Brachyistius frenatus (kelp perch): 138626879
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Entry
138626879 CDS
T10614
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfre03000
]
138626879 (zeb1a)
Transcription factors [BR:
bfre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
138626879 (zeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_6
Homeodomain
zf-C2H2_15
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
138626879
NCBI-ProteinID:
XP_069564941
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MADGPRCKRRKQANPRRSSATNFNNGLEASSDSDDEDKLHIVEEDSLQEPEGSHDAITVL
PHNGVKEECVSEEEEEEEEEVKDALVEEILQQGDTAVIYPEAPEDEQSPAETGGADENGT
PDSFSQLHTCPYCSRGYKRNASLKEHIKYRHETSDDNYSCSHCSYTFTYRSQLERHMSHH
RGSREQRHVSQTTGGTGGTGGTGGTGGTRKFKCTECSKAFKYKHHLKEHLRIHSGEKPYE
CSNCKKRFSHSGSYSSHISSKKCVGSAPPNGVTRSSIKSPPPTPASRPVVIAPARMILKE
KADSKPLQEQLPVTQIKSEPVEYECKPAMAAPATSAGGNGGAVQPATAPPPTLPQGVAVV
VPTVGLMSPISINLSDLQNVLKLAMDGNVLRQVLGSANGVVAGKPGVVVQQPQQQIISLP
AFVDHDGTTKIIVNYSISPAAAPLVVKSDPPPPPAAPTPAPTRTGKAPTPEVSDLTVVKM
EPEPVPVSETETLKTRQMPKASSTSTCLLCDDCPDHLEALHLLQHRKAANGEAVDSAALD
PSFAALLSEAGVTLEEPPVDDLLSLLKTYFSSNADPAAEELAKISESVRIPVDVVRKWFG
KMKNTAKSHKNSTSASTKKETEKSNREDVSNQDEDHRASSHSGSPSPSDSASLSLNNGDL
VIVKSEPEDPEDPEAADSQAEPLDLSIPKHMAAALVKKTSAPPVKQQDQPLNLTCLRKEQ
LGGRTIYVTAPQGGRPLNIVTAAQLPTLVAIAGQGGVSCLSAINTTTKRTILIPQLTYTY
ATTAGGAAGAKTVVLNGHKEKRLESRSDGVSPLEEQSDADSLMKKRRLEHGVYPCDLCSK
VFQKGSSLLRHKYEHTGKRPHECNVCKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSH
SGSYSQHMNHRYSYCKKEGPGSGSGPRRVQSDLGGAGPQSDSRTTTPPSQLDSDERESEE
EEDEDDEAMCMDDIRVVQVDDGECEIYEGNFDEEEGEEEEEEEEEEEEGEELDEETQRER
MEEEFVCDVVEVELGENHMEDMMMRMRMEMEEPVEEEEETADCDEDTDRSFREELDGAEP
LEEGEVREAK
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgcggaggagcagcgcg
acaaacttcaacaatggcttggaggccagttcggactctgacgacgaggacaagctgcac
atcgtggaggaggacagcctgcaagaaccggaggggagccatgacgccatcacagtgtta
cctcacaacggagtgaaggaggagtgtgtgtcggaggaggaggaagaggaggaagaggag
gtgaaggatgctctggtggaggagatcctccagcagggagacacagccgtcatctatcct
gaagcgccggaggacgagcagagtccagctgagaccggcggcgccgacgaaaacggaact
ccggactccttctcccagctgcacacctgcccctactgctcccgcggctacaaacgaaac
gcctcgctgaaggagcacatcaagtaccgccacgagaccagcgacgacaactacagctgc
tcgcattgcagctacaccttcacctaccgctcgcagctggagaggcacatgagtcaccac
agaggcagccgagagcagcggcacgtctcccagacgacgggcggaaccggaggaacagga
ggaaccggaggaaccggaggaacccgcaagttcaaatgtactgaatgttccaaagccttc
aagtacaaacatcacctgaaggagcacctacgcattcacagtggtgagaaaccgtacgag
tgctccaactgtaagaagcgtttctcccactcgggctcctacagctcccacatcagcagt
aagaagtgtgttggctccgccccccccaacggggtcacccgctcctccatcaagtcgccg
ccgccgaccccggcgagccgaccggtggtgatcgccccggcccggatgatcctcaaagag
aaggccgacagcaagccgctgcaggagcagctgcccgtcacgcagatcaagtccgaaccg
gtggaatacgagtgtaagccggcgatggcggcgcccgccacctccgccggcggtaacgga
ggggcggttcagccggccacggccccgcctcccacgctgcctcagggcgtggccgtggtc
gtccccacggtcggcctgatgtcgcccatcagcatcaacctcagcgacctgcagaacgtg
ctgaagctggcgatggacgggaacgtgctgcggcaggttctgggctcggccaacggcgtg
gtggcgggaaaaccgggcgtcgtggtgcagcagccgcagcagcagatcatcagcctgccg
gccttcgtggaccacgacggcaccaccaagatcatcgtcaactacagcatcagccccgcc
gccgccccgctggtcgtcaagagcgacccccctccccctcccgccgcccccacccccgcc
cccaccaggacaggtaaagccccgacccccgaggtgtccgacctcaccgtcgtcaagatg
gagccggagccggtacccgtctcggagacggagactcttaagactcgtcagatgccaaaa
gccagcagcaccagcacgtgtttactgtgcgacgactgtcccgaccacttggaggcgctg
cacctcctgcagcaccgcaaggccgccaacggggaggccgtggactcggccgctctggac
ccgtccttcgccgctctgctgagcgaagccggagtgacgctggaggagccgccggtggac
gacctcctctcgctcctcaagacttacttctcctccaacgccgaccccgccgccgaggag
ctggcgaagatctcggagtcggtccggatcccggtggacgtggtcaggaagtggttcggc
aagatgaagaatactgcaaaaagccacaaaaactcaacttcagcttccacaaagaaggag
acggagaagtccaaccgcgaggacgtgtcgaaccaggacgaagaccacagagcctcctcc
cactccggcagcccctccccctcagactccgcctccctcagcctcaacaacggggacctg
gtcattgtgaagagcgagcccgaggaccccgaggaccccgaggccgccgactcccaggcg
gagcccctggacctctccattcccaaacacatggcggcggcgttggtgaagaaaacaagc
gctcctcccgtcaagcagcaggaccagccgctgaacctcacctgtctgaggaaggagcag
ctgggggggcggaccatctacgtcaccgcgccgcagggcgggagacccctgaacatcgtc
accgctgctcagctgcccaccctggtggccatcgccgggcagggcggagtcagctgcctg
agcgccatcaacaccacaaccaagcgcaccatcctcatcccccagctcacctacacctat
gccacgacggccgggggcgccgccggagccaagaccgtggtgctcaacggacacaaggag
aagcgtttggagagccgctctgacggcgtttccccgctggaggagcagagcgacgccgac
tcgctgatgaagaagcggcggctggaacacggcgtgtacccgtgtgacctctgctcaaag
gtcttccagaagggcagctccctgctgcggcacaaatacgaacacacaggaaaacgtccc
cacgagtgcaacgtgtgcaagaaggcgttcaaacacaagcatcacctgatcgagcactcg
cggctgcactcgggggagaaaccgtaccagtgcgacaagtgcgggaagcgtttctcccac
tcgggctcgtactcgcagcacatgaaccaccgctactcctactgcaagaaggaggggccc
ggctccggctcggggccccgccgggtccagtcggacctcggcggggccggcccgcagtcg
gacagccgcaccacgactccgccctcccagctggactcggacgagagggagagcgaggag
gaggaagacgaggacgacgaggccatgtgcatggacgacatccgggtggtgcaggtggac
gacggagagtgtgagatctacgagggaaactttgacgaggaggagggagaggaggaggag
gaggaggaggaagaagaagaagaaggagaagagttagacgaagagactcagagggagagg
atggaggaggagtttgtttgtgatgtggtggaggtggagctgggggagaatcacatggag
gacatgatgatgaggatgaggatggagatggaggagcccgtggaggaggaggaagagaca
gcagactgtgacgaagacacggacagaagcttcagggaggagctggacggcgccgagccg
ctggaggagggggaggtgagggaggccaaatga
DBGET
integrated database retrieval system
