Brachyistius frenatus (kelp perch): 138628909
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Entry
138628909 CDS
T10614
Symbol
pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138628909 (pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138628909 (pnpt1)
03016 Transfer RNA biogenesis [BR:
bfre03016
]
138628909 (pnpt1)
Enzymes [BR:
bfre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
138628909 (pnpt1)
Messenger RNA biogenesis [BR:
bfre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
138628909 (pnpt1)
Transfer RNA biogenesis [BR:
bfre03016
]
Prokaryotic type
tRNA degradation factors
138628909 (pnpt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
138628909
NCBI-ProteinID:
XP_069568381
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MRYLLRLGRSFARLHVRLSHRSVYSSHTNPRTVGVDLGEKKLEISSGRFARFADGSAVAQ
LGETSVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRELGTTDNEILTSRLI
DRSIRPLFPAGYFYDTQILCNLLAVDGVNDPDVLAINAASAALALSDIPWNGPIGAVRVG
MLNGELLVNPTRAQMASSSLNMIVAGAPSSQVVMIEASAENVLQQDFCHAVKVAVKHTTQ
IILAIQQLAREQKVTKRTPVKMFSAPADMVEHVRKISSESIYAVFTDYTHDKISRDEVIN
KIRLETEVDLKEKFPQAEPFEVIESFNTVSKEIFRSLVLNEYKRCDGRELTALRNISCDV
DLFKPLHGSALFQRGQTQVLCGVTFDSLESSIKADIITTALSGIKDKNFMLHYEFPPYAT
NEIGKMGGLNRRELGHGALAEKSLRPVIPKDFPFTIRVTAEVLESNGSSSMASACGGSLA
LMDAGVPISSAVAGVAIGLISKAKPETPAEIEDYRLLTDILGIEDYLGDMDFKLAGTNKG
ITALQADVKIPGLPLRIVMEAIQQATVAKREILGIMNKCIVKPRESRKENGPVVENVRVP
VSRRARFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPTPGAMNEAQEFISEICKDDQE
LQLEFGAIYTATITEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSALGLEVGQEIQV
KYFGRDPTDGRMRLSRKVLQSPAATVVKMLSDKQSISMGLSNSHTNSTES
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgagatatttgctcagactgggccgctcgtttgcccgccttcacgtccgtttgagtcac
cggagcgtttacagcagccacacgaacccgcggacggtgggagtggacctgggcgagaag
aaacttgaaatctcttcagggaggtttgccagatttgctgatggatctgctgtagcacag
ctgggagaaacctctgtgatggtgaccgctgtgagcaaaaccaaaccttctccgtctcag
ttcatgccgcttgtggtggactaccgacagaaggcggctgctgcaggtcgaatccccacc
aactacctgaggcgagagctgggaaccaccgacaacgagatcctcaccagcagactcatt
gatcggtcaattaggccacttttccctgccggttacttttatgacactcagatcctttgt
aacctgctcgcggttgatggtgtcaatgatccagatgtgctggctattaatgcagcttct
gctgctctggccctgtctgacatcccctggaatggacccataggtgctgtgcgtgtgggc
atgttaaacggagagctgctggtcaaccccaccagagcacagatggcttccagcagcctc
aacatgattgtggctggagctcccagcagtcaagtggtgatgatcgaggcgtcggctgag
aacgtgctgcagcaggacttctgccacgcggtgaaggtggcagtgaaacacaccacacag
atcatactggccatccagcagctggcgcgagagcagaaggtcaccaagcgcacgccggtt
aagatgttctcggcgccggccgacatggtggagcacgttcggaaaatatcttctgagagc
atctatgctgttttcactgactacactcacgataagatttccagggatgaagtgatcaac
aaaattcgactagaaacagaagtggacctaaaagaaaagttcccccaggctgagcccttt
gaagtcattgaatccttcaacaccgtgagcaaagaaatcttccgcagtttagtgcttaat
gagtacaagaggtgtgacgggagggagctgactgctttgaggaacatttcttgcgacgtc
gacctctttaagcctcttcacggctcggctctgtttcagagaggacaaacgcaggtgctg
tgcggcgtcacatttgattccctggagtccagtatcaaagcagatattatcaccacagct
ttaagtggcatcaaagacaaaaacttcatgcttcattatgaattccctccatatgcaacc
aatgagattggaaagatgggaggcctcaacaggagagagctcggacacggagctctggct
gagaagtctctgagaccagtcattcctaaagacttccctttcaccatcagggtcacagct
gaggtgctggagtccaacggatcctcttcaatggcttcagcatgtggaggcagccttgct
cttatggatgcaggtgtgcccatctcttctgctgtggcgggtgtagccatcggcctcatc
tccaaggccaaaccagagacacctgctgagatagaagactacagattactaacagatatt
ctgggaatagaggattaccttggagacatggattttaaattggcaggaacaaacaagggt
atcactgctttacaggctgatgtgaagatccccgggctgcctctgaggatcgtcatggag
gcgatccaacaggccacagtggcaaagagggaaatcttgggcatcatgaacaaatgtatc
gtaaaacccagagagagccggaaagagaacggacctgttgttgaaaatgtgcgggtgccg
gtgtcgaggcgagctcgcttcgtcggtccgggaggttacaaccttcgcaggcttcaagct
caaacaggtgtgacaataagtcaggtggacgaggagacgttttctgtgttcgctccgacg
ccaggagccatgaacgaagcccaggaattcatcagtgagatctgcaaagatgaccaggaa
ctgcagctggagtttggtgccatctacaccgccaccatcacagaaataagggacattggt
gtgatggtgaaactttaccccaacatgagtgccgtcctgctgcacaactcgcagctggac
cacaaacggatcaaacacccaagtgctctgggtttagaggtgggacaggagatacaggtc
aagtactttgggcgggacccaacagacggcagaatgaggctttcgcggaaggtgctccag
tctcccgctgcaactgtcgtcaagatgctgagtgacaaacagagcatctccatgggttta
agcaacagccacacaaacagcaccgaatcgtga
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