Brachyistius frenatus (kelp perch): 138629880
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Entry
138629880 CDS
T10614
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
138629880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfre04121
]
138629880
Enzymes [BR:
bfre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138629880
Ubiquitin system [BR:
bfre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138629880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-B_box
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-RING_5
ANCHR-like_BBOX
RING_XB3-XBAT31
ACR_tran
KwaB
Motif
Other DBs
NCBI-GeneID:
138629880
NCBI-ProteinID:
XP_069569962
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MAELCESLLGLEDELTCSICLGTFVCPVTIPCGHNFCQLCLLATWTDTYSCPQCRTLFAT
KPELKKNTVLSTVVETFNLRSNKSEASLLGEETATEKKTERVIRCDTCMEAKAAQTCLTC
MASFCDEHLRPHRENPVFRLHQLGDPVGDLSERICPDHHKLMELFCSQHSRPICSLCLQQ
THKGCSFTSPEEQRTLKECGLRSALKMLNGKITKNESVVTQMRDMQNKLKDSATYRKKAM
MTAFQQMQNMLAQEESDAMNAVDCEVETGQTKLRLLEKRFSENIETMSKAKEDIHSMLSQ
SQTLAFLQTSFTLPEAVNFDPYTPRINLDSKKVMATQIFVANLKDYLAAILKQPMESRVP
LLKPGEGAACDLGFPPSSSASPQESAPQVKTGSKKKPQKTKKPPKSNEALMGNKNLGRLM
ENLLEFGAMDISRDCPPVAEAKPKPGTSDISPNITSAEKRSELLKFGTVLTFNPRTAHRR
ITLSEGFTKASVSDEHANYPECPERFSVCSQVLAGKGFSRGRHYWEVRMSSNNFVGIGLA
YGGIDRKGPTSRLGRNALSWCIEWFNVKLSAWHNSSETVLVNPNPKRIGVLLDCEGGMAT
FYSVGDRAYPFHSFVIPGGVAAIYPAFWIFSSGSSISFCKLQA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggccgaactgtgcgagtcattgctgggtctggaggatgagctcacctgcagcatctgt
ctcggtacctttgtctgtccggtgaccatcccctgcggacacaacttctgccagctgtgc
ctgctcgccacttggacggacacctacagctgcccccagtgtcggaccctcttcgccacc
aaaccggaactgaagaagaacacggtcctcagcaccgtcgtggagaccttcaacctgagg
tcgaacaagagcgaagccagcctgttgggagaagaaaccgcaacagagaagaagactgag
cgcgtcatacgctgcgatacgtgtatggaagcgaaagcggcgcagacctgcctcacctgc
atggcctctttctgcgacgagcacctgcgccctcaccgggagaaccccgtgttccgcctc
caccagctgggtgatcccgtcggggacctgtcggagcgcatctgccccgaccaccacaag
ctgatggagctcttctgcagccagcacagccgtccgatctgcagcctctgcctgcagcag
acccacaaaggttgcagcttcacgtcccccgaggagcagaggaccctgaaagagtgcggc
ctgagaagcgcgttaaagatgctgaatgggaagattacgaaaaatgaatctgtcgtaacg
cagatgagggacatgcagaacaagttaaaggactccgcgacctacaggaagaaagccatg
atgactgccttccagcagatgcagaacatgttggcccaggaggagagcgacgccatgaac
gcggtggactgcgaggtggagacgggccagactaaactcaggctgctcgagaagaggttc
agcgagaacatcgagaccatgagcaaagctaaagaagacatccacagcatgctgagtcag
tcccagacgctggccttcctgcagacttcattcaccctccctgaagccgtaaactttgac
ccttacacccctcgaatcaacctcgactccaaaaaggtgatggcaacacagatctttgtt
gctaacctgaaggactatctggcggcgatcctcaaacagcccatggagtccagagtaccg
ttgcttaaaccaggtgaaggagcagcttgtgacttggggtttccaccttcgagctctgca
agcccacaggaatctgctcctcaggttaaaacgggctcgaagaagaaacctcagaaaacc
aaaaagcctcccaagtccaacgaagcccttatgggaaacaagaatttaggccgtttgatg
gaaaacctgttggagttcggtgcgatggacatctccagagactgtcctcctgtagctgaa
gccaaaccgaaaccaggaacttcggacatttccccaaacataacttctgcggaaaaaaga
tctgagcttctgaaatttggcacggtactcacttttaatccgaggacggcccatagacgc
atcacgctgagcgagggcttcacgaaggcctccgtgtcggatgagcacgcaaactacccc
gagtgcccggagcgcttttccgtctgctcccaagtgctcgctggcaagggtttctccaga
gggcgccactactgggaagtccgaatgagcagcaacaacttcgtcggcatcggcttggct
tacggcggcatcgaccgcaaaggccccaccagtcggctgggccgcaacgccctgtcctgg
tgcatcgagtggtttaacgtcaagctttcggcctggcataacagcagtgagaccgtgctg
gtcaatcccaatccgaagcgcataggcgtgctgttggattgcgagggcggtatggctacg
ttctacagcgtgggcgaccgggcgtatcccttccactccttcgtgatccccggtggtgtc
gccgccatctatccagctttctggattttctcaagcggctcttccatttctttttgcaag
ctgcaggcgtga
DBGET
integrated database retrieval system
