Brachyistius frenatus (kelp perch): 138628673
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Entry
138628673 CDS
T10614
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
138628673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138628673
03041 Spliceosome [BR:
bfre03041
]
138628673
03036 Chromosome and associated proteins [BR:
bfre03036
]
138628673
Enzymes [BR:
bfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138628673
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138628673
mRNA cycle factors
Common to processing body (P body) and stress granule
138628673
Spliceosome [BR:
bfre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138628673
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
138628673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
138628673
NCBI-ProteinID:
XP_069567941
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MSHVAVENAHGLEQQLAVLDLSGADGQGGGSNSDWRYIPPHLRSKDISKNAGNAFAAGRQ
GGYNMAPPANYGWDAGRNNFVNGYHDNRMTANTFNRGPPRMERGRGGVGGGGYRGNRGGA
FNPINPAQPMSFDAGGWNTAKEAYNSFGNNRGKSAFFNDRGNANRGRFEHGGFSGGGGGG
GGNSRWVEESREDGDWSKPTQRNERLEHELFSGSNTGINFEKYDDIPVEATGQNCPHHIE
SFQDVDMGEIVMGNIALTRYTRPTPVQKYAIPIVKSKRDLMACAQTGSGKTAAFLLPILS
QIYTEGPGDALNAAKASGQENGKYGRRKQYPISLVLAPTRELALQIYDESRKFSYRSRVR
PCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMG
FEPQIRRIVEQDTMPHKGIRQTMMFSATFPKEIQILARDFLDEYIFLAVGRVGSTSENIT
QKVVWVEESDKRSFLLDLLSATVIPSEVQDNTGDNIEKPGKDSLTLVFVETKKGADALED
FLYREGYACTSIHGDRSQRDREEALNQFRSGKCPILVATAVAARGLDISNVKHVINFDLP
SDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKDLLDILVEAKQEVPSWLESLAYEHQ
HKSSNRGRSKRFSGGFGARDYRQTAAGANVGGFGGRGGRNQAGHGGTRGFGGGGFSNFYN
SDGYGGNYSHSQVDWWGN
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggccgtcgagaatgcacacggcctggagcagcagctcgctgtcctagac
ttgagcggtgcagacgggcaaggtggaggatccaacagcgactggcgatatattccgcca
catttacggagcaaagatatttccaaaaatgcaggaaacgccttcgccgccggacgacag
ggtggctacaacatggcgcctccagccaactacggctgggacgcgggacgcaacaacttt
gtcaacggctaccacgacaaccgcatgaccgccaacacgttcaaccgcggcccgccccgc
atggagcgcgggcgaggtggtgtcggaggaggcggttaccgcggcaacaggggcggagcc
ttcaaccctatcaacccagcacagccaatgagcttcgatgcaggcggctggaacacggcc
aaggaagcctataacagtttcggcaataaccgagggaagtcggccttcttcaatgacaga
ggcaacgccaacagagggaggttcgagcacggtggatttagtggtggtggaggaggagga
ggagggaacagccgctgggtggaggagtccagagaagatggagactggtccaaaccaaca
caacgcaacgaacgccttgaacatgagttgttctccggcagcaacaccgggattaacttt
gagaaatacgatgacattcctgttgaggccacaggacagaactgccctcaccacatcgag
agtttccaagacgtggacatgggggagatcgtcatgggcaacatcgctctgacccgctac
accagaccaactcctgtgcagaaatatgccattcctattgtcaagtccaagagagacctc
atggcctgtgcacagacaggttctgggaagactgcagcgtttctgctgccaatcctcagc
cagatctacactgaaggaccaggagatgctctaaacgcagctaaagcctctggacaggaa
aatggaaagtatggccgtcgtaagcagtaccccatctctctggtgctggctccgaccagg
gagctggcactgcagatatacgatgaatccaggaagttttcctaccgctccagagtgcgt
ccctgtgtcgtgtacggaggagccgacattggccagcagatcagagacctggagagaggc
tgccacctgctcgtggccacgccgggacgactggtggacatgatggagagaggcaagatt
ggactggactactgcaaatacctggtcctcgatgaggcagatcgtatgctggacatgggc
tttgaaccacagataagacgcatcgttgaacaggacaccatgccgcataaaggcatccga
caaaccatgatgttcagcgctacgtttcctaaagagatccagatcctagcaagggatttc
ctggacgagtacatcttcctggcggtgggcagagtgggctccacctccgagaacatcact
cagaaggtggtgtgggtggaggagagcgataagaggtcgttcctcctggacctgctcagt
gctacagtcatccccagtgaggtacaggacaatactggagacaacatagagaaacctggc
aaggactccctgaccctggtttttgtggagaccaagaaaggcgctgatgccttggaggac
ttcctgtatcgggagggctatgcctgcaccagtatccatggcgaccgttcccagagagac
cgagaggaggctctgaatcagttcagatcaggaaaatgtcccattctggtggctacagcg
gttgcagctcggggtctggacatctccaatgtgaaacatgttattaacttcgacctgcca
agtgacatagaggagtatgtccaccgtattggacgtacggggcgagtaggaaacctgggg
ctggccacgtcgttcttcaatgataaaaatggaaacatcacaaaagacctgctggacatc
ctcgtcgaggccaagcaggaagttccctcgtggcttgagagcctggcctacgaacaccag
cataaaagtagcaacagaggacgctctaagaggttctctggtggttttggagctcgtgat
tatcgtcagacggctgccggagccaacgttggagggtttggaggacgcggaggacgcaac
caggcaggacatggaggaactcgtggctttggaggaggaggttttagtaacttctacaac
agcgacggctacggaggaaactactcacactcccaggttgactggtggggcaactag
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