Brachyistius frenatus (kelp perch): 138626676
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Entry
138626676 CDS
T10614
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03040
Spliceosome
bfre05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138626676 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138626676 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfre03041
]
138626676 (srsf5b)
Spliceosome [BR:
bfre03041
]
Common components
Common spliceosomal components
SR proteins
138626676 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
138626676
NCBI-ProteinID:
XP_069564587
LinkDB
All DBs
Position
Unknown
AA seq
295 aa
AA seq
DB search
MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGGGAGGRFSDRYGRGSQNSRSRNPPPMRTENRLIVEN
LSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNALEKLSGKEINGRKI
KLIEAAKKRSRSRSRSESSSRSRSRSRGRSPSRSPRRSRSPAKAHNRSRSRSRSRSGSPA
GGNSSPNPKSKEPPKRSSKTSKSATPPSPPAAQRASVSRSRSRSRSRSPSTDSQR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtgtcgtatcttcatcggccggctgagcccctcggccagggagaaggacgtg
gagaggttcttcaaaggatacggccgtatccgggacatcgacctcaagagaggcttcggg
tttgtggagtttgacgaccccagagatgccgaagacgccgtgtatgaactcgatggcaaa
gagctgtgcaatgaaagggtgaccatcgagcacgctcgcgtgcgcctgcgtggcggccgc
ggccgaggcggcggcggtgcaggcggacgtttctctgaccgctacggtcgaggatcccag
aacagtcggagtcgaaatcctcctccgatgcgcacggagaaccggctcatcgtggaaaac
ttgtcctctcgcgtcagctggcaggacctgaaagatttcatgagacaggctggagaggtg
acattcgcagatgcacatcgccctaagctcaatgaaggggtggttgaatttgcctcttac
agcgatttgaaaaatgctcttgagaaactgtcaggaaaagaaatcaatggcaggaaaatc
aagctcattgaagcagccaagaagaggtcgagaagtcgctcccggtccgagagctcctct
cgctcgcggtcccgttcccgcggtcgctctccatctcgctcgccccgacgctcccgcagc
ccggccaaggcccacaaccgctcccgctcccgctcccgctcccgcagcggctcgcccgcc
ggcggcaactcctccccgaaccccaaatccaaggagccccccaagcgctcctccaagacg
agtaagtcggccacgcctccctcccctccagccgcgcagagggcctccgtgtcccggtcc
cgctcccgctcccgctcccgctccccttccaccgacagccagcgttaa
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