Brachyistius frenatus (kelp perch): 138628883
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Entry
138628883 CDS
T10614
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04120
Ubiquitin mediated proteolysis
bfre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138628883 (syvn1)
04120 Ubiquitin mediated proteolysis
138628883 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfre04121
]
138628883 (syvn1)
Enzymes [BR:
bfre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138628883 (syvn1)
Ubiquitin system [BR:
bfre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138628883 (syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
zf-RING_Vps41
FAR1_N
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
138628883
NCBI-ProteinID:
XP_069568305
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MVRALLVTATSLALTGAVVAHAYILKNQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHMRVLSLMGLLAVMDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYILHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAAAQAPPPAPAAPANAP
AAPPPNVAPGMLPGFPPGIFPFWGPFPAVPPPAPAAAAPAPGTDTSQSSTEATQTAGTTQ
PTSATADSPTAAAAPGSAIPGFPFSFPPPPFPTAPWLPMPPPPPFVSSMPPPPPSLSRLS
EEELTELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRAEGSAGEASG
TNQTPSASTAGSNTESPSKEKDSSISDEASGATVSSQPADSTSTASDTERKEQMDEGAEE
NEDGEPSAAELRRRRLRKLETSSSSSSPPPDN
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcactcttggtgacggccaccagtctggcattgactggggctgtggtggca
cacgcgtacatcctcaaaaaccagttctacccgactgtggtctaccttaccaagagcagc
cccagcatggcggtgttgtacattcaggcattcgtgctggttttcttgctgggaaagttc
atgaggaaggtcttcttcggacaactaagggctgcagaaatggagcatctgatcgagcgc
tcctggtacgcggtgaccgagacgtgcctggctttcactgtgttcagggatgacttctcc
ccccggtttgttgccctcttcaccctcctgctcttcctcaagtgcttccactggctggct
gaggaccgggtggactttatggaacggagtcccaacatatcatgggtgtttcacatgaga
gtattatctctcatggggttactggctgtcatggacttcctgtttgtcaaccatgcctgt
cacagcatcatcacccgaggagcttcagtccagctggtttttggatttgagtatgccatc
ctgctgaccatggtgctgacgaccttcatcaagtatattctgcacacggttgacctgcag
agcgagaatccctgggacaacaaggctgtctacatgctctacaccgagctcttcacagga
ttcatcaaagtgctcctgtacattgccttcatgaccatcatgataaaggtccacaccttc
cccctgtttgccatccgccccatgtatttggctatgaggcagttcaaaaaagctgtcaca
gatgctataatgtcccggagagccatccgcaacatgaatacactatatcccgatgcgact
cctgaagatcttcaggcgtcagacaacgtctgcatcatctgtcgggaggaaatggtcacc
ggagccaagaagctaccttgtaatcacattttccactccagctgcctgcgctcctggttc
cagaggcagcagacctgcccgacctgtcgcatggacgtcctccgagcgtcaaacaacaac
cagactccggctgcggcccaggctccgcctcctgccccggcagccccagccaacgccccc
gcagccccgcctcccaatgtggctccaggcatgttaccaggctttcctcctggcatcttc
cccttctggggtcccttccctgcggtgcctcctcctgccccagcggctgcagctccagct
cccggtactgatacttcacaaagcagcacggaggcgacgcagacagccggcaccacccag
cccacatcagctactgcagactctcctacagcagcagctgctccaggatcagcaatccca
ggcttccccttctctttcccccctcctccattccccactgccccgtggctgcccatgccg
ccacctcctccctttgtgtcatcaatgccgcctccaccgccgtctctgtcccggctgtcc
gaagaggagctgacggagttggaggccgagggccggcggggcctggaggccagactccag
tgtctccaaaacatccacaccctgctggacgccgccatgctcaacatccaccactacctc
agcaccgtcgccaccctcactcctcctcgggctgagggcagcgctggagaagccagtggg
acaaaccaaacaccgtcggcttctacagcgggaagcaacacggagagtcccagcaaggag
aaggactcatccatctctgatgaagcgagcggagcgacggtctcctctcaacccgctgac
tccacctccaccgcctccgacacagaaaggaaagaacagatggacgaaggagcggaggag
aacgaggacggagaacccagtgctgctgagctgaggcgccgccgcctccgtaagctagag
acatcgtcttcatcttcatccccccctccggacaactga
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