Brachyistius frenatus (kelp perch): 138628387
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Entry
138628387 CDS
T10614
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
138628387 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfre03036
]
138628387 (chd8)
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138628387 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
138628387
NCBI-ProteinID:
XP_069567501
LinkDB
All DBs
Position
Unknown
AA seq
2575 aa
AA seq
DB search
MADPIMDLFEDTPLFNLDALPDDSFSQGSSDPVEEALKLALGQVDPTPEPEPASELTVST
SLGVPVAAPAIPDPAPAPVPVQQPVPVVAAQTVSIAAAPAVAPAPADTVPQILAHTTIPI
TSVATSSTVLLSSPLTVSSSPVTTTATTQQLTQITHQLTAQQLAAITQQAGGKIVILKGP
QGQAQVLQTVTGTTGQTGGKVIRVLSGTPLKPGMSILQGGAVLNQASPGQTQVKVGALGV
QRLFQSPNGPVKQVLFTSMPQQVQQTQGQQVQVQIPAQAQIAQGQTQVQVQAQGQVQLQP
AMQTQGGEAKRITLVLQQPSQTGSGTPAGQAVTAQQHVAQVQQVQTQGGQQHQAPTRLVL
GQLPGGKLVLQGSQLAALTQARAAGQAGGQPKVLTIQLQVQQQPNQQGGIKYQLVSGAGN
TGSPQVLQISQGQGGQRVAVPLKVLLQPQTSSASSTGGAVSVVKVINTSTAGPSATTTST
SQAIRITKAPGEPASVRRVEILCKQEKANRIVAEAIARAKARGEKNLPRVLNQDELPATQ
TSPEMGGTVTVVSATKKKNSGGGSKKKGPAAGGTVPKTAGGADKKGKVKTLGGTTAVVGG
TVIPGGGNKSKSKTKTNTITLVGAKKRKRNASSDHSDGELSPASPTALEDDMITKRRSNR
VVKRKKYTEDLDIKITDDEDEQEDVDVTTTAAAVASISGGTAAQLKQEMELDGDGQPSMQ
FFVENPSEEDAAIVDKVLSMRLTTKEVSQGQYTNVEEFFVKYKNYSYLHCEWASMEQLEK
DKRIHQKIKRFKTKHAQMRHLFQEEEEPFNPDYMEADRILDVSHSVDKDNGEPVIYYLVK
WCSLPYEDATWELKEDVDEGKVEEFSKIQDRQPRLKRAARPSAGSWKKLEETREYKNSNT
LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEVYAASIQGPFLVIAPLST
ITNWEREFSTWTDMNAIVYHGSLASRQMIQQYEMYCKDDKEHLIPGAYKFDALITTFEMV
LSDCPELREISWRCVIIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFSL
LHFLEPTQFPSETEFLRDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIE
VELTDVQKKYYRAILERNFSFLSLGANSNSNVPNLLNTMMELRKCCNHPYLINGAEEKIV
AELREVYDPLASDFHLQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYL
INKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDS
DWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNK
ESNVNGIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRATTITIESEGK
GSTFSKASFVASENRNDIALDDPEFWQKWAKKADIDMDTINRKNTLVIDTPRVRKQTRQY
SSLRGEGGDLSDLESDDEYPPANSRQSRASRRADRHSGGGYGRTDCFRVEKHLLVYGWGR
WKDILSHARCKRRLSERDVETICRVILVFCLLHYRGDENIKSFIWELITPPENGREPQTL
LNHSGLSIPVPRGRKGKRVKAQSTFDVQKVEWIRKYNPDTLLLDDSYRKHLKHQCNKVLL
RVRMLYYLKQEVIGEHAESVLKGADIRDVDIWMPEMEQQEVPAGWWDSEADRSLLAGVFK
HGYEMYTTMRADPCLCFLERAGRPDDKAIDAEQHTGDAELGDEADYDKYSEDPEFKPASR
HTKDLFEEPDSMNVDDEIIVEDKAMPVVTESVTSQSGACDWPSSSSLTARLRRLITAYQR
SYRQEQLKIEAEAKGDRRRRRCEQASKLKEIARQERQQRWTRREECDFYRVVSTFGVEKI
KKELGIPEGGDAEFDWNRFRTFARLDKKTDESLSRYFRSFVAMCRRVCHLRPGRGEEPSD
LSQTVAPITEERASRTLYRISLLRRLRERVLPHPSLKERLPLAPSSAELPAWWNIPDHDR
QLMLGAALHGVSRTELSIFPDPQFTFNQAREEFIQNQQVPALPPPPPPPPPPPPQLPPVM
TLSLPKTEEDMPAVKGEGTDESARLLGGEIGAELQNTPLSHHDGKVRGEGWSFKRSRARG
ERSGGGRKGEGGSDSDSDSDSGSSSSERSGSSDESGESEEEVEGASLKVRDVDEENSLLS
MTPSQDGIPPPDPLRVDWPKDRMLINRLDSLCTLVVSGQWPSGRRYVSEAHLNTGSELAA
DEMAFTRLIRKPSGVPGGPGGDGEDGEFTVKLLKEEGLKLTFSKQALMPNGSAGESSGRK
KRKDQELSDLDGLHDPSERTPRRRDPPPWLKENPDYEVEGDMLELLVNRSKRKRRRRADK
APTGTEKVKLINMRTGKKVGAAFCPMLQDLREYLEENADIAVAPEWSETVRNSGFLPETF
FHRLLTEHSEIPKKSRRRHHHHHHHHHHLTPEPIPEDPNLDGVEEETLVSDGAYMMDEED
IETSHHFLTSPDFDVKMEGGDSLSQGDYDSSDQEALLDDVIIAQKDSDSSSSSED
NT seq
7728 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcccattatggacctctttgaggacacacccctgtttaacctggatgccctc
ccggatgactccttctctcagggctcctcagaccccgtggaggaagcgctcaagctggct
ttgggccaggtggatccgacgcccgagccggagcccgcctccgagctcacggtcagcaca
agccttggcgtacctgtagcagctcctgccatcccggaccctgctcctgctccagtcccc
gtacagcagccggtgccagtggtggctgctcagactgtttccatagctgcagctcccgct
gtggctcctgcccctgctgatactgtacctcaaatactggcccacaccaccatacccatt
accagtgtggccaccagtagcactgtcctgctgagctcacctctgactgtttctagctcc
ccggttaccaccacagccaccacgcagcagctcacacagataactcaccagctcactgcc
cagcaattagctgccatcacgcagcaggctggtggtaaaatagtcatcctcaaaggtccc
cagggtcaagcccaggtgctgcagactgtaacaggaaccacgggccagactggcggaaaa
gtaatccgtgtgttgtctggcactccactcaaacctggcatgtccatactgcagggggga
gcagtcttgaatcaggcgagcccaggacaaactcaagtgaaggtgggtgctctgggggtg
cagaggctgtttcagtctcccaatgggccagtgaaacaggtgttgttcacttccatgcct
cagcaggtacagcagacgcaaggacagcaagttcaggtccagataccagcccaagcacag
atagctcaaggccagactcaagtccaagtccaggcacaaggccaggtgcagctccaaccg
gccatgcagacgcaggggggagaggcaaagcgcatcaccctggttctccagcagccctcc
cagacaggttctggcacgccagcaggtcaagctgttacagctcagcagcatgttgcacag
gtgcagcaggttcagactcaagggggccagcagcaccaggccccaactagactcgtgctg
ggtcagctccctggtggcaaactggtcctccagggaagtcagctagcggccctgacccag
gctcgggctgcaggccaagctggagggcagcccaaagtcctcacaatccagctgcaggtg
cagcagcagcccaaccaacaaggaggaattaagtaccagctggtttcaggagctggcaac
actggaagcccccaggttttgcagatatcccagggccaagggggccagagagttgcagta
ccactaaaagtgctcctacagccccagacgagctcagcttcgtccactggtggcgccgtc
tctgtggtgaaggtcatcaacacttcgacagcaggtccctccgctacgaccacctctaca
tcccaggccatccggatcaccaaggcccccggcgagcctgcctcagtgcgacgagtggag
attctctgcaagcaggagaaagccaaccgtattgtggctgaagctatagcccgggccaaa
gcacggggcgagaagaacctgcccagagtcctgaaccaggatgagctgccagccacacag
acgtccccagaaatggggggtactgtgactgtggtgtctgccacgaagaaaaaaaacagt
ggtgggggaagcaaaaagaaaggtcctgcagctggaggaacggtgcccaaaactgcagga
ggggctgacaaaaagggcaaagtgaagacactaggaggaacgactgcagtggttggaggc
acagtgatacctggaggtgggaacaaaagcaagagcaagacaaagacaaacactattact
ctagtgggagccaagaaaagaaagaggaacgcgtcctcagaccactctgacggggagctc
agcccagcctcacccactgcactggaggatgacatgattacgaagaggcgctccaatcgt
gtagtgaagaggaagaagtacacagaggacctggatatcaagataacggacgatgaagac
gagcaggaagacgtcgatgttactacaactgcggcagctgtggcctccatcagcggcggg
acggcagcgcagctcaaacaggaaatggagctggacggtgatgggcagcccagtatgcag
ttctttgtggaaaaccccagtgaggaagatgctgccattgttgacaaagtgctgtctatg
aggttaaccacaaaggaggtgtctcagggccagtacaccaacgttgaagaattctttgtt
aaatacaagaactattcttacttacactgcgagtgggccagtatggagcagctggagaaa
gataagaggatccatcaaaagatcaagaggttcaagaccaagcacgcacagatgaggcac
ttatttcaggaggaagaggagccttttaacccagactacatggaggcggacaggatcctg
gatgtgtcccacagcgtggacaaggacaatggcgagcctgtcatctactacttggtgaag
tggtgctctctgccatacgaagacgccacatgggaactgaaggaggacgtggacgagggc
aaagttgaagaattcagcaaaatccaagaccgacaacctcgcttgaaaagagctgcacga
ccttctgccggctcctggaagaagctggaggagaccagagagtacaagaacagcaacaca
ctcagagagtatcagctggaaggagtcaactggctgctcttcaactggtacaacaggcag
aactgtatcctggcagatgagatgggtctggggaagaccatccagtctatcgcgctgctg
tctgaggtgtacgctgccagtatccagggccccttcctggtcatcgctcccctctccacc
atcaccaactgggagagggagttctccacgtggaccgacatgaatgccatcgtgtaccac
ggcagcctggccagccgacagatgatccagcagtacgagatgtactgcaaagacgacaag
gagcatttgatcccgggtgcgtacaagtttgacgccctgatcacaacctttgagatggtg
ctgtccgactgcccggagctgagagagatctcctggcgctgtgtgatcatcgatgaggct
caccgcctcaaaaatcgcaactgcaagctgttggacagcttaaagatgctggacctggaa
cacaaagtgttgttgaccggcactcctctccagaacactgtggaggaactcttcagtctg
cttcacttcctggagcccactcagttcccctctgaaactgaattccttcgagacttcgga
gacctcaaaactgaggaacaggttcagaagttgcaggcaatcttaaagcccatgatgtta
cgaaggctcaaggaggatgttgagaagaacttggcacccaagcaggagaccatcatcgag
gttgagttgacggatgtccagaagaaatactaccgggccatcctggagaggaacttcagt
ttcctcagtttaggggcaaacagcaacagcaatgtccccaacctgctcaacacgatgatg
gagctccgcaagtgctgcaaccacccctacctcatcaatggtgcagaggagaagatcgtg
gcggagttgcgggaggtgtatgacccgctggcctctgacttccatttgcaggccctgatt
cggtcggccggtaagctggtgctactggacaagctgctgcctcgcctcaaggccggcggc
cacaaagtgctcatcttctcccagatggtgcgctgcttagacattctggaggactacctc
atcaacaagagatacctttatgagcggattgatggcagagttcgtgggaacttgcgacaa
gctgccatcgatcgcttcagcaagcctgattcagatcgcttcgtcttcctgctgtgtact
cgtgccggcggcctgggtattaacctcactgctgctgacacatgtgtgatattcgactct
gactggaaccctcaaaatgacctgcaggcccaagcacgatgtcatcgtattggccagtcg
aaggcggtcaaggtctaccggctcatcaccaggaactcttatgagagggagatgctggat
aaagccagtctgaagctcggcctggaccgtgctgtcctgcagagcatgagcggcaacaaa
gagagcaacgtgaacgggatccagcagttctccaagaaggagatcgaggatcttctgagg
aagggagcctacgctgccatcatggatgagaacgatgagggcagtcgcttctgtgaggag
gatatcgaccagatccttcagcggagagccacgaccatcaccattgagagcgagggaaag
ggctccacgttctccaaagccagctttgtggcctctgagaaccgcaacgacatcgccctt
gatgaccctgaattctggcagaagtgggccaagaaagccgacatagacatggacaccatc
aatcggaagaacactctcgtgatcgacactcccagagttcgcaagcagacccgtcagtac
tccagtttacgtggtgaaggtggagacctgtctgatctagagagcgatgatgagtatcca
cctgccaactctcgacagtcgcgggcctctcgacgcgccgaccgtcacagcggaggcggt
tacggccgcaccgactgtttccgggtggagaaacacctgcttgtctatggttggggccgt
tggaaggacatcttgtcccacgccaggtgtaaacggcgtctgagcgaacgcgacgtggag
acgatctgccgtgtcattctggtcttttgtctgcttcactatcgcggagacgagaacatc
aagagtttcatctgggagctcatcacgccgccagagaacggacgagaaccacaaacacta
ctcaaccactcgggcttgtctatccctgttccgagaggcaggaagggtaagagagtaaag
gcccagagcacatttgatgttcagaaggtggagtggattcgtaagtacaaccctgacacg
ctgctgctcgacgacagctaccgaaagcacctcaagcaccagtgcaacaaggtgttgctg
agggtgcgtatgctctactacctgaaacaggaggtgattggtgaacatgctgagtctgtc
ctgaaaggggccgatatcagggatgttgacatctggatgcctgagatggagcagcaggag
gtgcctgcaggatggtgggactctgaggctgaccgctctctgcttgctggtgtattcaaa
catggttatgagatgtacaccaccatgcgcgctgatccctgcctctgcttcctggagaga
gccggtcggcctgatgacaaggccattgatgccgagcaacacaccggtgacgctgagctc
ggagacgaagctgattatgataaatactcagaagatccagagttcaagcctgcgtcaaga
cacaccaaagatcttttcgaggagccggattcgatgaacgtggacgatgagatcattgtg
gaagacaaggccatgccagtggtcactgagagcgtaaccagccagagtggtgcgtgcgac
tggccctccagctcatcgctgacagcgcggctgcggcggctgatcacagcctaccagcgc
agctacagacaggagcagctgaagatcgaagccgaggcgaagggcgaccgcagacgcagg
cgctgcgagcaggccagcaagctgaaggaaatcgcacggcaggagcgacagcagaggtgg
acgcgtagggaagaatgtgatttctaccgcgtggtgtcgactttcggggtggagaagatt
aaaaaggagctcggtatccctgaaggcggagacgcagaattcgactggaaccgtttccgt
acctttgctcgtctggacaaaaagaccgacgagagcctcagccgttacttccgctccttc
gttgccatgtgccgcagggtgtgccacctccgcccgggtcgtggtgaagaaccatcagac
ctctctcagaccgtggcccccatcactgaggagcgggcctcccgtaccctctaccgaatc
agcctcctgcgtcgccttcgtgagcgagtgctcccccacccctccctgaaggagcgtctg
cctctggctccgtccagcgccgagctgcccgcttggtggaacataccggatcacgatcgt
cagctgatgctcggcgccgcgctgcacggcgtcagtcgcaccgagctctccatcttccca
gacccgcagttcaccttcaaccaagcccgcgaagagttcatccagaaccagcaggtgcca
gccctcccgccgccaccgccgccgccgccgccgccccccccccagttaccgcccgtcatg
acactcagcctgcccaagactgaggaggacatgcctgcagtgaagggggagggaactgac
gagagcgcccggttgctcggaggtgaaatcggcgccgagctgcagaatacgccgctgagt
caccacgacggcaaagtgcgaggcgaaggctggagcttcaagaggagcagggcgaggggg
gaaagatcaggaggaggaaggaagggcgagggagggtccgattcagattctgattctgat
tcaggctcatcttcctcggagcgatcaggcagcagcgatgaaagcggagagagtgaggag
gaggtggaaggagcgagcctgaaggtgcgtgatgtggatgaagaaaatagtttactctcc
atgactccgtctcaggatggcatccctcctcctgatcctctcagagttgactggccgaag
gaccgcatgttgatcaaccgcctggacagcttgtgtacgctggtggtgagcggtcagtgg
ccctcggggcggcgctacgtgtcggaggctcacctcaacaccggctcggagctggcggca
gatgagatggccttcacaaggttgatccgtaaacccagcggagtgcccggtgggcccggc
ggagacggagaggacggagagttcaccgtcaaactcctcaaggaggagggcctgaagctg
acgttctccaaacaggccctgatgcctaacgggtcagcaggagagagcagcggccgcaag
aagcgcaaggaccaagagctctcggacctcgatggactccacgatccttcggagcgtact
cctcggcgcagggacccccccccgtggctgaaggagaacccagattatgaggtggaggga
gacatgctggagctacttgtgaacaggagcaagaggaagaggaggaggagggcagataaa
gcccccacaggcacggagaaggtcaaactcattaacatgaggacaggaaagaaggtcgga
gctgctttctgtccgatgctgcaagacctgagagaatatctggaggagaacgctgacatc
gctgtagcacccgagtggtccgaaacggtccgcaactcgggctttctgcccgagaccttc
ttccatcgcctgctgaccgagcactcggagatcccgaagaaaagtcgacgccgccatcac
caccaccaccaccaccaccaccacctcactccagagccgatccccgaagaccccaacctg
gatggagtggaagaggagactctggtgtcagacggagcctacatgatggacgaggaggac
atcgagacctcccatcacttcctcaccagtccggactttgacgttaaaatggagggtggc
gacagcctctcccaaggtgactatgacagctcggatcaagaagcgctattggacgatgtg
atcatagcacagaaggactccgactcctcatcaagctcagaggattga
DBGET
integrated database retrieval system
