Brachyistius frenatus (kelp perch): 138629991
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Entry
138629991 CDS
T10614
Symbol
helz
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
138629991 (helz)
3'-5' decay
Other 3'-5' decay factors
138629991 (helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138629991
NCBI-ProteinID:
XP_069570161
LinkDB
All DBs
Position
Unknown
AA seq
2141 aa
AA seq
DB search
MADRRAEKSCEEASRSLARREYEAAVSHSTDALVVLAPPSSSAPVPPSPPSLVAAAGPLR
SRALLYRIAAFLQLKNYDEADEDCKHVLAEEIARGDGSLQASLRSMLLDGSLQEVANILS
KALYGEPMNGIVAKDLTRLKMLFSEIEAVNREMAPEYTDEPDEEVQDGWQFRPPPRGVTS
SEEYTLCKRYLEQGLCRYGAQCTSAHSQEELMEWQKRYASRLIRLKQQQESKHFTENYME
TLIEKWMNSLSPEKVLSDSLEGVNVETSSSLSVTVTSKRSSHSWIFSLLCKPARKLYRIA
LLYDAHRPHFFITGVSAEERLQVVPKSCQEWTPGEETPVTVDNGLDHCVYKVAVGFSTEI
FGTFRQTIVFDFGSEPVLMQRIMVDAASIEDLEHLLAARQQLLMTAKRWDSSCKTIVEFC
PNETMAEMERGLLSRYHIPLSADQLFTQSVLDKTLTKDNYQARLHDLLYIEEIAQYKEVS
KFNIKVNLQLVNSFMLTGISVGAKYAQNGQLFARFRLTETLSEDTLAGRLVMTKVNSVLL
LPLGREGVSSQPPPGVKERVYEAVIEEKTKDYIFLRICKDCCQELGLQSDRELQVELQFQ
LNRLPLCEMHYALDRIRENNILFPDASLVPTIPWSPNSTSADPLGVTDPLLKTSGLKQHI
SVLRQWDEQLDPRLNAKQKEAILAITTPITMSLPPILIIGPYGTGKTFTLAQAVKHILRQ
EQSRVLICTHSNSAADLYIKDYLHPYVEAGNPHARPLRVYFRNRWVKTVHPVVQQYCLIS
STHITFQMPTREDILRHRVVVVTLSTSQYLCQLDLEPGLFSHILLDEAAQAMECETIMPF
ALASKTTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPPEFPCRILLCENYRS
HEAIINYTSELFYDGKLMASGKQPSHKDFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIV
ERVEELRKKWPVAWGKLDDGSIGVVSPYADQVFRIRAELRKKRMHEVSVERVLNVQGKQF
RVLFLSTVRTRHTCKHKQTAIKRKEQLIEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVV
GDPIALCSVGRCRKFWEHFISICHENSSLHGITFEQIKAQLEALELKKTYVLNPLAPEFI
PRALRPMQGHHSSSQALHPHHHPHPQHAQPAPNKQGPQQQQQQQQQQQQQQQQQSPPKGK
HTNHTEHLPPEGYVQPNPAVLMGNPIRAFTPPLGGTPAGMGKSPSPVQRIDPHTGASILY
VPAVYGGNMVMSMPLPLPWPGYQNRFAVDPRIMSHPAAMAYNFNLLQAQNRGSPIPYSGV
AHPSPLGMGQPSPDKELQADPIRNGKLEGCPKSEQNRLQTPERKNTDMKEKQGDLDTGQS
RSLDSQTEGLVGFPNTLLHRKDPSAAQRPLNYHLAPPNPAFPPHPAAGRTFPQQYPVSRL
PYRVGQPQHPGMAQQSQQLSPAYTGGSHNASFFSGPIPAHRSVQSPTLDGPEAGGVEEMS
GTIRTPMGHPAGHHPGLSQHNRVSSFGEDGQDGNLGDGLDLQGPLALEALSQQQQAARLG
QWGEAAGPFLQGGVAFPLPQQLAHLAQPGVARFPHQLLRAASWGLGANMDDEIVPPASSG
PAFTRYPGLLREMVPQEQPDPREAAEMQPPPQSRLLQYRQSQSRASGDPSSSLAAISNHA
GPFPSGLYSHDAGRELLNDNLLNNQALQQQQQQQQQHPGNPLYNTGSYPHQPPAHPASPP
PSQVKYLLQEAQWSHGGTASVSPPQQNHLLGNQGHGLPYGLPIMAHPSRQEQVHLMQLHH
QHQQQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHHQQNQGPDQESYHPLSPRTS
AATALHNVDEYEPRGPGRPLYQRRISSTYPDESSPASTHNALSQQSQQSQPCTSDSQDHP
HPHIQHHQHPHAPYGYPPHDHLWPSNGGGPASFQNIPCNGAGTLVQHRELLASKGLRQTE
EQVKSEVTAAQQTHPHSLNSLQHQFPPLMPKNKQQQPPPPPQQPQQQQQQQQQQPPPPPP
QQQQQQQQQQQQQQQPPQQQQQQQQPPPPPPPPQAPTEPSQGAPNLSKPPTMSYASALRA
PPKPRAVRPEQVKKNSDPLSLLQELSIGSSNGSNGYYSYFK
NT seq
6426 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggagagcggagaagtcatgtgaagaagccagcagatcgttagccaggcgg
gagtacgaggcggcagtcagccacagcacggacgccctggtggtccttgcacccccatca
tccagtgcccctgtcccaccgagccccccatccctcgtggccgccgccggacccctccgc
agccgtgccctgctctaccgaattgctgccttcttgcagctgaaaaactatgatgaagca
gatgaagactgcaaacatgtcctggcagaagaaattgccaggggagatggatcacttcag
gccagcttgcgttccatgttgttggatggcagcctgcaggaggtggccaacatcctatct
aaagccttgtatggagagccaatgaatggaattgttgcaaaagacctcaccagattaaaa
atgctcttctcagaaatagaggctgttaatagggagatggcaccagaatacacagatgag
ccggatgaagaggtccaagatggctggcagttccggcctcctcccagaggagtcaccagc
agtgaggagtacaccctctgtaaaaggtacctggagcagggtctgtgtcggtacggggcc
cagtgcacgtcggcgcactcgcaggaggagctgatggagtggcagaagcgctacgcgtca
cgcctcatccgcctcaaacagcagcaggagagcaagcacttcaccgagaactacatggag
accctaatagagaagtggatgaattccctctccccagagaaagtgctaagtgacagttta
gaaggagtgaatgtagagaccagctccagcctctctgttaccgtcacctccaaaagatcc
tcccactcctggatcttctccttgttgtgcaagccggccagaaagctgtaccgcatcgcc
ctgctgtacgatgcccacagaccacacttcttcatcacaggcgtgtcagctgaggagcgc
ctccaagtagtccccaagagctgccaggagtggaccccaggagaggaaactccagtgaca
gtagacaatggcctggaccattgtgtctacaaggtcgcagtgggcttcagcacagagatc
tttggtaccttcagacagaccattgtctttgacttcggctcagaacctgtgctgatgcag
cggatcatggtggacgctgcctctattgaagaccttgaacacctgctggcagccaggcag
cagctcttgatgacagcgaagcgctgggattcttcgtgcaagaccatcgtagaattctgt
cccaatgagacgatggccgaaatggagcgcggtctcctatcccgctatcacatccctctg
tcagccgaccagctcttcacccagtcagtcctggataagaccctgaccaaagacaactac
caggcccgactgcatgacctgctctacatagaggagattgcacaatataaggaagttagc
aagtttaacatcaaggtgaatctgcagctggtcaatagctttatgctgactggcatttct
gtcggagccaagtatgcccagaatggacagctctttgcacgcttcagactcactgaaaca
ctctctgaggacacactggccgggcggcttgtgatgacaaaagtaaattcagtcctgctg
ctgccgctgggccgtgagggggtcagcagccagccacctcctggggtcaaagagcgtgtt
tatgaggctgtgattgaggagaaaaccaaggactacatcttcctgaggatctgcaaggac
tgctgtcaggagttggggctacagtctgacagagaattacaggtggagctccagttccag
ttgaacagactgccactctgcgagatgcactacgccctggatcgcatcagagaaaacaac
atccttttccctgatgctagcctggtccccaccatcccctggagccccaacagtacctcc
gcggaccccctaggggtcacggaccccctgttgaagacctctggtttaaagcaacacatc
tcggttttgaggcagtgggacgagcagctggatccccgtctaaatgccaagcagaaggag
gccatcctggccatcaccacacccatcacaatgtccttacccccaatcctcatcattggt
ccctatggtaccggcaagaccttcaccctggcccaggctgtcaagcacatccttcgccag
gaacagagcagggtcctgatctgcacccactccaacagtgcggctgacctttacattaag
gactaccttcatccgtatgttgaagcaggcaatcctcatgccagacctctcagggtatac
ttcaggaaccgctgggtgaagacggtccacccagtggtccagcagtactgtctgatctcc
agcacacacatcacttttcagatgcccacaagggaggacatcctcaggcaccgcgtggtg
gtggtcaccctcagcacctcccagtacctctgccagcttgacttggagcctgggttgttc
agtcatatcctgctggatgaagcagcccaggccatggagtgtgaaaccatcatgcctttt
gctctagctagcaagaccacccgcatcgtgctggctggagaccacatgcagctcagtcca
tttgtgtacagcgagtttgcacgggagcgtaacctgcacgtgtcgcttctggaccgactg
tatgagcattacccccctgagttcccctgtcgcatcctgctgtgcgagaactaccgctcc
cacgaagctatcatcaactacacgtcagaattgttttatgatggaaagctcatggcaagt
gggaagcagccctcccataaggacttctaccctctgaccttcttcacagccagaggagaa
gatgtccaggagaagaatagcactgcctactacaacaatgctgaggtgtttgagattgtg
gaacgggtggaggagttgcgcaagaagtggccggtggcctggggtaaactggatgacggg
agcatcggggtggtgtcaccgtacgccgaccaggtgttccgcattcgtgctgagctccga
aagaagaggatgcatgaggtcagcgtggagagagtgctcaatgtccaaggtaaacagttc
cgggtgctgttcctcagcacggtgcgcacacgacacacctgcaagcacaagcagacggcc
atcaagcgtaaagagcagctgattgaggactcgacggaagacctcgactacggcttccta
tccaactacaagctgctcaacacggccatcaccagagctcagtccctggttgcagttgtg
ggagaccccatagcactgtgctctgtagggcggtgcagaaaattctgggagcactttatt
tccatctgccacgaaaactcgagcctacatgggatcacctttgagcagatcaaggctcag
ctggaggcactagagctgaagaaaacctacgtcctcaacccactggccccggagttcatc
ccacgagccctcaggccaatgcaaggacaccactcgtcttcgcaggccctccatccgcac
catcacccacatcctcagcatgcacagcctgcccccaacaagcagggtccacagcaacaa
caacaacaacaacagcagcagcagcagcagcagcagcagcagtcaccccctaagggaaaa
cataccaaccacacagagcaccttccacctgaaggatatgtccaacccaacccagctgtg
ttgatgggaaaccctattcgggcattcacaccacctttgggtggcacaccagctggtatg
ggcaagtcgcccagtcctgtgcagaggatcgatcctcatacaggtgccagtatcctctac
gttccagctgtgtatggtggaaacatggtcatgtccatgcccctgcctctgccttggcca
ggttaccagaatcgctttgccgtggatcctcgcatcatgagtcacccagcagccatggcc
tacaacttcaacctgttgcaggcacagaatcgaggctcccccattccttacagtggagtg
gcacacccctcccctctgggaatgggccagcccagtcctgacaaggagctgcaggctgat
cccatcagaaatggtaaattagaaggatgtccaaagtcagagcagaaccgtctccagacc
ccagaaagaaaaaacacagacatgaaggaaaaacagggagatttagacacaggccaaagt
cgaagtctggattcacagaccgaagggctggttggatttcccaacacgctgctccatcga
aaagacccctcagctgcccaaagacccctcaactaccacctggcaccacccaacccagct
tttcctccgcatcccgccgctggaagaaccttcccccaacagtatccagtctctcggctc
ccttatcgggtcggccagcctcaacacccagggatggcccaacagagtcagcagctcagt
cctgcctacacgggtggaagccacaacgcttccttcttcagtggccccattcccgctcac
agatctgtccagtcgcctactttggatgggccggaggctggaggggtggaggagatgagt
ggcaccattaggactccaatgggccacccagcaggccaccacccaggcctgtcacagcat
aacagggtcagcagctttggggaggacggacaagatggaaacctgggagatggtttggac
ctccagggtcccttggctctagaggccctgagccagcagcagcaggcagcgaggttaggc
cagtggggggaggcagcaggccctttcctccagggcggcgtcgcctttcctctgccccaa
cagctcgcccacctcgctcagcccggcgtggctcgcttcccccatcagctgctccgggca
gctagctggggcctcggtgccaatatggatgatgaaattgttcctcctgcctcttctgga
ccagccttcaccaggtacccaggcctcttgagagagatggtcccacaggagcagcctgat
cccagggaagcagctgagatgcagcccccacctcagtctcgtctcctccagtaccgccag
tcccagtcccgtgcctcaggtgacccttcatcctctttagccgccatctccaatcatgcc
ggcccttttccatcaggactctactcccacgacgcaggtcgcgagctccttaacgacaac
cttctcaacaaccaagccctgcagcagcagcagcagcagcagcagcagcacccggggaac
cccctgtacaacactggtagctacccacatcagccaccagctcaccctgccagccctcct
ccctcccaggtcaaataccttctgcaagaggcccagtggtcccacggtggaactgcatct
gtgagcccaccacagcagaaccacctgttagggaaccagggccacgggcttccttatgga
ctgcccatcatggctcatcccagcaggcaggagcaagtccacctgatgcaacttcaccat
cagcaccagcagcagcagcaacatcaacaacagcagcagcagcagcagcaacaacaacaa
caacaacaacaacaacaacaacaacagcagcagcagcagcaacaacaacaacaacaacat
caccaacaaaatcaaggtccagaccaggaatcctaccatccactgtcccccagaacatca
gcagccacagcccttcacaatgtagatgagtatgaacccagaggccccggtcggcctctc
tatcagcgccgcatctcctccacgtacccagacgaatcatctccagccagcactcacaac
gccctgtcccagcagtcccagcagtcccagccctgcacgtcagactcccaggaccacccg
catccacacatacagcatcatcaacacccacatgctccatacggttatcccccacatgac
cacctctggcccagtaacggcggaggtcccgcttcgtttcagaacattccatgtaacgga
gccggcacactcgttcagcatcgggagcttctggcttccaagggcctccgtcagacagag
gagcaggtaaagtccgaggtcacagcagcacagcagacgcacccacactccctcaactcc
cttcagcaccagtttcctcctctcatgcccaagaacaagcagcagcagccgccgccgccg
ccgcagcagccgcagcagcagcagcagcagcagcagcagcagccgccgccgccgccgccg
cagcaacagcagcaacaacaacaacaacaacaacagcagcagcagccgccgcaacagcag
cagcagcagcagcagccgccgccgccacctccgccaccacaggctcccacagagcccagc
cagggggctccgaatttaagcaagccacccaccatgtcctacgcgagcgccctccgcgct
ccacccaagccccgggctgttcggcctgaacaggtcaaaaagaacagcgaccctctctcc
ctcctacaagagctgagtataggaagttcaaacggtagcaatgggtactattcctacttt
aaatga
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integrated database retrieval system
