Brachyistius frenatus (kelp perch): 138628035
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Entry
138628035 CDS
T10614
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04142
Lysosome
bfre04144
Endocytosis
bfre05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138628035
04142 Lysosome
138628035
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
138628035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfre04131
]
138628035
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfre04147
]
138628035
Membrane trafficking [BR:
bfre04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
138628035
Exosome [BR:
bfre04147
]
Exosomal proteins
Proteins found in most exosomes
138628035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
138628035
NCBI-ProteinID:
XP_069566911
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKNPELWASVL
LETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDDKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN
HPADAWKEGQFKDIVTKVANVELYYKAVHFYLEFKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYAAVRTSIDAYDNFDNISLAQGLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLNE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDKL
EASESLRKQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQAYGYSYTAAPGYAPPPQPSF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactacctatccgcttccaggagcacctgcagctccagaacctggggatc
aacccggccaacatcgggttcagcaccctgaccatggagtcggacaagttcatctgtatc
agggagaaagtgggcgagcaggcccaggtggtcatcatcgacatggctgaccccaacaac
cccatccgccgccccatctcggccgacagcgccatcatgaaccccgccagcaaagttatt
gccctcaaagcggcaaagaccctgcagatctttaacattgagatgaagagcaagatgaag
gctcacacgatgacagatgatgtgaccttctggaagtggatctccctcaacacggttgcc
ctggtcacagacaacgcagtctaccattggagcatggagggtgactctcaaccaatcaaa
gtctttgaccgtcactccagcctggcaggctgtcagatcatcaactaccgcactgatgcc
aaacagaagtggctgctgctcatcggcatctcggcacagcaaaaccgtgttgtcggagcc
atgcagttgtactcggtggacaggaaggtgtctcagcctattgaggggcatgccgctggc
tttgcacagttcaagatggagggcaacactgaagagtcaactctgttctgcttcgctgtg
cgaggacaagcaggaggaaaactgcatatcattgaagtggggactccaccaactggaaac
cagccatttccaaagaaagctgtggatgttttctttcctccagaagcccagaatgacttc
cctgttgccatgcagatcagttccaagcaagatgtagtatttctcatcaccaaatacggc
tacatccacctgtacgacctggagaccggaacttgtatctacatgaacaggatcagcggg
gagaccatttttgtgacggccccacatgaacctactgctggtattattggagtcaacagg
aaaggacaggtgttgtctgtgtgcgtggaggaggaaaacatcatcccctacatcaccaat
gtgctccagaacccagacctggctctccgcatggctgtacgcaacaacctcgcaggtgct
gaggagctgtttgctcgcaagttcaacaccctcttcgcagcaggaaattactcggaagct
gccaaggtggcggccaacgcgcccaagggcatcctgcggaccccagacaccattcggagg
ttccaaagtgttccagcccagccaggccagacatctcctttgctccagtactttggcatc
ttgctggaccaaggccagcttaataagtttgagtctctggagctgtgcaggcctgtcctt
cagcagggccgcaagcagctgcttgagaaatggctaaaagaggacaagctggaatgttct
gaggagctcggagacttggtgaagtccgtggacccgactcttgccctcagtgtctacctc
agagccaacgtccccaataaggtcattcagtgttttgcagagaccggccagttccagaag
attgtcctttatgccaagaaggtgggctacactccagactggatctttctgctaaggaac
gtaatgcggatcagtccagaacagggccttcagttctcccagatgctggttcaggatgaa
gagccacttgctgacattacacagattgttgatgtgttcatggagtacaacctgatccag
cagtgcacatccttcctactagatgccctgaagaacaacagacccatggaaggaccgctg
cagacacgcctgctggaaatgaatttggttcatgcaccacaggttgcagatgccatcctg
ggcaatcagatgttcacccactatgatcgcgctcatgtggcgcagctgtgtgagaaggcc
ggtctcctgcagagggcgctggagcattatactgacctgtatgacattaaacgggctgtg
gtgcacacacatctcctcaacccagagtggttggtgaatttcttcggctccctctctgtg
gaggactctctggagtgtctgagggccatgttgtctgccaacatccgtcagaacctgcag
atctgtgtgcaggtcgcttccaagtaccatgaacagctcagtactcagtccctcaccgaa
ctgtttgagtcattcaagagcttcgagggtttgttctacttcttgggttccattgtgaac
ttcagccaggatccagaggtccacttcaaatacatccaggccgcctgcaaaacaggccaa
atcaaagaggtggagagaatctgcagagaaagtaattgctacgaccccgaacgtgtgaag
aacttcctcaaggaagccaagctcactgaccagctgcctttaatcattgtgtgtgaccgc
tttgattttgtccacgatctggtcctctacctgtaccgcaacagcctgcagaaatacatt
gagatctacgtgcagaaggtgaaccccagccgtctgcccgtagtcattggaggattattg
gatgtggactgtgctgaggatgtgattaagaacctgatcttggtggtgagaggacagttc
tccacagatgaactggttgctgaagtggagaaaagaaatcgactgaagctgctgctgcct
tggttggaggctcgtattcatgagggatgtgaggaaccggcaacccacaacgctctggcc
aagatctacatcgacagcaacaacaaccccgagcgcttcttgagggagaacccgttctat
gacagccgtgtggtgggcaagtactgcgaaaagagagacccccatctggcctgtgtggcg
tatgaaagaggacaatgtgaccaggaactcatcaatgtgtgcaatgagaactccctgttc
aagagtctgtcccgttaccttgtacgtcgcaagaaccctgagctgtgggcgagtgtgctg
ctggagaccaacaactacaggcgacctctcattgaccaggttgtccagacagccttatca
gagacccaggatccagaggaggtgtctgttacagtcaaggcctttatgaccgccgacctt
cccaatgagctcattgagcttctggaaaaaattgtgctggataattctgtcttcagcgag
cacagaaacctccagaatctgctcattctgacagccattaaagctgatcggacacgtgtg
atggagtacattaaccgcctggacaactacgatgctccggacattgccaacatcgccatc
agcaatgagctgtttgaggaggcttttgctatttttagaaaatttgatgtcaacacctct
gctgtgcaggttctgattgaacacattggtaacctggacagagcttatgaatttgctgag
cgctgcaatgagcccccagtttggagtcagctggcaaaggcccagcttcagaaaggtctg
gtcaaagaagccattgactcttacatcaaagctgatgacccctctgcttacatggaggtg
ggacaagctgcagctcaaagcggaaattgggaggacctggtgaagttcctgcagatggcc
cgtaagaaggcccgcgagtcatacgttgaaacggagttgatctttgccctggccaagacc
aaccgcctggctgagctcgaggagttcatcaacggacccaataatgctcacattcagcag
gtgggcgatcgttgctacgacgacaagatgtacgatgcagccaaactgctttacaacaac
gtgtccaactttggccgcttggcctccactctggtgcacctgggagaatatcaggctgct
gtggatggagcccgcaaggccaacagcacccgcacctggaaggaggtgtgttttgcttgt
gtcgatggaaaggagttccgtctggcccaaatgtgtggcctgcatattgtggtccacgct
gatgaactggaggaactcatcaactactaccaggaccgtggttacttcgaggagctgatc
actatgctggaggccgccctggggctggagcgcgctcacatgggtatgttcactgagctg
gccatcctctactccaaattcaaaccccagaagatgagggaacacctggagctcttctgg
tcccgcgtcaacattccaaaggttctgagggcagccgaacaggcccacctctggggcgag
ctcgtgttcctttatgacaagtacgaggaatacgacaacgccatcatcaccatgatgaac
caccctgctgacgcctggaaggagggccagttcaaagacattgttaccaaggtggccaat
gtggagctgtactacaaggccgtccacttttatctggagttcaaaccgttgttactgaac
gacctgctcattgtcctctctccaagactggaccacacacgtgctgtcaacttcttcagc
aaggtgaagcagctgcctctggttaaaccttatctgaggtctgtccagaatcacaacaac
aagtcagtgaacgaggcactgaacaacctcttcatcatcgaggaagactatgcggcggtg
cgtacatccatcgacgcttacgacaactttgacaacatctcactggcccagggcctggag
aagcatgagctgattgaatttaggaggattgccgcctaccttttcaagggcaacaaccgc
tggaaacagagtgtggagctctgcaagaaggacaagctctacaaggatgccatgcagtat
gcgtcagagtccaaagacacggagctggcggaggagctcctggcttggttcctgaacgaa
gacaagaaggagtgttttgccgcctgccttttcacctgctacgacctgctgcggcccgac
gtggtgctggagaccgcctggcgacacaacatcatggacttctccatgccgtacttcatc
caggtcatgagggagtatctctctaaggttgatgcgataaaggaaaaggtggacaaactc
gaggcctccgagtccctgaggaaacaggaggagcaggccaccgagtcccaacccatcgtt
tacggcaccccccagctcatgctcacagcagggcccaacgtggccgtgcccccccagcag
gcctacggctacagctacacagcagcgcccggctacgccccgccgccgcagcccagcttc
ggttacggcatgtga
DBGET
integrated database retrieval system
