Brachyistius frenatus (kelp perch): 138628892 Help Entry 138628892         CDS       T10614                                  Symbol ccdc88ab Name (RefSeq) girdin isoform X1   KO K25392   girdin Organism bfre  Brachyistius frenatus (kelp perch) Brite KEGG Orthology (KO) [BR:bfre00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:bfre03037]     138628892 (ccdc88ab) Cilium and associated proteins [BR:bfre03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    138628892 (ccdc88ab) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HOOK_N HOOK KASH_CCD DUF4472 Motif Other DBs NCBI-GeneID:  138628892 NCBI-ProteinID:  XP_069568319 LinkDB All DBs Position Unknown AA seq 2019 aa AA seqDB search MESEVFTPVLEQFMLTPLVCWVKTVGQPTVTDGTQLAEYIELVDGIYLNEIMLEINPKAT VQRTNKKVNNDSTLRIQNLSILTRQIKAYYQETLEQLVMMPLPNVLVLGRNPLSEQGLEE MKKLLLLLLGCAVQCEKKEEYIERIQTLDFDSKAAIASHIQEVTHNQENVVDLQWLESGE MPPEDLDGLSRNLAFHLKRLVDERDTQLETIVELTQERDCVQLSPLAPYASQSPGDSPSM RRTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDTRQELENMEVEFKRLQQESYQLLS DARSARAYRDELDALREKAMRVDKLESELTRYKERLHDIEFYKARVEELKEDNQILLETK TMLEEQLDGTRTRSDKLHLLEKENLQLKSKMHDLEMERDMDRKRMEELLEENLVLEMAQK QSMDESLHLGWELEQLSKTPELTEAPQKSLGEEVNELTSSRLLKLEKDNQTLLKTVEELR GAASKDTVTKLAKVNQENQKLNQKLEQLETELTADKESLRSAESLSTDLMKEKALLEKTL ETLRENSERQLKGLEQENKHLSQTVSSLRHRCQVGAEARVKDVEKENRVLHESICETAAK LNKMEFERKQLRKELEVMKEKGERVEDLEIQMQKLERDNESLQKKVASLGITCEKVSSLE KENTELEAEGRRLKKKLDALKNMAFQLEALEKENSQLEHENLELRRSAENLRSAGAKAAQ LEAENRELECERSQMKRSLELLKASSKKTERLEVSYQGLDTENQRLQKALENSSKKIQQL EVELQEVETENQTLQRNLEELKISSKRLEQLEQENKTLEQESCQLEKDKKHLEKENKRLR QQAEIRDSKLDDSNQRISSLEKENRTMGKEMIFFRDSCTRVKDLERENKELVKLATIDKK TLVTLREELVSEKLRTQQMNNDLEKLTHELEKIGLNKERLLHDESSDDRFKLLETKLEST LKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVQSSPPRG GENPQAVSKWEKESHETTRELLKVKDRLIEVERNNATLQAEKVALRSQLKQLETQSSNLQ AQIVAVQRQTASLQENNTTLQTQNAKLQVENSTLSSQSAALMAQNAQLQSQQSSVEGERE GALKDKEELRSTYELLLRDHEKLAALHERQASEYEALIGKHGGLKTSHKSLEQQHRDLED KYKQLLQRKGDLEELEKNLKEQQEKMALQNHTHQATADQYKLLKEENDRLNTTYRHLVKD NENLQLDHKNMKSQLNSAKLDQTKLEAEFSKLKEQYQQLDISSTKLTNQCELLSQLKGNL EEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ YKFYDPSPPRRRGNWITLKMRKLIKPKSRDRIRSLTLTPSRSESGDGFLTFPQDSQDSSS IGSGSNSLDDSLTQKRSSRRRGQQSHAQVQGSSNAIKRLPFMRNRSKDKDKAKAIYRRSM SMNDLLQTMAMAASPGAQWAGSSENLDGPEGGDGGMTGSSRRSGQRMKELAFSTNAIDCT ALTLPTAGRSRAKLRLQVKDNASCEDVAGSSEDPKSHASRPTSLHSNRTISSNSNNNSHL ISPLEVKGTLNGSLSRPHSESSGEFSLSLDQEVWSSSGSSPVQQPMSSRSSHQSPLQLRR SLDPSSAAGSPGQTQTQIRKTGSPSNEVLSLQQFLDEGIDPAESGSQENLTVDSPRLSTS SEHVQKERTLTKGRGILRSSSGRAAPVSIDRPPRSCGQPGRPTLRKAESTRVRGSAPIRS SLSMQGKATSVSDRLDSASSTLPRASSVISTAEGTTRRTSIHDMLSKDQRQPVSVDTHPP VASTKAGLRSQPTPSEYHPTSTNRKGPLTTVTSPLPKSLSLPCHSLEDPDLSTLESFLGP SFTVESVFMDSIFSEPADKNLPFLSLNPTLVSNISGPPVTSKPPPPPPPVPNHISTQNQT PPHSQSNGQSRSSSASEDVEPSNLNPEDNQSLWYEYGCV NT seq 6060 nt NT seq  +upstreamnt  +downstreamnt atggaaagcgaggttttcacgcctgtgctggagcagttcatgctcacgcctctggtctgc tgggtgaagacggtgggccagccgacggtgaccgatggcacccagttagcggaatatatt gaactcgtggacgggatttacctgaacgagatcatgctggagataaatccgaaggccacc gtgcagcggaccaacaagaaagtgaacaatgactcgacactgcgcatccagaacctttct attctcaccaggcagattaaagcctactatcaggagaccctcgagcagctggtgatgatg cctttaccgaacgtgctggtactgggccggaaccctctctctgagcaaggtctggaggag atgaagaaactgttgctgctgctacttggctgtgctgtccagtgtgagaagaaggaagag tacattgagcgtatccagactctggactttgacagcaaagccgccatagcatcccacatc caagaggtgactcataaccaggagaacgtagtggacctgcagtggttggaaagcggggaa atgcctcctgaagatctggacggcctctccagaaacctggccttccacctcaaacgcctg gtggatgaaagagacacgcagctggagactatagtggagctcacccaggagagggactgt gtgcagctgtctccgctggctccctatgcgtcccagtctcccggtgactcccccagcatg aggaggacagaaagccgacagcacctctccgtggagctggctgatgcgaaggccaagatc agacgcctccggcaggaactagaggagaagagtgagcagcttctcgacacccggcaggag cttgagaacatggaggtggagttcaagagacttcagcaagagagctaccagctgctgtcc gacgcccgctcggctcgggcctatcgcgacgaactggacgcgctcagagagaaggcgatg cgagtcgacaaactggagagcgagctgacccgatacaaggagcgacttcacgacatcgag ttttacaaggccagagtcgaggaactgaaggaggacaaccagattctgctggagacaaag accatgttggaggagcagctggatggcaccaggactcgctctgacaaactgcacctcctg gagaaagagaacctgcagctcaaatccaagatgcatgacctggagatggagcgggacatg gaccgtaagcgcatggaggagctgctggaggagaacctggtgctggagatggcccagaaa cagagcatggacgagtccctgcacctcggctgggagctggagcaactatccaagacacca gagctgactgaagcccctcagaagtctctgggcgaggaggtgaacgagctgacctcgagc cgcctgttgaagctggagaaagacaaccagaccctgctgaagacggtggaggagctccga ggagcggccagtaaggacaccgtgacaaaactggccaaagtcaaccaagaaaaccagaaa ctgaaccagaaattggagcagctggagaccgaactgacagcagacaaggagtcgctccgc agcgccgagtcactcagcaccgacctgatgaaggagaaggccttactggagaagactctg gaaacactcagagaaaactcagagagacagctgaagggtctggagcaggagaacaagcac ttgagtcagaccgtgtcgtcattgcgtcaccgctgccaggtgggcgccgaggcccgggtc aaagatgtggagaaagagaatcgcgttctccacgagtccatctgcgagacagccgccaaa ctaaacaagatggagtttgagaggaaacagctacgtaaggagcttgaagtgatgaaggag aaaggtgagagggtagaggacttggagattcagatgcagaagctggaaagggacaacgag agtctgcagaagaaagttgccagtcttgggatcacctgtgaaaaggtgtcttctttggag aaagagaacactgagctggaggcggagggccggcgtctgaagaagaaactggacgccctg aagaacatggccttccagctggaggctctggaaaaggagaactcccagctggagcatgag aacctggagcttcggcgctcagctgagaacctccggtccgcgggggccaaggccgctcag ctggaagccgagaacagggagctggagtgtgagaggagccagatgaagcgcagcctggag ctgctcaaagcctcgtctaagaagacggagagattagaggtgagctaccagggcctagat acagagaaccagcgcctgcagaaggctctagagaacagtagcaagaagatccagcagctt gaggtggagctgcaagaggtggagacggagaatcaaaccctccaacgaaacctggaggag ctgaagatctctagtaaacgcctggagcagctggagcaggagaacaagactctggagcag gagagctgccagctcgagaaagacaagaagcatctggagaaggagaacaagcgtctgagg cagcaggccgagatccgcgactccaagctggacgacagcaaccagcgcatctcctccttg gagaaagagaaccgcaccatgggcaaggagatgatcttcttccgggactcttgcaccaga gtcaaagacctggagagggagaacaaggagctggtcaaactggccaccatcgataagaag accctcgttactctcagagaggagcttgtgagtgagaagctgcggactcagcagatgaat aatgatctggagaaattgacccacgagttggagaagatcggtctgaacaaagagaggctg ctgcatgacgagagctcggatgacaggttcaagctcctggaaaccaaactggagtcgact ctgaaatcatctttggagattaaagaggagaagatcgctgcgctcgaggctagactgcag gagtcctccaacctcaaccagcaacttcgccaggagctgaagacggtgaagaaaaactac gaggcgctgcgtcagagagaggaggaggagaggatggtgcagagctcccccccaagggga ggggagaaccctcaggctgtcagtaaatgggagaaagagagtcacgaaaccaccagggaa ctgctgaaagtcaaagacagactcatcgaggtggagaggaataatgccacgctgcaggct gagaaggtggccctgaggagtcagctcaaacagctggaaactcaaagctccaacctgcag gctcagatcgtggccgtgcagaggcagacggcctccttacaggagaacaacacgacgctg cagacgcagaacgccaagctgcaggtggagaactctaccctgagctcgcagagcgccgcc ctcatggcccagaatgcccagctgcagagccagcagagcagcgtggagggagagcgcgag ggggcgctgaaggacaaggaggagctgaggtccacctacgagctgctgctccgcgatcac gagaagctggcggcgctccacgagaggcaggcgtccgagtacgaagccctgatcgggaag cacggcggcctgaagacctcccacaagagcctggagcagcagcacagggacctggaggac aagtacaagcagctcctgcagaggaagggggatctggaggagttggagaaaaacctgaag gagcagcaagagaagatggcactgcagaaccacacccatcaagcaacagctgatcagtac aaactgctcaaagaggaaaatgacagactgaacactacgtatcgtcacctggtgaaggac aatgagaacctgcagctggaccataagaacatgaagagccagttgaacagcgccaagctg gatcagaccaagctggaggccgagttctccaaactgaaggagcagtaccagcagctggac atcagctccaccaagctcaccaaccagtgcgagctattgagccagctgaaaggaaacctg gaggaggagaaccgtcacctgttggaccagatccagaccctgatgctgcagaatcgcaca ctgctggagcagaccatggagagcaaagacctgttccacgtggagcaaagacaatacata gacaagctgaatgagctgaggagacagaaggagaagctggaggagaagatcatggaccag tacaagttctacgacccttcacctccacgcaggcgcggcaactggatcactctgaagatg aggaagctgatcaagccgaagagccgggacaggatacgctccctcacgctgactccgtct cgttcggagtctggcgacggttttctgacgtttcctcaggacagccaggacagctcatcg attggctccggctccaactcgctggatgactcgctcactcagaagaggagcagcaggagg agagggcagcagtcccatgcccaagtgcagggctcctccaatgctataaaaaggttgcct ttcatgaggaacagatccaaggacaaagacaaggccaaggccatctaccggcgctccatg tccatgaacgacctgctgcagaccatggcgatggcggccagtcccggggctcagtgggcc ggcagctcagagaacctggacgggcctgaaggcggagacggcggcatgacgggcagcagc aggcgcagcgggcagcgcatgaaggagctcgccttctccaccaacgccatcgactgcacc gccctcaccctgcccaccgcagggcgcagcagggccaagctccggctgcaggtcaaagat aatgcctcctgcgaggacgttgccggctcctcagaggaccccaagagtcatgcctccaga cccaccagtctccatagcaacaggaccatcagtagtaacagtaacaataactcccacctc atctctcctctggaggtcaaaggcacgttgaacggcagcctcagcaggcctcacagcgag agcagcggcgagttcagcctgagtctggaccaggaggtgtggtcgagcagcggcagcagc cccgtgcagcagcccatgtcctcgcgctcctcccaccagagccccctgcagctgcgccgg tccctcgacccgtccagcgccgcgggcagccccggccagacccagacccagatcaggaag acgggctccccgagcaatgaggtgctttccctgcagcagttcctggacgagggtatcgat cctgcagagtctggcagtcaggagaacctcactgtcgactctcctcgcctctccacctcc tctgagcatgtgcagaaagagcgcaccttaacaaaggggcggggcatattacgctcgtcc agcgggagagcagcaccagtcagcattgaccggcccccgcgatcctgtggacaaccgggg cgccccaccctgcggaaggccgagagcacccgcgtgagaggctccgcccccatccgctcc agcctgtccatgcagggcaaagccacgtcggtctcagaccgcctggactccgcctcctct acgctgccccgggccagcagcgtcatctccaccgccgagggaaccacacggcgcaccagc atccacgacatgctgtccaaggaccagcggcagcccgtgtccgtcgacactcatcctcct gtggcttccaccaaggccgggctgcgctcccagcctacacccagtgagtaccaccccacc agcaccaaccgaaagggaccccttaccaccgtcacctcccctctgcccaagtcactcagc ttaccttgccatagcttggaggaccccgacctctccaccctcgagtctttcctcggccct tccttcactgtagagtcggtgttcatggactccatctttagtgagccagcagacaaaaac ctccccttcctgtctctcaaccccaccctagttagcaacatcagcgggccccctgtcaca agtaagcctccccctcctcctcctcctgtgcccaaccacatttccacccaaaaccagacc ccccctcacagccagtcgaacggccagagccggtccagctcagccagcgaggatgttgag cccagtaatctgaacccagaggacaaccagtctctgtggtacgagtacgggtgtgtgtga

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