Brachyistius frenatus (kelp perch): 138627737
Help
Entry
138627737 CDS
T10614
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bfre00535
]
138627737
Proteoglycans [BR:
bfre00535
]
Extracellular matrix (ECM) proteoglycans
Others
138627737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
NDNF
DUF4959
VWA_3
Motif
Other DBs
NCBI-GeneID:
138627737
NCBI-ProteinID:
XP_069566385
LinkDB
All DBs
Position
Unknown
AA seq
1857 aa
AA seq
DB search
MHFSVRPSLCLLGFLLVCVLPQPARGQVSSPRRFRAKVQGADKLHVSWKEPKGEFESYKV
VYSTRPGGEQKVVPVSKQEAKLLIEDFDPSKEYNFKISAVSGGRESKPLQAKHEAHRSAV
EAPQSQRRESGGAAEENNEISEAEDGFMCKTPAISDIVILVDGSWSIGRINFRLVRTFLE
NLVRAFSVEFDRTRIGLAQYSGDPRIEWHLNAHTTKQAVIDAVKNLPYKGGNTLTGLALT
FILENSFKPESGSRPGVPKIGILITDGKSQDDVIPPAQSLKDAGIELFAIGVKNADENEL
KAIASPPEQTHVYNVADFSVMSDIVEGLTKTVCDRVEQLDRQIKGGREPAPPPAAVAPPR
DLVTSEITARSFRVRWTHAPGQVEKYRVVYYPASGGQPDEKVVQGTENSVELNYLNSLTE
YQVAVFAVYRSSASEALRGSATTLALPMVNDLQLFDITHSTMRVRWKTAAGASGYMILYA
PLTEGDPADEKEVKVADSVNEVDLEGLTPATEYTVTVYAMYGEEASDPMTSQQTTLPLLP
ARNLVFSDVDHSSARLTWDAPSQKVKGYRVMFVKTKGVQTNEVDVGRVTTWLLRNLTSLT
EYTVGVFAIYDEGQADVVTDSFTTKTVPDPLDLKSSDISTQSFRVSWQHAASDVVLYRLT
WTSTDGGDGEEALVNGNINTYLIKGLSPSTEYEVLLAAIYGNEVESDELILVESTVERTT
TIATTTTTTAAPRHGVRNLRIDEETTFSLRVAWQPVDARNVRHYRLNYVSARGDRAEETR
TVPVGQSSLVLQPLLSDTEYKIAITPVYPEGDGPTAGQMGRTLPLSAPKNLRVSEEWYNR
FRISWDVPPSPTMGYRVVYQPLSAPGPALETFVGEDVNTMLIVNLLSGTDYSVKVIASYT
TGSSDALSGRAKTLYLGVTNLSTYQVRMTSLCSQWQPQRHASAYRVGIESLVGSQKQETK
LSGGTNRHCFNNLKPNMQYKISVFAQLQDGTEGPAVTATEKTLPIPTPAPTKPPTTTPPP
TVPPAKEVCKAAKADLVFLVDGSWSIGDENFLKIIRFLYSTTGALDGIGPDGTQVAIAQF
SDDARTEFKLNSYDDKERLLDAINKIAYKGGNTKTGRAIQHVKENIFTAEGGVRRGIPNV
LVVLTDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPSDRHVFFVDDLDA
FKKIEEKLVTFVCEAATATCPSVPMSGSTTPGFRMMELFGLVENRYSTVSGVSMVPGTFN
TFPCFHLHSDALIAQPTRYLHPEGLPSDYTITLLFRLLPDTPEEPFALWEILNKNNEPLV
GVILDNGGKTLTFFNNDYKGEFQTVTFEGTEIKKLFYGSFHKLHIAISKTSARVVIDCKM
VAEKTINAAGNITTDGLEVLGRMVRSRGNKDNSAPFQLQIFDIVCSTSWANRDKCCELPG
LRKEVDCPALPKACTCTQDSKGPPGPAGLPGGPGIRGARGDRGEPGPVGPTGPVGDTGVP
GAQGPPGPQGPSGRAIIGAPGAPGERGQKGEAGQQGTQGIPGRAGGQGREGPAGTRGLPG
KDGPPGRQGPPGTMGTPGAPGSPGTSGPPGKHGELGPPGLPGGKGDKGERGDLQSAASVQ
AIARQVCEQLIQSHMARYNSILNQAPSPPVSIRTVPGPPGEAGRQGNPGPQGEQGPPGRP
GFPGQNGQNGQPGERGQLGEKGEKGSPGVGVQGPRGPPGPPGAQGQGRTGSQGSSGRPGN
PGAPGRPGVPGPVGTAGPPGYCDQNSCVGYNVGEGEDLTDVGAVPAVQLPSNVFQNYGEV
EEDDPYRYYQPNYPAPRPVSPDDPALGDVHRSARSVEGRRRPSRLEEETERRSDGAN
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atgcacttctcagtccgaccgagtctctgcctgctgggcttcctcctcgtctgcgtgctc
cctcagcctgccagaggccaagtgtcgtcgccacggagatttcgtgccaaagtgcagggc
gccgacaagctgcacgtgtcgtggaaagaaccgaagggagagttcgaaagctacaaggtg
gtttactccacgcggccaggtggagagcagaaggtggttccggtatcgaagcaggaggcc
aagctgctcatcgaagacttcgacccgtcgaaggaatacaacttcaagatctccgcagtc
agcggcgggcgggagagcaaacctctgcaggccaaacacgaagctcatcgatcggccgtc
gaagcgccacagtcccagaggagagagagcggcggcgccgccgaggagaacaacgagatc
tccgaagccgaagatggatttatgtgcaaaactccggccatatccgacatcgtgatcctg
gtggacggctcctggagtatcggacgtatcaacttccggctggtcaggaccttcctggaa
aacctggtccgggctttctctgtggagttcgacaggaccaggatcggtttggcccagtac
agcggggacccgcggatcgagtggcatctgaacgctcacaccaccaagcaggccgtgatc
gatgcggtgaagaacctgccgtacaaaggagggaacacgctgacgggtctggctctgacc
ttcatcctggagaacagcttcaaaccagagtccggatccagacccggcgttcccaagatc
gggatcctcatcaccgacgggaagtcccaggatgatgtcataccccccgcccagagcctg
aaggatgctgggatagaactgttcgccatcggtgtgaagaacgccgacgagaacgagctg
aaggccatcgcctccccccccgagcagactcacgtctacaacgtggccgacttcagcgtg
atgagcgacatcgtggagggcctcaccaagacggtgtgcgaccgcgtggagcagctcgac
cggcagatcaaaggtggaagagaaccagccccgccccccgccgccgtggctccgccccgt
gaccttgtgacctcggagataacggcccgcagcttccgggtgaggtggacccacgcgccg
ggccaggtggagaagtaccgggtggtgtactaccccgccagcggagggcagcccgacgag
aaggtggtgcaggggacggagaacagcgtggagctcaactacctcaactccctgacggag
taccaggtggcggtgttcgccgtctaccggagctccgccagcgaggcgctccgaggcagc
gccaccacgctggccctgcccatggtgaatgacctgcagctgttcgacatcactcacagc
accatgagggtccgctggaagaccgccgccggggcttctgggtacatgatcctgtacgcc
ccgctgactgagggagaccccgccgatgagaaggaggtgaaggtggcggactcggtgaac
gaggtggacctcgaaggactgacgccggccaccgagtacacggtgacagtgtacgccatg
tacggggaggaggccagtgacccgatgacgagccagcagacaacgctgccgctgctcccg
gccaggaacctggtcttctcagacgtggaccacagctcggcccgcctcacctgggacgcc
ccctcccagaaggtcaaaggttaccgcgtcatgttcgtcaagaccaaaggagtccagacc
aatgaggtggacgttggccgcgtgacaacctggttgctaaggaacctgacgtccctgacg
gagtacaccgtcggcgttttcgccatctacgatgaaggacaagccgacgtcgtgacggac
agtttcaccacgaagaccgtgcccgaccctctggatctgaagagtagtgacatctccacc
caaagcttcagggtgtcatggcaacatgcggcgtccgacgttgtgctgtaccgcctcacc
tggacgtccaccgacggaggagacggcgaggaggctctggtgaacgggaacatcaacacg
tacctgataaaaggactgagtccctccacggagtacgaggtgctgctcgccgccatctac
gggaacgaggtggagagcgacgagctgatcctcgtcgagtccaccgttgaaagaacgacc
accatcgccacgacaaccaccaccacagcagctcctcggcacggcgtgaggaacctgagg
atcgacgaggagacgaccttcagcctgcgggtcgcctggcaacccgtcgacgccagaaac
gtccgacattaccggctgaactatgtcagcgcgaggggagaccgagccgaggagacgagg
acagttccggtcggtcagagcagtctggtcctgcagcctctgctctcagacacagagtac
aagatcgccatcacgcctgtttaccccgaaggagacggaccgacggcaggacagatggga
cgaacacttcctctttcagccccgaagaacctgcgtgtctcagaggagtggtacaaccgc
ttcaggatcagctgggacgtcccaccatcacccaccatggggtaccgggtcgtctaccag
cctctgtccgcacccggtccggctctggagaccttcgtcggggaggacgtgaacaccatg
ctgatcgtcaacctgctgagtggcaccgattacagcgtcaaggtcatcgcctcgtacacc
accgggtccagcgacgccctgtcggggagggccaagaccttgtacctcggggtgaccaac
ctcagcacgtatcaggtgcggatgacgagtctgtgcagccagtggcagcctcaacgccac
gccagcgcctaccgggtcggcatcgagtcgctggtcggaagtcagaagcaggagacgaag
ctgagcggaggaacaaacagacactgtttcaacaacctgaagcccaacatgcagtacaag
atcagcgtgttcgctcagctgcaggacgggacggaaggacctgcagtcaccgccacggag
aagacactacccatcccgaccccggcgcccaccaagccccccaccaccaccccacctccc
accgtcccccccgccaaggaagtctgtaaggcagccaaggccgacctcgtcttcctggtc
gatggctcctggagcatcggcgacgaaaacttcctgaagatcatccgtttcctgtacagc
accaccggagcgctggacgggatcggaccggacggcacgcaggtggccatcgcccagttc
agcgacgacgcccgaaccgagttcaagctgaactcgtacgacgacaaggagcgtctgctg
gacgccatcaacaagatcgcctacaagggaggaaacaccaagacgggtcgagccatacag
cacgtgaaggagaacatcttcacggcggagggcggagtcaggagggggatccccaacgtc
ctggtcgtcctgaccgatggacgatcccaggacgacgtcaacaaagtctccaaggagatg
cagatggaaggttacatcgtgttcgccatcggcttcgccgacgccgactacggcgagctg
gtgagcatcgccagcaaaccaagcgacagacacgtcttcttcgtggacgacctggacgcc
ttcaagaagatcgaggagaaactggtgacgttcgtttgcgaagccgccaccgccacttgt
ccatctgtaccgatgagcggcagcacaacgccaggtttccgtatgatggagctgtttggg
ctggtcgagaaccgctacagcaccgtctccggcgtttccatggtacccggcaccttcaac
actttcccctgtttccaccttcacagcgacgccctgatcgcgcagcccaccaggtacctc
caccccgaggggctgccctccgactacaccatcaccctgctgttcaggctgctgcccgac
acgcccgaggagcccttcgccctctgggagatcctcaacaagaacaatgagccgctggtg
ggagtcatcctggacaacggaggaaaaactctgaccttcttcaacaatgactacaaagga
gagtttcagacggtcaccttcgaagggacggaaatcaaaaagctcttctacggcagcttc
cataagcttcacattgcgatcagcaagacgagtgccagagtggtgatcgactgcaagatg
gtggctgagaaaaccatcaacgcggcgggaaacatcaccacggacggcctggaggttctg
ggcaggatggtccgctccagggggaacaaggacaactcggcgccgttccagctccagatc
tttgacatcgtctgcagcacctcgtgggccaacagagacaagtgctgcgaacttcctggt
ctgaggaaggaggtcgactgcccggccctgcccaaagcctgcacctgcacccaggacagc
aaaggccccccaggccctgctggactaccaggcggtccgggaatcagaggagcccgagga
gaccgcggagagcccggcccggtggggccgaccggtcccgtcggggacaccggtgtaccc
ggagctcagggacccccggggccacagggacccagcggtcgcgccatcatcggagccccg
ggcgctccgggcgagaggggccagaaaggagaggcgggacaacaaggaactcagggaatt
cctggtcgagccggaggtcaaggaagagaaggacctgcaggaaccagagggctgccaggg
aaggacggccccccgggcagacaggggcccccgggaactatggggaccccaggagccccc
ggatccccgggaacctccggccctccgggaaaacacggagaactgggaccaccgggtctt
cctggaggcaaaggagataaaggtgaacggggtgacctccagtcggcggcgtcggttcag
gccatcgccaggcaggtctgtgagcagctcatccaaagccacatggcgcgctacaactcc
atcctgaaccaggcgcccagtccaccggtgtccatccgcacagtgcccggacctcccgga
gaggccggccgacagggaaacccgggtccccagggagaacagggacccccgggaagacct
ggcttcccagggcagaacggacaaaacgggcaaccgggagaaagaggtcaactaggagag
aagggcgagaagggatctccgggtgttggtgtccaaggacccagaggacctccaggacct
cccggtgctcaaggacaaggccgaaccggcagccagggttcgtcggggcgacccggaaac
cccggagcccccggtcgacccggggtccccggacccgtcggcaccgcgggacctccgggt
tactgcgaccagaactcctgcgtgggctacaatgtcggagagggcgaggatctcactgac
gtcggcgctgtccccgcagtccaactgccgtccaacgtcttccagaactacggcgaggtg
gaggaggacgacccgtaccgctactaccagcccaactacccggcgccgcgccccgtgtcg
cccgacgaccccgcgctcggcgacgtgcaccgcagcgctcgcagcgtcgagggccgacgg
agaccaagtcggctcgaagaggagacggaacggaggagcgacggcgccaactaa
DBGET
integrated database retrieval system
