Brachyistius frenatus (kelp perch): 138629334
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Entry
138629334 CDS
T10614
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
138629334
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfre04040
]
138629334
Ion channels [BR:
bfre04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138629334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
138629334
NCBI-ProteinID:
XP_069569057
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MENSQPPDQEEPNKSREGQENSLDWLLRKDSAEISPVPMDTNVSISSQSGVSADNICNNA
FTRERVFAAASQGDTTQLDGLLSYLRVNDKRLTSAEFTDDMNGKTALLKALLNLKDGRND
TIKILLDIAEKTADLETLINASYSDPCYKGQTALHVAIERRSFDHVKLLVQKGADVQAKA
NGRFFQRNAGLGFYFGELPLSLAACTNQPDIVSFLMDNPYRRSDLMDRDSQGNTVLHALV
VIADNTTENTDMVAKMYDEILVRQHKLEKKVQLEAIENNQGLTPLKLAAKLGKIGLFRHM
LQREFADEETRPLSRKFTEWVYGPVHSSLYDINSIDTNEDNSALEIIIFGSEIPNRPEML
QVEPLRSLLEDKWKRFASKLFLMNFMVYLIYLVIFTTVAFYRKEGQPPFPIENVPLDYLR
SFGELISVLGAAWFLYKSITIFRRNPPTFKALFTDGFSDILFFLQAAFLLICTVLYACGR
REYVGLLVLSLALAWMNVLHYSRGSKQMGMYNVMMQRMILGDLLHFLCVYGVLLFGFSAA
IVALIDDSTPALKKLTNDTRARGRSFGLEPFKCQKPSYNDIRFTTLELFKFTIGMGDLEF
TDHVQYKEVFYILLICYIVLTYILLLNMLIALMGNTVERISTQSESIWKLQRAVTILDME
RTLPRCLRSKLHSRVPKMVCFRNEQDECRRCFRVEEINWRQWRSDLGGIREEDPGDQMMK
MQPDNKTPGSPWNLNLLRHRIYSRQHQPRQSNIP
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacagccaaccgccggaccaagaggagcctaacaaaagcagggaagggcaggag
aacagcctggattggctgctcaggaaagacagcgcagagataagtcctgtgccgatggac
accaacgtctcaatatcgagtcagagtggtgtgagtgccgacaacatctgcaataatgcg
ttcaccagggagagagtgtttgctgcagcatcccagggagacacaacacaacttgatggg
ctgctttcatacctgagagttaatgataagagactgacgagcgcagaattcacagatgac
atgaacggaaaaacggcgctcctgaaggctttgctgaacctgaaagatggcagaaatgac
accatcaaaatcctccttgacatcgcggagaaaactgcagatttagaaactttgatcaac
gcatcttacagtgatccttgttacaaaggtcagacagctttgcatgtcgccatcgagaga
aggagcttcgaccatgtgaagctgttggtgcagaaaggagcggatgtgcaagccaaagcc
aatgggaggtttttccagcgtaatgcaggactgggcttttattttggggagctccctctg
tctctggccgcctgcaccaaccagcctgacatcgtgtcctttctaatggacaacccttac
agaaggtccgacctgatggacagagactcgcagggaaacactgtgttgcacgcgctggtg
gtcatagcagacaacacgacagagaacacagacatggttgcaaagatgtatgacgaaatc
ctcgttcggcagcacaagcttgagaaaaaagtccagttggaagcgattgaaaataatcaa
ggactgacgcctttgaaattagcagctaaacttggcaagatcgggctgttcagacacatg
ttacagcgggaatttgcggatgaggagacgaggccactgtccaggaagtttacagagtgg
gtctatggacccgttcactcctccctttatgacataaactcgatcgacaccaacgaagac
aactctgcgttggagataatcatcttcgggagtgaaattccgaatcgtcctgagatgctc
caggtcgaacctcttcgcagccttcttgaggacaagtggaagaggtttgcgtccaaatta
ttcttgatgaatttcatggtttatctgatatacttggtcatcttcaccactgtggccttt
tacagaaaggagggacagccgccgtttcccatcgaaaacgtcccacttgactacctccgt
tccttcggtgagctcatcagcgtcctgggagcagcctggtttctctataaatcgataact
attttccggagaaaccccccgaccttcaaggctctgttcacggatggattcagtgacatt
ctgtttttcctacaggcagcgttccttctgatctgcacggttctgtacgcctgcggacgg
agagaatacgtgggactcctggtgctctcgctggctctcgcctggatgaacgtccttcac
tattcgagaggctcgaagcaaatgggaatgtacaatgtcatgatgcaaaggatgatcctg
ggtgacctgttgcactttttatgcgtctatggtgtcttgctgttcggattttctgctgct
atcgtcgctctcatagatgactccacaccagctcttaaaaaactgacgaacgacacacgg
gcgcgaggaaggagtttcggtctggagccgttcaagtgccagaagccgagttacaacgac
atccgattcacgacgctggagctgttcaagttcacaatcgggatgggagatctggagttc
acggaccacgttcagtacaaggaagtcttctacatcttgctcatctgctacatcgttctc
acgtacatcctgctgctcaacatgctcatcgctctgatgggcaacacggtcgaaagaatc
tccacacaaagtgaatccatctggaagctgcagagggccgttaccattctggacatggag
aggactctgccgcggtgtctgaggagtaagctgcactccagagtgcccaagatggtgtgc
ttccgaaacgagcaggacgagtgtcgacgatgtttccgggtggaggaaattaactggaga
cagtggaggtcagatctcggtggaatcagggaggaagaccctggagatcagatgatgaag
atgcagcccgataacaagacccccgggtctccgtggaacctaaatctgctccggcacagg
atttattccagacagcaccaaccacggcagtccaacatcccttag
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