Brachyistius frenatus (kelp perch): 138630546
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Entry
138630546 CDS
T10614
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04137
Mitophagy - animal
bfre04140
Autophagy - animal
bfre04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138630546 (hif1aa)
04137 Mitophagy - animal
138630546 (hif1aa)
04148 Efferocytosis
138630546 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfre03000
]
138630546 (hif1aa)
Transcription factors [BR:
bfre03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
138630546 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Spore_coat_CotO
Motif
Other DBs
NCBI-GeneID:
138630546
NCBI-ProteinID:
XP_069571063
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MDAGIVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAQELPLPHTVSSSLDKASIMR
LTISYLRLRKLLNTDEPMAAEETELDDQLNNSYLKALEGFLMVLSEDGDMIYLTENVNKC
LGLAQFDLTGQSVFDFIHPCDQEELREMLVHRTGSKKVKGPNRERSFFLRMKCTLTSRGR
TVNVKSATWKVLQCSGHVRVYDRQTEQTTNGHKEPPVPYLVLICDPIPHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYDPEELLNRSVYEYYHALDSDHLTKTHQNLFAKGQV
STGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLILSLEQTEDV
KPVKEEKREEEKVAVESSQPDVTPAMQTEEEEEEEEEKKEEELEKELEEEEEEKVPELDV
IKLFTHVVDAQPLVSLYDQLKEEPEALTLLAPAAGDTIISLDFSCPDSEIQLPKDAPLYN
DVMLPSTSEKLILPLSPLPPSEPLHASNTASEEAKSESYAPAPSTATTSHSPPEVDFCFP
MDSEMNSDFKLESVEKLFAIDTEPKTLFNTQTMEDLDLEMLAPYIPMDDDFQLRSLTPEE
PLSCEPVKSMECSPVHMTQDVDSFPSSPFSAPSSSAASPAPAEPVNAPHPATIAVNSAPQ
LNKDVSLRTLAAQNAQRKRKLCDLKEIIGQGKKVKAPESGTTRTILLLPSDLASRLLGST
SEDTGSLFSLPQLTRYDCEVNAPLQGRQYLLQGEELLCALDHVN
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaggaattgtacccgaaaagaaaagggtgagctcggagcggaggaaggagaag
tcgagggatgcagcacgatgccggcgtgggaaggagtcggaggttttctacgagctggcg
caggagctgccactgccccacactgtcagctccagcctggacaaggcctccatcatgagg
ctcaccatcagctacctgcgcctgagaaaactgctgaacactgacgagccaatggcagcg
gaggaaacggagctcgacgaccagctaaacaactcctatctaaaggcgctggagggtttt
ctcatggtgctgtctgaagacggagatatgatctatctcaccgagaatgtcaacaagtgt
ctcgggctggcacagtttgacctgactggacaaagtgtgtttgacttcatacatccctgt
gaccaggaggagctgcgggaaatgctggtccacagaacaggctccaagaaagtcaaaggg
ccaaatcgagagcgaagcttctttctccgaatgaaatgcactctcacgagcaggggacgc
accgtcaacgtcaagtccgctacgtggaaggtgcttcagtgctcaggtcatgtccgtgtt
tatgaccgccaaactgagcagactaccaacgggcacaaggagccacccgtcccgtacctg
gtgttgatctgtgaccccatcccacacccctccaacatcgaggtccctctggacaccaag
acctttctcagccgccacacaatggacatgaagttcacgtattgtgacgagaggatcact
gagctcatgggttatgatccagaggaactgttgaatcgttctgtgtacgagtactatcat
gctcttgactcggaccatcttaccaagactcaccaaaacttgtttgcaaagggccaggtc
agcacaggccagtaccggatgttggccaagagaggaggctttgtatgggtggaaacgcag
gccaccgtcatctacaacaacaagaactcccagccacagtgtgttgtctgtgtcaacttt
gtgctcagtggcatccaggaggagaaactgatcctgtctctggagcagaccgaggacgtg
aagccggtgaaggaggagaaacgggaggaagaaaaggtcgcagtcgagagcagccagccc
gacgtgactccagccatgcagacggaggaggaggaggaggaggaggaggagaagaaggag
gaggagttggagaaggagttggaggaagaggaggaggagaaggtacccgagctggatgtg
atcaaactctttacccacgtggtggatgcccagccgctggttagcctgtacgatcagcta
aaggaagagcccgaggccctcacgctgctggccccggctgctggagacaccatcatctct
ctggacttcagctgccctgattcagagatccagctgccgaaggatgcaccactctataat
gacgtaatgctgccctccaccagtgaaaagctgattctgcctctttcacctctgccgccc
agcgagcctctccacgcctccaacaccgcctctgaggaagccaaatcagagagctacgct
ccagccccgtccaccgcaaccaccagccacagtcccccagaggtggacttttgtttcccc
atggattcggaaatgaactccgattttaaactagaatctgtggagaagctgtttgccatt
gatacagagcccaaaaccctcttcaacacacagacgatggaagatttggatctggagatg
ttggctccctacatccccatggacgatgactttcagctgcgcagcctgaccccagaggag
cctctgtcttgtgaaccagtcaaatccatggaatgttctccagtccacatgacacaggac
gtggacagctttcccagctcccccttcagcgcgccaagcagcagcgcagcttccccggca
ccggccgagcccgtgaacgcccctcatcctgccaccatcgccgtgaacagcgctccacag
ttgaacaaagacgtctcactcaggacgctggcagctcagaacgcacagcgcaaaagaaaa
ctgtgcgacctaaaagagatcattggacagggcaaaaaggtgaaggcgccggagtccggg
acaaccaggaccatccttctactgccttcagatttggcgagtcggctgctcggcagcacc
tccgaggacaccggttccctcttctccctgccgcagctcacccgctacgactgcgaggtg
aacgcccccttacagggtcgtcagtacttgctgcagggggaggagctgctgtgtgctctg
gaccacgtcaactga
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