Brachyistius frenatus (kelp perch): 138627612
Help
Entry
138627612 CDS
T10614
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bfre01001
]
138627612 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
bfre04054
]
138627612 (ciita)
Enzymes [BR:
bfre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
138627612 (ciita)
Protein kinases [BR:
bfre01001
]
Serine/threonine kinases: Other
TAF1 family
138627612 (ciita)
Pattern recognition receptors [BR:
bfre04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
138627612 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
NPHP3_N
AAA_16
nSTAND3
AAA_22
AAA
TsaE
Motif
Other DBs
NCBI-GeneID:
138627612
NCBI-ProteinID:
XP_069566159
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MKFRAAWSLLRIGENTAGSSAVLSIIQGDPTDAKMLEVDQDPFISEFGDLPDDLLEYMMV
DYPDTNLLFDDSSLKNTDELGDVPIATKVPSPGDHQQEQNNKQTDKTKTRRKSKRVPQSQ
LWTNENPTAKRQRTTGQPKNNETQAEPAVVQGAHTGSWPSPTETVRGMSTPPPKILHVYH
SPSAHRIPIQFITIPDSPGYQVVHLSPPPPVIQLPLPNTAAAPTYILVPAASPPSRHRVP
PLSPTNGAVAPTHMSSSPSGSLTASKAMSPSCATPVSPSSEIMSLHKDSPLPQSPAVIDI
PQVVKDYIQEAKVHMSQTCQDMEPGLSLTSHYVEVQVCQREILRSGKTTSKCLDKELIIM
GDTDRQKTLLGPSQIFESSNGDKPKRYILLLGNAGMGKTTLIKKLCLDWSRDCIPQFDFV
FLLDGKDLTLTEPTYSLQTLLLNLSCSAPSCMDPDTVYAQILAAPKRVLIIFDGFDELQN
YETLLQAPEKDSITSLQKDSKAQTFTVRQLYFAILQRVLLPGCTLLLSTRPRGAATQLLR
RVDSLLEVCGFTSANVETYLSQYFTPPALRASALDFLKSSRYLHFLCCNPALCQMVCLVL
EQSKSSEVLPRTLTELCHQVLCLKLEKDSGGTCSYVAAQTQISETQTQTSNSSQVKRCHK
NNRTTSRAQVRTSSHTQRARRAKQQKKEEDKVGEEMTVGREGAKTENRELLLQLSSLAWE
RVKDKSSTLSKGQAITAKLKAFGLRTGLFLSHHLRKRPLESSGEKEEGRAEDKCEMGGEQ
KGERKENRHDDHVLLWANPFLKSYLAAVHLSLSRTVSERTFLQTLSFQLGPKGRPKPQRE
EMELTQRFVVGLLFHNRTTLQRLHSYTERVFRDVVVSKLAVVTKHLEGLSLGDLSPAQVL
ETCHYVYEASLTHDESSRDSASTRLMNRLAANLPESLTFHRVPLSLPHVFIVQNVLERGA
TEGRTFCLDLEDSGIQICGLRALVGLKNIKTYRACIADVITLWEQLQQSGDEELLKGAVS
KFKIHPLKATQVCHIEHLAKLVNIHVHKSLSDSSSQSDSILAEGVPAVRELHKLELELSP
EIGPRALPKLLDLLPVLQNLQHLDLENCKIGDKGAEKLANALISLCSLEILNLSQNCIED
QGVKKLTTTLKHLPKLHCLSLYSNGISDEGAESLAAILPQMTSLTDLDVTYNKLTDVGAQ
SLGASLRNCKKMKTLRMWNHFIPGGVFERLQQQDSRILCQ
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcgcgcggcttggagtttgctgcgcatcggggaaaatacagcaggaagttca
gctgtcctgagcatcatccagggagacccgacagatgccaaaatgctggaagtggaccag
gaccccttcatctctgaatttggagatttgccagatgatttattagaatacatgatggtt
gattaccctgatacaaatttgctctttgatgattcatcgttgaagaacacggatgaactc
ggtgacgttcccatagcaacaaaagtacccagccctggggaccaccagcaggaacagaac
aacaaacaaacagacaaaacaaaaaccaggaggaaaagtaagagagtccctcagtcacaa
ctatggactaatgagaaccccacagcaaaaaggcaaagaacaacaggtcaaccaaaaaac
aatgagacgcaggctgagccagctgttgttcaaggtgcccacacaggatcatggccaagt
ccaacagagactgtgagaggcatgtccaccccgccaccaaaaatccttcatgtctaccat
tccccttcagcacatcgcattcccattcagttcatcaccatcccggactctccaggatac
caggttgtccatctctctcctcctcctcctgttattcagctgccgctacccaacacagct
gctgcaccgacatacatactcgttcctgctgcctcaccaccctccagacaccgagtgcca
ccactctcaccaacgaacggtgcggtagcgccgacccacatgagttcatccccatcaggt
tctctcacagctagcaaagccatgtctccctcttgtgccacacccgtctcccccagtagt
gagatcatgtctcttcacaaggattcacctcttcctcagtctcctgctgttattgacatt
ccacaggttgtaaaggactacattcaggaagccaaagtccacatgagtcaaacctgccag
gatatggagccaggtctgagcttgacctctcattacgtggaagtacaagtgtgccagaga
gagattcttcgctctggaaaaaccacaagcaaatgcctggacaaggaactaatcatcatg
ggagatacagatcggcaaaaaaccttgctgggaccgagtcagatctttgaaagctcaaat
ggagacaagccgaaacgctacattttgctgcttggaaacgctggcatgggaaaaaccact
ctgatcaagaagctgtgccttgactggtccagagactgcatcccccagtttgactttgtc
ttcttattagacggcaaagacctcactttaacggagccgacctacagccttcagacgctg
cttctcaacctctcctgctctgccccgtcctgcatggacccggacacagtgtatgctcaa
atacttgcagcccccaaacgagtgctcatcatttttgatgggtttgacgagttgcagaac
tatgaaactctactccaggctccagaaaaagactccataacatcattgcagaaagacagt
aaggcacagaccttcacagtcaggcagttatactttgccatccttcagagggtccttctt
ccaggctgcactctgctactctccacccggcctagaggtgctgccacccagctactccgc
cgcgtggacagcctcctggaggtgtgtggctttacctcagcaaatgtagagacatatttg
tctcaatacttcactcctcctgctctcagagcatctgctttggactttttaaaaagtagc
agatatctacatttcctctgctgtaacccggcactgtgtcagatggtgtgcctggtttta
gaacagtccaaaagttcggaggtcctaccaagaactttgactgagctctgtcatcaagtg
ctttgtctaaaactggaaaaagacagtgggggcacatgctcatatgttgcagctcaaaca
caaatatctgaaacccagacacaaacctcaaatagttctcaagtgaagcggtgtcacaaa
aataatcggacaacgtccagagcacaggtacgcacttcatctcacacccaaagagcaagg
agagcaaaacaacagaagaaagaggaagacaaagtgggtgaggaaatgactgttggcagg
gaaggagctaaaacagagaacagggagttgctgttgcagctgagctctttggcctgggag
agggtcaaagacaagtcctctaccctgtccaaaggacaggccataactgccaaactcaag
gcgttcggcctcaggactggtctctttctctctcatcacctgaggaagaggccgttggaa
tcaagtggtgagaaggaggaaggaagagcagaagacaaatgtgagatgggaggagaacag
aaaggagagaggaaggaaaacagacatgatgaccacgtcctgttgtgggccaaccctttt
cttaagagttacctggcagcagtccatttgtctttgtcaaggactgtatcggaacgaact
tttctccagaccctctccttccagttaggtccaaagggtcgaccgaaacctcaaagggag
gagatggagctcactcagcgatttgttgtcggcctgctcttccacaacaggacaacactg
cagaggcttcattcatacacagagagagtcttcagagatgtggtcgtcagcaagctggct
gtggtaacaaaacatttggaaggtctttcccttggtgacctgagccctgcccaggtgctt
gagacatgccactatgtttatgaggcaagtttgacccatgatgagagtagcagagactct
gccagcacacgactgatgaatcgtctggcagcaaatcttcccgaatccctgacatttcac
agagttcctctcagcctgccacatgtgttcatcgtgcagaacgttctcgaacgaggtgca
accgaagggagaactttttgtttggatctggaggactctgggatacagatctgtggactc
agagctctggtgggcctcaagaacatcaagacatacagggcatgcatcgctgatgtcatc
accctctgggagcagctacagcagagtggtgatgaagagctcctgaaaggggcagtgtcc
aagttcaagatccaccctctgaaagcaacacaagtgtgtcacatagagcacctggcaaag
ctggtcaacatacatgtgcacaagagtctatcagacagttccagccaatcagattccatc
ctggcagagggagtaccagcagtcagagagctacacaagctggagcttgagctcagtcca
gagatcggtccccgggctcttcctaagctgttggatctccttccagtgctgcagaacttg
cagcacttggatctagagaattgtaagataggggacaaaggagcggagaaactggctaat
gcattgatctcactgtgttccctggagatacttaatctgtcacagaattgtatagaagac
cagggagtaaagaaactgacgaccacactgaagcacctgcccaaactgcactgtttaagt
ctctacagtaatgggatctctgacgaaggggcagagagtttagctgctatcctcccacaa
atgacatccctcactgacctggacgtgacgtataacaagctgacagatgttggagcacag
agcttgggagccagtctgagaaactgcaaaaagatgaagactttaaggatgtggaaccat
tttatcccaggcggagtttttgagagacttcagcagcaggacagtcggatcctttgccaa
tag
DBGET
integrated database retrieval system
