Brachyistius frenatus (kelp perch): 138627740
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Entry
138627740 CDS
T10614
Name
(RefSeq) tenascin-N-like isoform X1
KO
K06252
tenascin
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04510
Focal adhesion
bfre04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138627740
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138627740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bfre00536
]
138627740
Glycosaminoglycan binding proteins [BR:
bfre00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138627740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Big_5
Motif
Other DBs
NCBI-GeneID:
138627740
NCBI-ProteinID:
XP_069566389
LinkDB
All DBs
Position
Unknown
AA seq
1441 aa
AA seq
DB search
MPFTSVGNALPRVTTAALGPQVTPAPGRDVAGVDRELNPSAEVQVFDQQGGREDFGDSSA
SAIARTKPLIGKTRPTSPRKPGPFRFNATRVVPGGRKFVPGAYKKAPVVVMKHSTTPQKP
KPGASAVGDSVRDQILEALSPERREDKIPDSPTNRRTNEQPDVGLADRGNDTDPVSPEPT
GTARSQEKKCMNKVKVTHFRLPPKDRGCRGDGTGVAGNTLSGETDLDYSPDPLHKLLTDT
FDSLNITTFSVHLSKPADVSDDADRVTMQILRGLKPLGSSSSSSQPSSESSSSRSSDAPS
SLAPSSSVSSTAAPSSSLGSLISSPSSSSPSSSSPSSSANSDSLGSDRLEGAASPEDQKP
PPSGEGGASLLHQAPPKRGFVHRPHANFPSFQNKTRLSFRVAPRRNFVPRKETEAERLSM
SELSFSSASEESSSGEVNAPVKDTSRDKDGTATPASSGVGLNPKKTLTERGRLPVRRLPP
EGGYQRRPFLNRGPFQNRTRPNSKSFTRPSQPLNPERQSQKEQAFSTELPATSPPSLPPA
ETHVGPSNTGTVREENEPSSGATEIDQTLRGRGGPSLHRPNTKVAYFRRPQHYSQNKTRT
NLRNSQNPLRGLARKPFQTKKLNGGGGVTVGSQTSQLVKDSTLENQSGEQDAPWPTQGVQ
TRQSGEQETADLTEKDGHDTTVRAQTDELGKRDDALNLKEETSNTDSVIHKERIDVGGNT
GATLQGRPTLKRTSSDRRASRPVTLPKRPPTRTITAQHDAVTGIRTRDDHKTNHTAKTGE
TGTAASDVSSKVTREPLDFVGVTNRTSDGFTLTWDAPEGKYKNFVVTRKEAGKDEHPKLK
ERIEEPEEEGSDDEDDSDADERTRQPTEESQRGTPEDDNRVPKSFTPKIQSGMTTKPTES
DKTFKKVLPGSARSFQFEDLIPQTDYTLTLLGKAPGLLSGLHKLVISTGPEPPSDIVFSK
VTENSLTVSWTKPKSPVSGFKVTYTHVDDGEPVSVSVDSADSSLGLSQLSPGSSYEVSII
STFGLDESDPIKDLVMTLPDPPTDLRTLNVTDTSALLLWRPALAAVDKYAIVYSAGSGSE
LRVTVSGNAAEQQLSGLEGSTTYTVTIVSQLGSAESSPATTSFTTTSGSGRGGEAPRDLL
ARDVTPRTVLLSWKPPSQPAGRYRLTYQTESQEMKEVIVDATVTQYNVTKLHPGSVYTAR
LQAETGGQYTSAVSTEFTTGTLRFPFPTDCSQELLNGIRTSGEAEIFPQGKLGTPMMVYC
DMETDGGGWTVFQRRKDGSVDFFRGWKDYSKGFGDLSGEFWLGLESIHNLTAMTNMNLRV
DLRDGGESAFAQYSTFAVAKRNYKLSVGGYSGTAGDSLSYHNNRIFSTKDRDPQPFITRC
ALSYRGGWWYKNCHEANLNGLFGIDVKHQGLIWTSWKGKEISISFTEMKMRPAAFRPPAR
G
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgccattcacatctgtaggaaacgcgttaccgagggtcacgacggcggctctcggcccg
caggtcacgccggcacccggtcgagatgtcgccggcgtggaccgagagttgaacccatca
gctgaggtgcaggtgttcgaccagcagggggggagggaggattttggcgactcctcagcg
tctgcgatcgccagaacgaaacctctaatcggcaagacgaggcccacgtcgcccaggaag
ccgggcccattccgtttcaatgcaaccagagtcgtgcccggagggagaaagtttgtccct
ggagcctataaaaaagctccagtcgtagtgatgaagcactcaacaacaccccaaaaacct
aaaccaggcgcatccgccgtcggagactccgtcagagaccagattttagaggcattgagc
cccgagaggagggaggacaaaattccggactcgccaacaaacaggcggacaaatgagcag
ccggatgtcggcttggcagaccgcgggaacgacacagatccggtgtctccggagccaact
gggacagctcggagtcaagagaagaaatgtatgaacaaagtcaaagtgacacacttcaga
ttgcccccaaaggacagagggtgccgaggggatgggacgggggtcgctgggaacacacta
tccggggagacggacctcgactactcaccggatcctctccataaactcctgacggacacc
tttgacagtttgaatatcacgacgttttccgttcacctgtctaaaccggcggacgtctcg
gacgacgccgacagagtgacgatgcagattctgagagggctgaagccgctgggttcgtcc
tcatcatcctcgcaaccgtcatcggagtcatcatcctcgcgctcgtcagacgcaccatca
tctttggcgccgtcttcgtcggtttcatcaacagcagcgccgtcgtcctcactagggtct
ttgatttcatcaccatcgtcttcctcaccatcgtcatcctccccttccagctcggctaac
tcagattcacttggaagtgacagactagaaggcgctgcgtcacctgaagaccaaaaacca
ccgccctcaggagaaggcggtgcatctcttctccaccaagcacctccaaaacgtggattt
gtacatcgtccacatgcaaactttccatcgtttcagaacaaaacccgtttgagtttcaga
gtcgctcctcgtcggaacttcgtccccagaaaagagacggaggccgaacgtctgtccatg
agtgaattatcattttcatctgcttcggaagaatcatcttccggtgaggtgaatgcaccg
gtgaaggatacgagtcgggacaaagatgggacagctacacctgcgtcctctggtgtagga
ctaaacccaaagaagacgttgacggaaagaggacgactcccagttcgccgtcttcctcca
gagggaggataccagcgtcggccgtttttaaacagggggccctttcagaaccgaacgcgc
ccaaattcaaagtcctttactcgtccctcccaacctttaaatcctgaaagacagtcacag
aaagagcaggcgttttccaccgagctgccagccacttcacctccgtctcttcctccggcc
gaaacccacgtcggtccatctaatacggggacagtaagagaggagaacgaaccctcgagc
ggggccactgagattgatcagactctcaggggtcgtggagggccatccctccatcgccca
aacaccaaagttgcctacttccgtcgcccacaacactattcgcaaaataaaacgcgcaca
aacctgagaaactctcaaaatccacttagaggtcttgcacgcaagcctttccaaacaaaa
aagctaaatggaggcggcggggttactgttggaagtcaaactagccaactggtaaaggat
agtacccttgaaaaccaatcaggagagcaggacgccccctggccgacccaaggagtccaa
acgagacaatcgggagagcaagaaactgcagatttaaccgagaaagatggccacgacact
actgttagagctcagactgatgagttaggaaagagagacgacgctctgaacctaaaagaa
gaaactagcaatacagattctgtcatccacaaagagagaatcgacgttggcggaaatacc
ggcgcgacactacaaggtagaccgaccctcaaacgaacctcctctgaccgaagagcgtca
agaccagtcacacttccaaagagaccgccaacaagaacgattacagcgcagcacgacgcc
gtcaccgggatccgaacgagagacgaccacaaaacaaatcacaccgcaaagaccggagag
acgggaactgctgcatcagacgtttcttctaaagtcacaagggaacctctggactttgtg
ggagtgacaaaccggacctctgacggatttacgctcacgtgggacgcaccggaagggaag
tacaaaaactttgtcgtgacgaggaaagaagctggaaaagatgagcatccgaagctgaag
gaaagaatagaggaaccggaagaagaaggctcggacgatgaggatgacagcgatgcggac
gaacgaacgcgtcaacccaccgaagaatcccaacgtggaactcctgaggacgataacagg
gtaccgaaaagtttcactccaaagattcaaagcggcatgacgaccaagccaacagaaagc
gacaaaaccttcaaaaaagtgcttcccggttcagctcgctccttccagtttgaggatctg
atcccgcagaccgactacaccttgaccttactcggaaaggctcccggccttctgtccggg
ctgcacaagcttgtcatcagtacaggccccgagcctccgtccgacatagtcttcagcaag
gtgacggaaaactctctgacggtgtcgtggaccaaaccaaagagtcccgtcagtggtttc
aaagtgacgtacactcacgtagacgacggcgaaccggtgtcggtgtccgtggactcggcg
gactcctccctcggcctgtcccagctctcgcccggttcttcttacgaggtcagcatcatt
tccaccttcggactggacgagagcgacccaatcaaagacttggtcatgacactccctgac
ccaccgacggacctgcggacccttaacgtcaccgacacctcggccttgttactgtggcgt
ccagcgttggccgccgtcgataagtacgccatcgtctacagcgcgggttcaggttcagag
ttgagggtcacggtgtctggaaacgcagccgagcagcagctcagcggcctggaaggatcc
accacctacaccgtcaccatagtgagccagctgggcagcgcagagagctcaccggcaacc
accagcttcaccaccaccagcggctctgggagaggcggggaggcgccgcgtgaccttctg
gcccgagacgtgacccctcgcaccgtcttgttgtcgtggaaaccgccgtcacagcccgcg
ggtcgatacagattgacctatcagacggaaagtcaagaaatgaaggaagtgattgtggac
gccacggtaacgcagtacaacgtgaccaaacttcatcccggctccgtgtacacggcgcgg
ctgcaggccgaaacaggaggacagtacacgtcggccgtctccaccgagttcaccaccggc
accctgcggttccccttccccaccgactgctctcaggagctgctgaacggcatccggacg
tccggcgaggcggagatcttccctcaggggaaactggggacgccgatgatggtttactgc
gacatggagacggacggcggcggctggacggtcttccagaggaggaaggacggctcggtg
gatttcttccggggctggaaagactacagtaaaggattcggcgatctgagcggggagttc
tggctcggcctcgagagcatccacaacctgacggcgatgaccaacatgaacctgcgcgtc
gacctgcgggacggaggcgagtcggcgttcgctcagtattccacgtttgcggtggcgaag
aggaactacaagctgagcgtgggcggatacagcggcaccgcaggcgactctctcagttac
cacaacaaccgcatcttctccaccaaagaccgcgacccgcagcccttcatcacccgctgc
gccctctcctatcgaggcggctggtggtacaagaactgccacgaggccaacctcaacggg
ctcttcggcatcgacgtcaaacaccagggtctgatctggacctcctggaaaggaaaagag
atctccatctcgttcactgagatgaagatgagaccggcagccttcaggcctccagccaga
ggatga
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