Brachyistius frenatus (kelp perch): 138628947
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Entry
138628947 CDS
T10614
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03030
DNA replication
bfre03420
Nucleotide excision repair
bfre03430
Mismatch repair
bfre03440
Homologous recombination
bfre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138628947 (rpa1)
03420 Nucleotide excision repair
138628947 (rpa1)
03430 Mismatch repair
138628947 (rpa1)
03440 Homologous recombination
138628947 (rpa1)
03460 Fanconi anemia pathway
138628947 (rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfre03000
]
138628947 (rpa1)
03032 DNA replication proteins [BR:
bfre03032
]
138628947 (rpa1)
03400 DNA repair and recombination proteins [BR:
bfre03400
]
138628947 (rpa1)
Transcription factors [BR:
bfre03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
138628947 (rpa1)
DNA replication proteins [BR:
bfre03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
138628947 (rpa1)
DNA repair and recombination proteins [BR:
bfre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
138628947 (rpa1)
MMR (mismatch excision repair)
138628947 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
138628947 (rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Pox_vIL-18BP
CDC24_OB3
A_deaminase
Motif
Other DBs
NCBI-GeneID:
138628947
NCBI-ProteinID:
XP_069568456
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MTELSGGAIEALANGSGGNDTVLQMVNIRKIDGGSGPPRFRVMMSDGLHTLSSFMLSTQL
NCMAEENKLTPNCVCILKRHVTNILKDGRRVVIILEIDVIKTAKEVAGRIGDPTPYTEGQ
IKGPQSAAVPEHRPPLVSQNKNDVNRGFNRDFGKKAPSVMPSTPGGSSKVVPIASLNPYQ
SKWTIRARVTNKSSIRTWSNSRGDGKLFSMEIVDESGEIRVTGFNQEVEKFYSLIEAGKV
YYISKASLKIANKQYTSVKNDYEMTLNGESSIIPCDDSGDVPMVQCNFVSIGDLESRDAD
AIIDVIGVCKSVDEVTRITTKTNREVSKRSLNLIDMSGKLVSVTLWGEEAEKFDGSGQPI
VAIKGAKLSDFGGRSLSASFSSTMMINPDIPEAYKLRGWYDKEGYAMDGQSLTEVKGGGG
RGNDTWKALSDVKTEHLGHGDKADYYTCIATIVYLRKENCLYQACPSQDCNKKVVDQQNG
MFRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQDSAEAILGQNSAYMGQLKDSNES
AFDEVFQQANFHTFVFRNRVKLETYNDESRIKATVLDVKPVDHTDYSRRLIMNIRKLGAQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacggaactctctgggggcgcgatagaggctctggccaacggatccggtgggaacgac
acggtgcttcagatggtgaatattcgcaagattgatggaggaagtggtcccccccgcttt
cgggtgatgatgagtgatggtctgcacactctgtcatccttcatgctctccacccagctg
aactgcatggctgaggagaacaagctgaccccgaactgcgtctgcattctgaagaggcat
gtgaccaacatactgaaggatggacgacgagtcgtaatcattttggaaattgacgtcatc
aagactgccaaagaggttgctggtagaatcggagaccctactccgtacactgagggtcag
attaaaggaccgcagtcagctgcagtccctgaacaccggcctccactggtgtcacaaaat
aaaaatgatgtgaacagaggtttcaacagagattttgggaagaaggctccatctgttatg
cccagtactccagggggcagctccaaagtcgtgcccattgccagcctcaacccctaccag
tccaagtggactatccgtgctcgtgtgaccaacaagagcagcatccgaacatggagcaac
tctcggggggatggcaaactcttctccatggagatcgttgatgagagtggagagataaga
gtgactggttttaaccaagaggtggagaagttctacagcctaattgaggctggcaaggtc
tactacatctccaaggcctcgctgaagatcgccaacaagcagtacacatccgtgaagaac
gactatgagatgacactcaacggagagtccagcatcatcccctgtgatgacagtggggat
gttcccatggtgcaatgcaactttgtgtctatcggtgacttggagagcagagatgcagat
gccatcattgacgtgatcggagtgtgcaagagtgtggacgaggtgacccgcatcactacc
aagaccaaccgtgaagtgtcaaagagatctctcaatctgatagacatgtctggaaagctg
gtgagcgtcacactgtggggagaggaggcagaaaagttcgatggttccggacagcccatt
gttgccatcaagggcgcgaagctttcagattttggaggccgctctctctctgcatccttc
agcagcaccatgatgatcaacccagacatccctgaggcatacaagctcagaggctggtat
gacaaggagggctatgctatggatggacagtctctgacggaagtgaaaggtggcggcggg
cgaggaaacgacacctggaaggctctatctgacgtgaagaccgagcatctgggacacgga
gacaaggcagactactacacctgcatagctaccatagtgtacctgcgcaaggaaaattgc
ctttaccaggcctgcccgagccaagactgcaacaaaaaggtggtcgaccagcagaacggc
atgtttcgctgcgagaagtgcgacaaagagttccccaacttcaagtaccgcctcatcctc
tccgccaacattgcggattacggggacaaccagtgggtgacttgcttccaggacagcgct
gaggccatcctgggccaaaactcagcttacatggggcagctcaaggactcgaatgaatct
gccttcgatgaggtcttccagcaagccaactttcacacttttgtcttccgcaacagagtg
aagctggaaacgtataacgatgaatccaggattaaggccaccgtgctggatgtgaagcct
gtggaccacacggactacagcaggaggctgatcatgaacataaggaaactgggtgctcag
tag
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integrated database retrieval system
