Brachyistius frenatus (kelp perch): 138629828
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Entry
138629828 CDS
T10614
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138629828 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138629828 (exosc2)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138629828 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
138629828 (exosc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
138629828
NCBI-ProteinID:
XP_069569888
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MAADMRLPTVRKTVSLSAFDADRRDLVVPGDVITSDTGFMRGHGTYVDEDKLTASVAGEV
HRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPGQQEEEAGGFYTSLEPVSLSDREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSLQHQVKDILKPEVTEEIVMLTQQKLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagatatgagattaccgactgtccgaaaaacggtgtcgctatcagcctttgat
gctgaccgaagagacctggtggtccccggtgacgtcatcacttcagacaccggcttcatg
aggggtcacggcacctacgtggatgaggacaagctgacggcttcggtcgctggagaggtg
cacagggtcgacaaactcatctgtgtccgaccgctgaaaaccaggtttaacggcgaggtc
ggagatgtcgtggttggcagaatcacagaggtgcagcagaaacggtggaaggtggagacc
aactcccggctggactccgtcctcttgttgtcgtctgtcaacctgcccggaggagagctg
aggagaagatcagcggaggatgagctcaccatgcgagaataccttcaggagggcgatctg
atcagcgcggaggtgcagtcggtcttctcagacggagctctgtcacttcacacccgcagt
ttaaagtatggaaaactgggtcaaggagtgctggtgcaactctccccttcgctgatcaag
aggcagaaaacacatttccacaacctgccatgcggtgcgtccatcattcttgggaataac
ggcttcgtgtggttgtatccaacaccgggacagcaggaggaggaagctgggggcttctac
accagtctggagcctgtcagcctgtcagatcgagaggtgatttcacggttgagaaactgc
ctgctggctttggctgcacacaaggtccttttgtacgacaccagcgttctctattgctac
gaatcttcccttcagcaccaggtcaaggacatcttgaaaccagaggtgacggaggagatt
gtaatgttgacgcaacagaagctgttggaacaggaaggttaa
DBGET
integrated database retrieval system
