KEGG   Brachyistius frenatus (kelp perch): 138626891
Entry
138626891         CDS       T10614                                 
Symbol
lig1
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bfre  Brachyistius frenatus (kelp perch)
Pathway
bfre03030  DNA replication
bfre03410  Base excision repair
bfre03420  Nucleotide excision repair
bfre03430  Mismatch repair
Brite
Enzymes [BR:bfre01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     138626891 (lig1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     138626891 (lig1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     138626891 (lig1)
DNA replication proteins [BR:bfre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    138626891 (lig1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     138626891 (lig1)
DNA repair and recombination proteins [BR:bfre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     138626891 (lig1)
   NER (nucleotide excision repair)
    Other NER factors
     138626891 (lig1)
   MMR (mismatch excision repair)
    Other MMR factors
     138626891 (lig1)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N
Other DBs
NCBI-GeneID: 138626891
NCBI-ProteinID: XP_069564970
LinkDB
Position
Unknown
AA seq 971 aa
MQRSIASFFQPKNQNNEVRKKRIDEPVKKPLKSPLKVQNGVPEADSPVKKVSKRSRQILD
SDDDEAPAVKEPVGDREASGKTEKRDVVFKAVPTPLSPPPATPTPVTPATPITPVTPASS
SSPGTPSSISPSGIVKRTTARKMFPKRKLDDSRREEAEEGQQSKRPRVGTSAGSAGNNEE
LMEEEVKEETAEQAVTDSPVEEVEKKKKGEEDEEEKEKKKKKKEKEKKKKKVVVEKDTRD
KGENSKEQKEAKEQKDKQPARKTPISTFFAPRKAAMKKEEEKEEEKKEEKEKEEGGGRKT
TAERRSSEEEESKDSKRESTSGPTDYDPSRPNYHPEEHACWRRGQRVPYLAVARTFQKIE
EDSGRLRNIETLSNLLRSVLLLSPDDLLCCVYLCLNQLGPAYLGMELGVGETVLMKAVAQ
ATGRQLDKVKAETQERGDLGLVAESSRSNQRMMFQPASLTAGGVFRKLKEIANMSGNSAM
NKKIDIIKGLFVACRFSEARYIVRSLAGKLRIGLAEQSVLSALSQAVCLTPPGQAVMDAG
KGMNAESRRAWIEEKSLILKQTYCEMPNYDILVPVLLKEGIDQLPNHCKLTPGVPLRPML
AHPTKGVGEVMKRFDEAAFTCEYKYDGERAQIHILENGEVRIFSRNQEDNTSKYPDIISR
ISKVKTASVVSCVLDSEAVAWDREKKQIQPFQVLSTRKRKDVDASEIKVQVCVYAFDLLY
LNGESLVRQPLCRRRALLRESFSEVEGEFVFARFIDSDNTDAIADFLEQSVRDSCEGLMV
KTLEKDATYEIAKRSHNWLKLKKDYLEGVGDTMDLCVIGAYLGKGKRTGTYGGFLLACYD
EDNEEFQAVCKVCVCVCVCVCVCVCVCVCVCVCVCVCVCVCVCVSVCVCVCLCVCVCLSL
CVCVCVCVSVCVCVCVCLCVCVCVSVCVCVCLSLSLCVCVCVCVSLCVCLCVCVCVCVCH
HFIVQLEEVFI
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgcagcgcagcatcgcatctttctttcagcccaagaaccagaacaacgaggttcggaag
aaaagaatcgatgaacccgtgaaaaaacctctgaaaagccctctgaaggtgcagaacggc
gtcccggaggccgattctcccgtcaagaaggtttccaaacgcagccgtcagatcctggac
agcgacgatgacgaggcgccggcggtgaaggagcccgttggagacagagaggcttctggg
aaaacggagaagagggatgttgtgtttaaggccgtccccaccccactgtctcctccacca
gccaccccgacgcccgtcaccccagcgacgcccatcaccccggtgaccccggcctcctca
tcttcccccggcactcccagctccatctccccctccgggatcgtcaagcgtacgacagcg
aggaagatgttccccaagaggaagctggacgacagcaggagggaggaggctgaggagggg
cagcaaagcaagcgcccccgtgtggggaccagcgccggcagtgcaggaaacaacgaggag
ctcatggaggaggaggtgaaggaggagacggctgagcaggcagtgaccgacagcccagta
gaggaggtggagaagaagaagaaaggagaggaggatgaggaggagaaggagaagaagaag
aagaagaaggagaaggagaagaagaagaagaaagtggtggttgaaaaggacacgcgagac
aaaggagagaactcgaaggagcagaaggaagcgaaggagcagaaagataagcagccggcc
aggaaaactcccatcagcactttctttgctcccagaaaagctgccatgaagaaggaggag
gagaaggaggaggagaagaaggaagagaaggagaaggaggaggggggagggaggaagacg
actgccgagaggaggagctccgaggaggaggagagtaaagactccaaacgcgagtcgacg
tccggaccgacagactacgacccgtcccgacccaactaccacccagaggagcacgcctgc
tggaggcggggccagagggtgccgtacctggcggtggctcgcacctttcagaagatcgaa
gaggactccggcaggctgagaaacatcgagactctgtccaacctgctgcgctccgtgctg
ctgctgtctccagacgacctgctgtgctgtgtgtacctgtgtttgaaccagcttggcccc
gcctacctggggatggagctcggcgttggagagacggtgctgatgaaagccgttgctcaa
gcaaccgggcgacagctggacaaagtcaaagcggagacgcaggagagaggagatctgggc
ctcgtggccgagagttcccgtagcaaccagcgcatgatgtttcagccggccagtctgacc
gcagggggcgtgttcaggaagttaaaggaaatcgccaacatgagtggaaactcagccatg
aataagaaaatcgacatcatcaaaggcctctttgtggcatgccgcttttcagaggcccgc
tacatcgtcaggtctctggccgggaagctgaggatcggcctcgctgagcagagcgtcctg
tctgcgctgagccaggccgtctgcctcaccccacctggacaagctgtgatggacgcgggg
aaggggatgaatgctgagagcagacgggcctggatcgaagagaagagtctcatcctcaaa
cagacctactgcgagatgcccaactacgacatcctcgtcccggttctgctgaaggagggc
atcgaccagctacccaatcactgcaagctgactccaggtgtgccgctgagacccatgttg
gctcatcccaccaagggcgtcggcgaggtgatgaagaggtttgacgaggcggcgttcacc
tgcgagtacaaatacgacggggagcgtgcacagattcacatcctggaaaacggcgaagtt
cgaatattcagccgcaaccaggaggacaacaccagcaaatacccggacatcatctcccgc
atctccaaggtgaagacggcctcggtggtgtcctgcgtcctggactcggaggcggtggcc
tgggatcgggagaagaagcagattcagcccttccaggtcctcagcaccaggaagaggaag
gacgtggatgcctcagagatcaaagtccaagtgtgtgtgtacgccttcgacctcctgtac
ctgaacggtgagtccctggtacggcagcccttgtgtcggcgccgtgctctgctgagagaa
agcttctctgaggtggagggagagttcgtcttcgcccgattcatcgactccgacaacacg
gacgccatcgcagacttcctggagcagtctgtccgagactcctgtgaaggcctgatggtg
aagactctggagaaggatgcaacctatgaaatcgccaagcgctctcataattggctcaag
ctgaagaaggactacctggagggcgtgggcgacaccatggacctgtgtgtgatcggggcg
tacctggggaaagggaagaggacgggcacctacgggggattcctgctggcctgctacgac
gaggacaacgaggagttccaggctgtctgcaaggtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtg
tgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctgtctctg
tgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtg
tgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtctgtctctgtctctgtgtgtgtgtgtg
tgtgtgtgtgtgtctctctgtgtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtcac
cacttcatcgtacagttagaagaagtgttcatctga

DBGET integrated database retrieval system