Brachyistius frenatus (kelp perch): 138626852
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Entry
138626852 CDS
T10614
Symbol
trub1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfre03016
]
138626852 (trub1)
Enzymes [BR:
bfre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
138626852 (trub1)
Transfer RNA biogenesis [BR:
bfre03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
138626852 (trub1)
Prokaryotic type
138626852 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
GAIN_A
Motif
Other DBs
NCBI-GeneID:
138626852
NCBI-ProteinID:
XP_069564912
LinkDB
All DBs
Position
Unknown
AA seq
282 aa
AA seq
DB search
MAGNSAAPIASSLSKLQSLNGVFAIYKKQGPTSADVLNTLKETLLKEAGVQNPNPRKRKK
QSLKMGHGGTLDSAACGVLVVGVGNGTKMLSTLLTGSKKYVAVAELGKATDTLDATGSVI
LEKDFEHITRLDVEEKLKAFTGDIMQVPPLYSALKKDGQRLSVLLKKGHKVEAKPARPVT
VHNLTLQEFKPPLFTLDIECGGGFYVRSLVDDLGKALSSCAHVKDLTRTKQGPFTLQEHT
LHEERWTLEHILRALQPCSDGELASDDLNHQKATLEGHRDPE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaactctgcggctccgatagctagttctctatccaaactccaatctttaaat
ggagtatttgcgatatataaaaagcaagggccaacatcagcagatgtgctaaatacgctt
aaagaaaccttgctcaaggaagctggtgtccaaaaccccaacccacggaagaggaagaaa
cagagcctgaagatggggcatggagggacgcttgacagcgctgcctgtggggtgttagtt
gtcggtgttggaaatggcacaaaaatgctcagcacactgttgactggttcaaagaaatat
gttgctgttgcggagctgggaaaagcaacggacactcttgatgccaccggcagtgtgatt
ctggaaaaagactttgaacacataaccaggctggatgttgaggaaaagctgaaagccttt
actggtgacatcatgcaagttcctccactatactcggcgctgaaaaaagatggccagcgt
ttgtctgtccttctgaaaaaaggtcacaaagttgaggccaaaccagcccggccggtcaca
gtgcacaacctgaccctgcaggagttcaagccccccctcttcactctggatattgagtgt
ggtggtggattttatgtcagaagcttggtggacgacctgggaaaagctctgtcatcatgt
gctcacgtgaaggacctgaccagaacaaagcagggtccgttcaccctgcaggagcacact
ttgcacgaggagcggtggacgctggagcacatcctgcgcgcactgcagccctgctcggac
ggagagctggcgtcggacgatttaaaccaccagaaggcgacactagaggggcacagggac
ccagagtaa
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