEEKVMKMKSNLERFQMTKLCPFQEKIQRQYLSANLTGHLEEMLQTAYSKFHV
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactatcggaggaggtgctgctggtggtgaaaaaggttcgtcagcggaagcag
gacggcacactatatctgatggctgaacgtatagcctggggtccagagggcaaagaccgc
ttcacagtcagccacctgtatgcagatattcgttgtcagaagatcagcccggatggtaaa
gccaaaattcagctgcagctggtccttcacaccggcgagagcaccacattccacttctcc
aacgatagcactgcactcaaagaccgagatgctgccaaggaactgctgcagcagctacta
cccaagttcaagaagaaagccaacaaggaactggaggagaaaaacaggatgcttcaagaa
gatcctgttcttttccagttatataaagaccttgtggtgagccaagtgatcagtgctgag
gaattctgggccaaccggttaggaggcataaacaacacagaccccacagtgaacaacaac
aaacaggaagttggtatatctggagcttttctggcagacattagacctcagacagatggc
tgcaatggtttacgatataatctgacagctgacatcattgaatccatcttcagaacatac
cctgcagtgaagcagaagtatagtgaaaatgtgcctcataacctgacggagaaggagttc
tggacccgctttttccagtcccattattttcacagagaccgcatcaacacaggaacacag
gacatcttctcagagtgtgccaagcaggatgagaaggggttaaagtctctggtgattcaa
ggagtaaagaatcctttggttgacctcttgtcattggaggataaaacattggaagagggt
tatggacttagcacaacactaccctcaacttccaacgcaaacaggacggtgaaggagagc
agcaactctgccatcatcaagcgattcaaccatcacagtgccatggtgctggcagcaggc
tcacgcaaaggggaagcaccagctgatcaagtcagtgagacgagcagcacggatggaaac
tccagggattctgacttctttcagcctcctgttaagaaggttaaattgcaagaagccatt
gaatacgaggatctgcaaagggaaaaaagaccaaaaacagtcgcattaaacctgaagaag
tctgacaggtatgctcatggccctgtgccacttcagtcccaacagtatacaaccagccag
gatatcatcaactctgtcaactacatccagcatgagatgaccaactacaaacccaacctc
cctcaggtgttgtccagcacagcagctagttctgccattgcagcgctttctccaggcggc
gtcctcatgaacgctggcgcacagcaagccataagtcagatggtacccagtgaggttcaa
ggagaattgaagcatctttatgtagctgctggagagttattgagacacttctggtcctgt
tttcctgtaaactcaccatttttagaggagaaggtgatgaaaatgaagtcaaaccttgag
agatttcagatgaccaagctttgtccttttcaagagaaaatccagcgtcagtacttgagt
gcaaatctcaccggacacttggaggagatgttgcagactgcctatagcaagttccatgtt
tggcaaacccgccggatgatgaggaaaacctga
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