Brachyistius frenatus (kelp perch): 138627336
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Entry
138627336 CDS
T10614
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
138627336 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfre04131
]
138627336 (rabgef1)
Membrane trafficking [BR:
bfre04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
138627336 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
138627336 (rabgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
RecG_N
Motif
Other DBs
NCBI-GeneID:
138627336
NCBI-ProteinID:
XP_069565698
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MSQRTERRGIHVDQSDLLCKKGCGYYGNAAWQGLCSKCWREEYQRVRQKQIQDDWALAEK
LQREEEAAYASSHGSQNQTQNQTQSTAPHQPPGLASLGPFSKFEEKKTNEKTRKVTTVKK
FFSPSSRTASKKETQEGKTPSPSISRHASFDTDQVSRDFVEYLKNLQKPGREIHKQCRVF
LVNMSSKKDLGADELSECVQDFYQNLADRLMSHFKVSSESVEQVMDQVEKYIMTRLYKSV
FCPETTDDEKKDLATQHRIRALHWVTIEMLCVSMDEEIPEVSENVVKAITDVIEMDSKRV
PRDKLGCITRCSKQIFSAIKITKNEPASADDFLPALIYIVLKANPPRLQSNIQYITRFCN
PSRLMTGEDGYYFTNLCCAAAFIEKLDAQSLNLSPEEFERYMSGQASPRFSGSEGDWPDA
GPGLGAAAANPVLAQLDRNLDVLSGLGGRQEALMEAAESLRADLASWPDKVQREVNDILE
KYPLEIQTRNVSAIDANNMDNDNLPPPLKPQVFAG
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcggacggagcgacggggcatacacgtggaccaatcggacctgctgtgcaaa
aagggatgcggttactatggcaacgcggcatggcagggcctgtgctccaagtgctggagg
gaggagtaccagcgggtgcggcagaaacagatccaggacgactgggccttggcagaaaag
ttgcaacgggaggaggaggcagcgtatgccagtagtcacggatcccagaaccagacccag
aaccagacccagtccacggcaccacatcagcccccgggactcgcctccctgggccctttc
tccaagttcgaggagaagaagaccaacgagaagacgcgtaaagttaccaccgttaagaag
ttcttcagcccttcgtctcgcacggcttccaagaaagaaacccaggagggcaagacgccc
agtccgtccatcagccggcacgccagcttcgataccgaccaggtgtccagagacttcgtg
gagtacttgaagaacctgcagaagcccggccgggagatccacaagcagtgccgagtcttc
ctcgtgaacatgtcgagcaagaaggacctcggtgctgacgagctgtcggagtgcgttcag
gatttctaccagaacctggcggaccgcttgatgagtcactttaaagtctcctcagagtct
gtggagcaggtgatggaccaggtggagaaatacatcatgactcgtctgtacaagagcgtt
ttctgcccggaaaccactgatgacgagaagaaggacttggccacacagcacaggatccgg
gcgttacactgggtgaccatcgagatgctgtgtgtgtccatggatgaagaaatccccgaa
gtctccgagaacgtagtcaaagcgataacagacgtcatcgagatggactcgaagagggtt
cctcgggacaagctgggctgcatcacgcgctgcagtaaacaaatcttcagcgccatcaag
atcaccaagaacgagccggcctccgccgacgacttcctgccggcgctcatctacatcgtg
ctgaaggccaaccctccgcggcttcagtccaacatccagtacatcacacggttctgcaac
ccgagccggctgatgaccggagaggacggctactacttcaccaacctgtgctgcgccgcc
gccttcatcgagaagctggacgctcagtctctcaatctttccccggaggagttcgagcgc
tacatgtcgggtcaggcgtcgccacgattcagcggctcggagggcgactggcccgacgcc
ggtccgggactcggcgccgccgccgccaacccggtcctcgctcagctcgaccgcaacctg
gacgtgctgtcgggcctcggcggccggcaggaggcgctgatggaggctgccgagagtctg
cgggccgacctggcgtcctggcccgacaaagtgcagcgagaggtgaacgacatcctggag
aaatatccgctggagatccagacccgcaacgtttctgccatcgacgccaacaacatggac
aacgacaacctgccgccgccactcaaaccgcaggtgttcgccgggtag
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