Brachyistius frenatus (kelp perch): 138627620
Help
Entry
138627620 CDS
T10614
Name
(RefSeq) protocadherin-1-like isoform X1
KO
K16498
protocadherin delta 1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138627620
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfre01009
]
138627620
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bfre04515
]
138627620
Protein phosphatases and associated proteins [BR:
bfre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138627620
Cell adhesion molecules [BR:
bfre04515
]
Cadherins
Protocadherins
138627620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
PDGLE
Motif
Other DBs
NCBI-GeneID:
138627620
NCBI-ProteinID:
XP_069566166
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MAALRRAVLAVVLLLASCGAAPSDILYRVPEEQPPNTLIGSLAADRGLPDTGHLYKLEVG
SPYLRVDGKTGDIYTTEIPIDRETLKDCRNVFEGDKCFLEFEVSITDMVKGIGSGPRLIE
GRIEVLDINDNTPQFSSPILTLSIPENTHIGALFSIPMATDKDSGSNGVAEYSLSTGPDA
DQLFTLQVAVDSDEKLPQLVVMGNLDREKKDSYDLNIRVVDGGRPPRASSALLRVTVTDQ
NDNAPKFERSHYEAELPENSPLGHSVLQVRANDADTGTNGEIDYSLHQASETVQRLLRID
RSTGIIYVKGMVDREEESFLKFFVVAKDRGPNSKSSKVLVTINVRDQNDNAPAIEIRGIG
LVTHQDGVANISEDMPIGKPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESANDRK
RKYFLQTTTLLDYERVKDYRIEIVAVDSGNPALSSSNSLRVQVTDVNDNTPIFSPALLEV
DFPEGNQPGDQVLYIVATDADSGTNAELVYSIVEPSATRLFEIDGNSGEVRVKNLLDREE
TERYEFRVAAADKGLPSKTGTATVVINVLDRNDNDPKFMLNGYSFSVIENMAPLNPVGVV
TVTDADKGENSQVRLFVEPDNGKFVIQNGTGTILSSISFDREKESTYTFRLKAMDAGDPP
RSSYVGVTINVLDENDNAPYVTKPANSSYTYLTPVTPPETRVEVVEAEDIDAGPNAELYY
AITGGNPYGLFQISPNSGEITLAQEFTGKHKGLHRLVVRVSDKGKPPRHTTALVHVFVNN
TKSNVSLIEALVGHSLYTPLDRDIAGDPNYALAQRSNILYGSLAGIAGVILVIVAVVVIR
HRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKPLEEDEEASLQKGL
KFNLITDNVNDSPRICLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQDL
PATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSNKQLPHRRVTFSTANQAQDLQDASQHS
YYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMT
GNCTHECTEFGHSDSCWMPGQLSPDRKVSKNAAQLSTFVPYQEMDGQEQLMANGSPKPLT
MEERGPGGGSKVANMRFMTPYSSAYPGGGDSSGKDCGLEEIPLSQAVEYHSAATPTGQTS
KREIYL
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgagacgggcggtcctggccgtcgtcctgctgctggcgtcgtgcggcgcg
gcgcccagcgacatcctgtatcgggttcctgaggagcagccgcccaacacgctgatcggc
agcctggcggcggaccggggtctgcccgacaccggccacctctacaagctggaggtgggc
tcgccgtacctgcgggtggacgggaagaccggagacatctacaccaccgagatccccatc
gaccgcgagacgctgaaagactgccgcaacgtgttcgagggcgacaagtgcttcctggag
ttcgaggtgtcgatcaccgacatggtgaagggcatcggatcggggccgcggctcatcgag
ggacgcatcgaggtgctcgacatcaacgacaacacgccgcagttctcctcgcccatcctc
accctgtccatccccgagaacacccacatcggcgccctcttctccatccccatggcgacc
gacaaggactccggctccaacggcgtggccgagtactcgctgagcaccgggcccgacgcc
gaccagctcttcaccctgcaggtcgccgtggactcggacgagaagctgccgcagctggtc
gtcatgggcaacctggaccgcgagaagaaggactcgtacgacctgaacatccgcgtggtg
gacggcgggaggccgccgcgggcgagcagcgctctgctgcgcgtcaccgtcaccgaccag
aacgacaacgcgcccaagttcgagaggagtcactacgaggcggagctgccggagaacagc
ccgctgggacactcggtgctgcaggtccgagccaacgacgccgacaccggcaccaacggc
gagatcgactacagcctccatcaggcttcggagaccgtccaaaggcttctgcgcatcgac
cgctctacgggcatcatctacgtcaaaggtatggtggaccgagaagaagaaagtttcctc
aagttctttgtggtggccaaagatcgggggcccaattccaagagttccaaagtcctggtg
acgatcaacgtcagggaccagaacgacaacgccccggccatcgagatccgcggtatcggc
ttggtgacgcaccaggacggtgtcgccaacatctccgaggacatgcccatcgggaaaccg
gtggcgctggtccaggtgtcggaccgcgacgagggggaaaatgccgtggtgacgtgcgtg
gtcgccggtgacgtcccgttccagctccgacccgcgagcgagtccgccaacgatcggaag
aggaagtacttccttcagacgacgacgctgctggattacgagcgcgttaaggattacagg
atagaaattgttgccgtggattctgggaacccggcgctgtccagctctaactccctcaga
gtccaggtgacggacgtgaacgacaacacgccgatcttttcccccgcgttgctcgaggtg
gacttccctgaaggcaaccagccgggcgaccaagtgctatacattgtggcgacggacgcg
gacagcggcaccaacgcggagctggtctacagcatcgtggagccctcggccaccaggctc
tttgaaatcgacggcaactccggggaggtccgcgtgaagaacctgctggatcgggaagag
acggagcgctacgagttccgcgtggcggcggcagacaagggcctcccgagtaaaaccggc
actgctacggtggtgataaatgttctggaccgcaatgacaatgaccccaagttcatgctg
aacggctacagcttctcagtcattgagaacatggctccgctcaatccggtcggcgtggtg
accgtcacggatgccgataagggtgagaattcccaagtgaggctctttgtggaaccggac
aacggcaagtttgtgatccagaacggcacgggaaccatcctgtccagcatctccttcgac
cgtgagaaggagagcacctacaccttccgcctgaaggccatggacgccggtgatccgcct
cgatcctcctacgtgggagtgaccatcaacgtcctggacgagaatgacaacgccccctac
gtcaccaaaccggccaactcctcctacacgtacctgacgcccgtcacaccaccggagacg
cgtgtggaggtggtggaggccgaggacattgacgccggacccaatgccgagctgtactac
gccatcacaggcggaaacccatacggcctattccagatctcacccaacagcggggagatc
actctggcgcaggaattcaccggcaaacacaaagggctccaccggctggtcgtgagagtc
agcgataaaggcaaacctcctcgccacaccaccgctctggtccacgtcttcgtcaacaac
accaagtccaacgtgtccctcattgaggcgctggtgggacacagcctctacacccctctg
gaccgggacattgccggagatcccaactacgccctcgctcagcgcagcaacatcctgtac
ggcagcctcgccggtatcgccggcgtgatcctggtcatcgtggccgtggtggtcatcaga
caccggctgcagaaggacaccaagagcggctaccaggccggcaagaaggaaagcaaggac
ctgtacgctcccaagcaggggcccaaaaatggcaaagggaaaaagagcaagaaggggaag
gctccgaaaccggccaagccgctggaggaggacgaggaggccagcctgcagaagggcctc
aagttcaacctcatcaccgataacgtcaacgacagccccagaatctgcctgcccctcaac
tacccgccgggaagccccgatctgggccgccactaccgctccaactcccccctcccgtcc
atccagctgcagccgcagtcgccctccgcctccaagaagcaccaggccgttcaggacctg
cccgccaccaacaccttcgtggggacgggcgacaacaactccacgggctccgaccaatat
tcggattacagctacaaggccaacccacccaaatacagcaacaaacagctgccccaccgc
cgagtgaccttctccacggccaatcaggcgcaggatctgcaggacgcgtcccagcacagc
tactacgacagcggcctggaggagtcggagacgccgagctccaagtcgtcgtcggggccg
cggatcgggccgctggcgctgccggaggaccactacgagcgcaccacgcccgacggcagc
atcggcgagatggagcacccggagaacgacctcaggcctcttcccgacgtggcgatgacc
ggtaactgcacccacgagtgcaccgagttcggccactccgactcctgctggatgcccggc
cagctttcccccgaccgcaaggtgtccaagaacgccgcccagctctccaccttcgtgcct
taccaggagatggacgggcaggagcagctgatggccaacggcagccccaagcccctgacg
atggaggagcgcgggccgggcggcggctccaaagtggccaacatgcggttcatgacgccc
tacagcagtgcctaccccgggggcggagactcgtccgggaaagactgtgggctggaggag
atcccgctgagccaggcggtggagtaccactccgccgccaccccgaccggccagacctcc
aagagggagatctacctgtga
DBGET
integrated database retrieval system
