Brachyistius frenatus (kelp perch): 138628328
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Entry
138628328 CDS
T10614
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfre03036
]
138628328 (chd5)
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138628328 (chd5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
PHD_2
DEAD
Motif
Other DBs
NCBI-GeneID:
138628328
NCBI-ProteinID:
XP_069567412
LinkDB
All DBs
Position
Unknown
AA seq
2002 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDMPDEDDEGERNNVPLAPLDSFFSDDDSVKQQKKKKPKKMK
EGKMPKVKKRKKEGGIPARVDSDLEETSEVEEEELERPEIGSESETSTYGPTKKKKKKPK
EKKEKKPRKKKRDEEEDDDDDDDGSMKEPKSSGQLMHEWGLEDVQYGFTEDDYKTITNYK
AFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTV
AQPTSVCSSQLSSPLGPIKKAKTKEGKGPGVRKRSKSVKEVKKKPKPKKTKSKSGQSGKK
KKASSSEEDFLEESDFDDISIHSASVLSDTSGAATKKKARRGRKKRKKEDGDGYETDHQD
YCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEEEEE
EAPGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPL
KGKVQRILHWTWGEPPLPAEPPAGPDGKPTDPLTNPPLKGHPEREFFVKWAGLSYWHCSW
VSELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRKSKDPQYAVMEERFYRY
GIKPEWMVIHRIVNHSFDKDGDVHYLIKWRDLPYDQCTWEVDDFDVPEYDSHKASYWDHR
EQILGEDQRPLVVRKGKKLKDDHPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQL
EGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWE
REFEMWAPDFYVLTYTGDKDSRAIIRENEFTFEDNAVKSGRKVFRMKKDTPIKFHVLLTS
YELITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEE
LFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTE
LIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVE
APVLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGY
KYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPH
NDIQAFSRAHRIGQNRKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMS
KQELDDILKFGTEELFKDEMEAARAMGDNKDGEEGNVIHYDDDAISKLLDRSQDATEDTE
IQNMNEYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLAR
NLGKGKRIRKQVNYNDTTQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRHSRRQ
LKNEKDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGK
SEREFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEH
VNGKLSSPDLIPIGLELKKLTESVSSDPNTPVPASPVATQPGTPVPPEKAESFLGTAEDK
ETTEHDSKKLSEQEASGAETASAPEKAADSEETKASSEEKTGDERNRTESPSTKTEPSAN
SKESAFKQAELPSSHTSPKMEPCKETERPSEKGDTDYPLAKTEDKENKPDDVKSEDALEG
RLNGDKDTLDEMDEGRKEDKNGFKAKFMFNIADGGFTELHTLWQTEERAALSSGKMHDIW
HRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEIHKGNYLEMKNKFLARRFKLL
EQALVIEEQLRRAAYLNMTQDPSHPAMALNTRFTEVECLAESHQHLSKESLAGNKPANAV
LHKVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGSEPPPQQPF
SQSAFGCSQMYSSGFGGAFRGPGGQPMVNYSQMPLGPYVSVSTNGPPPPTSHLDKKSLDS
LRDVATPDLKSGKPSDVICIED
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaagacgagggacaagacgacatggattttgaagacgat
atgccagacgaggatgacgaaggtgagcgcaacaatgttcccctcgcgcccctcgacagc
ttcttctccgacgacgactccgtcaaacagcagaagaagaagaagcccaaaaagatgaaa
gaggggaaaatgcccaaagttaagaagaggaaaaaagagggaggaatcccggcccgagtg
gacagcgacctggaggagacgtcggaggtggaggaggaggaactggagcgcccagagatc
ggctctgagagcgagaccagcacctacggtcccaccaagaagaagaagaagaaacccaag
gagaagaaagagaaaaagccccggaagaagaagagagatgaggaagaggatgacgatgac
gatgacgacggcagcatgaaagaacccaaatcgtccggccagttgatgcacgaatggggt
ctggaggacgttcagtatggcttcaccgaagacgactataaaaccatcaccaactacaag
gctttcagccagttcctcaggccgctcattgccaagaagaacccgaagattcccatgtca
aagatgatgacagtgttgggggccaagtggcgagagttcagcgccaacaacccgttcaaa
ggcgcatctgccaccgctgtggccgccgctgtggctgctgccgtggaaacggttaccgtg
gcacagccgacgtctgtctgcagcagccagctgagctctccgctcgggccaatcaaaaaa
gccaaaaccaaagagggaaaaggaccaggagtgaggaagagaagcaagtctgtgaaagaa
gtgaagaagaaacccaagccgaagaagaccaaatcaaagtcgggccaaagtgggaagaag
aagaaagcatcctcgagcgaggaggacttcctggaggagtccgactttgatgacatcagc
atccacagtgcctctgtgctttctgatacctcgggggccgccaccaagaaaaaggcgcga
cgtgggcgtaaaaaaaggaaaaaggaggacggtgacggctatgagacggaccaccaggac
tactgtgaggtttgccagcagggtggagagatcatcctgtgtgacacctgtcccagggcc
taccacctggtctgtctggaccccgagctggagaaggcccctgaggggaagtggagctgt
ccacactgtgagaaggagggaatccagtgggaggccaaggatgaggaggaggaggaggag
gaggccccaggcgaggaagaggacgaccacatggagttctgcagagtgtgtaaggacgga
ggggagcttctgtgttgtgacacctgcccgtcgtcctaccacatccactgcctcaacccg
cctcttcccgagataccgaacggcgagtggttgtgtcctcgctgcatgtgccctcctctc
aaaggtaaagtacaaagaattctgcactggacgtggggagaaccgccgttgccggctgaa
ccgcctgcaggtcctgacggtaagccaactgatccgctgaccaaccccccgctgaagggc
cacccagagagggagttctttgtaaagtgggccggactatcgtactggcactgctcctgg
gtcagcgaactgcagttggagctgtaccacacggttatgtatcgcaactaccagcgtaag
aacgacatggacgagcctccgccgtacgactacggctccggagaggaggagctcaacagc
gagaagaggaagagcaaagacccccagtatgctgtgatggaggagcgcttctaccgctat
ggcatcaaaccagagtggatggtgatccaccggatagtcaaccacagtttcgataaggac
ggtgacgtgcactacctgatcaagtggagagacctgccctacgaccagtgcacctgggag
gtggatgactttgacgtccccgagtacgacagtcacaaagcttcttactgggaccacaga
gagcaaattttaggggaggatcaacgcccccttgtggtgaggaaaggaaagaaactcaaa
gacgaccatccaaagagggaggtccctcctgatgctcccatcattgatccgaccatcaag
tttgagcaccagccgtggtacatcaacgccaccggggggacgctgcacccgtaccagctg
gaaggcctgaactggctgaggttctcctgggctcagggcaccgacaccatcctggccgat
gaaatgggcctgggcaagacggtgcagacgatagtgtttctctactctctgtataaggag
ggtcactcgaaggggcctttcttggtgagtgcccccctctccaccatcatcaactgggag
agagagtttgagatgtgggctccggatttctacgtgttgacgtacaccggggacaaagac
agcagggcgatcatcagggagaacgagttcaccttcgaagacaacgcagtgaaatcagga
cgcaaggtgttccgtatgaagaaagacacgcccatcaagttccacgtgctgctgacgtcg
tatgagctgatcacgatagatcaagccatcctgggctccatcacctgggcctgtctggtg
gtggacgaagcccacagactgaagaacaaccaatcaaagtttttcagaattctcaacggg
tataagatctactacaagctgctgctcactgggactcctcttcagaacaacctggaggag
ctgttccacctgcttaacttcctcaccccagagcgcttcaacaacctggaaggctttctg
gaggagtttgccgatatctctaaagaggaccagatcaagaaactgcacgacctgctcgga
cctcacatgctcaggaggctgaaagctgacgtcttcaagaacatgcctgcaaagacggag
ctgatcgtcagagtggagctcagtccaatgcagaagaaatattacaagtttatcttgacg
cgaaatttcgaggctctgaactccaaaggtggagggaaccaagtgtccctgctcaacatc
atgatggacctgaagaagtgctgcaaccacccctacctgttccctgtggctgctgtggag
gctcctgttttacccaacggctcttatgacggcaacttactggtgaagtcctcaggaaaa
ctgacgctgcttcagaaaatgctgaagaaactcaaagacgaaggacacagagttttgatt
ttctcccagatgacaaagatgttggatctgcttgaggattttctggagtttgaaggttat
aaatatgaacgcattgacggaggaattactggaggcctacgacaggaggccattgaccgc
ttcaatgcgccgggcgcgcagcagttctgcttcttgctgtcgacacgagccggaggcctc
ggcatcaacttggccagcgccgacaccgtcatcatctacgactctgactggaatccccac
aacgacatccaagctttcagcagagcccaccgcataggccagaacaggaaggtgatgatc
tatcgttttgtgactcggggctcagtggaggagagaatcacccaagtggcgaagaggaaa
atgatgctgacccatctggtggtgcggccgggcctgggctccaaaaccggctccatgtcc
aaacaagaactggatgacatcctcaaatttggcaccgaggagcttttcaaagatgaaatg
gaggcagcacgtgcaatgggtgacaacaaagatggtgaagagggcaatgtgattcactac
gacgatgatgccatctcaaagctgctggaccgcagccaggacgccaccgaagacacagag
atccagaacatgaacgagtacctgagctccttcaaggtggctcagtatgtggtgaaagag
gaagatggagaggaggaggtggagcgggagatcatcaagcaagaggagaacgtggaccca
gactactgggaaaaactcctccgccaccactacgagcagcagcaggaggatctggcccga
aacctgggcaaaggcaaacgcatccggaagcaggtcaactacaacgatacgacgcaggag
gaccaagagtggcaggatgatctttcagacaatcagtcggagtactctgtggggtccgaa
gacgaggatgaagacttcgaggagaggcctgaaggcggacgcagacactctcgtcggcag
ctcaagaacgagaaggacaaacctctgccgcccttactggctcgagtcggaggcagtatt
gaggtcctggggttcaacgcgcgccagagaaaagccttcctcaacgccatcatgcgctgg
gggatgccacctcaggatgctttcaactctcactggctggttcgggacctgagagggaag
agcgagcgtgagttcagggcctacgtgtctctgtttatgagacatctgtgcgagccgggg
gcagacggagccgagacctttgctgacggagtcccccgcgagggactgtctcgtcagcac
gttctcaccaggatcggagtcatgtcccttgtcaggaaaaaggtgcaagagtttgagcat
gtcaacgggaagctgagctctccagatctgattcccatcggactggagctgaagaagctg
acggagagcgtgtcttctgatcccaacacccccgtgccggccagccccgtcgctacacag
cccggcacccccgtcccaccagagaaggccgagtctttcttgggtaccgctgaggacaag
gagaccacagagcacgatagcaagaagctgtcagagcaggaagcctccggtgcagagaca
gcatctgcacccgagaaggcagctgacagtgaagagactaaggccagctcggaggagaag
acgggagacgagaggaacagaaccgagtcgccctccacaaagaccgagccatctgctaac
tcaaaggagtctgctttcaaacaggccgagctgccatccagtcacacctcaccgaagatg
gagccatgcaaggaaacagagaggccctcagaaaaaggagacactgattatcctctggca
aaaactgaagacaaagaaaacaagccagatgatgtgaagagtgaagacgcattagagggt
cgattaaatggcgacaaagacactttggatgagatggatgagggcaggaaggaggacaag
aacggattcaaagccaagttcatgtttaatatcgctgacggaggttttacagagctgcac
accctctggcaaactgaagagcgggcggcgctgtcttctggaaagatgcatgacatctgg
caccgtcgccatgactactggttgttggctggcatcgtaacacatggctacgcccgctgg
caagatattcagaatgacccgcgttatgcgattctgaatgagcccttcaagactgagata
cataagggcaactacctagagatgaagaacaagttcctcgctcgtcgctttaagttgtta
gagcaggctctggtgatcgaggagcagctgcggcgggcggcttacctgaatatgacccag
gaccccagtcacccggccatggctctcaacacgcgcttcaccgaggtggagtgtctggca
gagtcccaccagcacctgtccaaagagtccctggcagggaacaagcctgccaacgctgtg
ctgcacaaagtgctgaaccagctggaggaactgctgagtgacatgaaagcagatgtgaca
cgactccccaacatgctgtccaggatcccgccggtgtcggcccgcctgcagatgtctgag
aggagcatcctgagccgcctcaccagccgaggcagcgaacctccacctcagcagcctttt
agccagagtgcgttcggctgctcccagatgtacagcagcggttttggcggggcgttccga
ggaccaggcggacagcccatggtcaactacagtcagatgcccctgggaccttacgtcagc
gtgtccactaatggacctccaccgcctacaagccatctggacaagaagtcgcttgactcc
ttgagagacgtggcgacgcctgatctcaagtcaggcaaacctagtgatgtcatctgcatt
gaggactag
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integrated database retrieval system
