Entry |
|
Symbol |
thbs4b
|
Name |
(RefSeq) thrombospondin-4-B
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KO |
|
Organism |
bfre Brachyistius frenatus (kelp perch)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:bfre00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138630986 (thbs4b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
138630986 (thbs4b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
138630986 (thbs4b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138630986 (thbs4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:bfre04131]
138630986 (thbs4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:bfre04147]
138630986 (thbs4b)
00536 Glycosaminoglycan binding proteins [BR:bfre00536]
138630986 (thbs4b)
Membrane trafficking [BR:bfre04131]
Endocytosis
Phagocytosis
Opsonins
138630986 (thbs4b)
Exosome [BR:bfre04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
138630986 (thbs4b)
Exosomal proteins of colorectal cancer cells
138630986 (thbs4b)
Exosomal proteins of bladder cancer cells
138630986 (thbs4b)
Glycosaminoglycan binding proteins [BR:bfre00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
138630986 (thbs4b)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
Unknown
|
AA seq |
940 aa
MGVWTALILASQLLLKLCLRVEAQALVYDLLTSPDCLPDLLQGGLIGQGVNEAFILASFK
LQPKTGTTVFGLYNPRDNSKYFEFTVMGKLNRAVLRYLRSDKRMSSVTFNNLVLADGQQH
RLLFHLKGMQQQGPGEVELHLDCRLVDTVRDLPAAFQGLPTGYGMVELKTMQAREQEGLN
ELKLVVGDSFENVASLQDCHFQQRDAVQTLGVNTKQLSNQMLELTKVIIELKDVVIRQVK
ETDFLRNTISECQACGLGGTEVVKPRCAPGVCFREDICIETANGVECGQCPQGYTGDGFS
CDDVDECQFNPCYPGVKCVNIAPGFRCDVCPLGFTGMPVEGVGVLFAQTNKQVCDDIDEC
KAADNGGCTANSICHNSVGSYQCGSCKSGFTGDQVKGCKPEISCGNSLTNPCDINAQCMV
ERDGSVSCQCGIGWAGNGYLCGKDTDIDGYPDEKLKCKDASCRKDNCIFVPNSGQEDADR
NGQGDACDPDADGDGILNEQDNCWLKPNLDQRNSDKDSHGDACDNCRMVENPDQRDTDED
GKGDACDDDMDGDGLKNFLDNCQRVQNRDQLDRDRDGVGDACDSCPDIPNPNQSDIDNDL
VGDSCDTNQDSDGDGHQDTKDNCPLVINSSQLDTDKDGLGDECDDDDDNDGIPDTLPPGP
DNCRLVPNPDQIDDNNDGVGDICESDFDQDKVIDRIDNCPENAEVTLTDFRAYQTVVLDP
EGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIF
GYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSQSGPGEHLRNSLWHTGDTN
DQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRARFYEGTELVADSGVTIDTTMRGGR
LGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSTQHGVDSL |
NT seq |
2823 nt +upstreamnt +downstreamnt
atgggtgtgtggacagccctaattctggcctcgcagctgctactaaaactgtgcttacgc
gtggaagctcaggctttggtctatgatctgctcacctcgcctgattgcctgccagacctg
ctgcagggcggtctgatcggccaaggggtgaatgaggcttttatcctcgcctccttcaag
ttgcagcccaaaaccggaaccactgtgtttggactgtacaaccccagggacaacagcaag
tactttgagttcactgtgatggggaagctcaacagagctgtgctacgctacctgcggagt
gacaagaggatgagctctgttaccttcaacaacctggtgttggcagacggccaacaacac
cgcctgttgttccacctgaaagggatgcagcagcaggggccaggtgaggtggagctgcat
ctggactgcaggctggtggacacagtccgagatcttcctgccgccttccagggcctgcca
acaggctatggtatggtggagctaaagaccatgcaagccagagagcaggagggtttaaat
gagctaaagctggtggtcggggactcatttgagaatgttgcttcattacaagactgccat
ttccagcaaagagatgctgtccaaactctgggggtcaacacaaagcagctgtccaatcaa
atgcttgagttaacgaaggtgataattgagctgaaagacgtcgtcattcggcaggttaaa
gaaaccgactttctcagaaacaccatctcagagtgtcaggcctgcggtctgggtggtact
gaggtggtgaaaccaaggtgtgccccaggtgtctgttttcgtgaagacatctgtatagag
acagcgaacggtgttgaatgtggacagtgtcctcaagggtacaccggggacggtttcagc
tgtgatgatgtggacgagtgccagtttaacccctgctacccgggagtgaagtgcgtgaac
atcgccccgggctttcgctgtgatgtctgtccgctgggcttcaccggcatgccagtggag
ggtgtgggtgttttgtttgcacagaccaacaaacaggtctgcgacgacattgacgaatgc
aaagcagccgacaacggaggctgtactgcaaactcaatctgtcacaactctgtgggctcc
tatcaatgcggcagctgtaagtctggtttcacaggagatcaggtgaagggatgtaagcca
gagatcagctgtggcaacagcctgaccaacccctgtgatatcaacgcccagtgtatggtg
gaacgagacgggtccgtctcctgtcagtgtggaattggctgggccggtaatggatacctg
tgcgggaaggataccgacattgatggatatccagatgagaagctcaaatgcaaggacgca
agctgtagaaaggataactgcatcttcgttcctaactctggtcaagaggatgccgacagg
aacggtcagggagacgcctgtgatcccgatgcagatggtgacggtattcttaatgagcag
gacaactgctggttgaagcccaacctggaccagaggaacagtgataaagacagccacggc
gacgcctgcgataactgccgcatggtggagaaccccgaccagagggacaccgacgaagac
ggcaaaggggacgcctgtgatgacgacatggatggagatggtctgaagaacttcctggac
aactgccagcgtgtccagaacagagaccagctggaccgagacagagacggagtgggagac
gcctgcgacagctgccccgacatcccaaacccaaaccagtctgatattgacaacgacctg
gttggcgactcctgtgacacaaaccaagacagcgatggcgatggtcaccaggataccaag
gataactgcccgctcgtgatcaatagctctcagctggacaccgacaaagacgggctcggg
gacgagtgcgacgatgacgacgacaacgatggcatccctgacactttaccgccgggacca
gacaactgccggctggtaccgaacccggaccagattgatgacaacaatgatggtgttgga
gatatttgtgagtctgactttgaccaggacaaagtgatcgacaggatcgacaactgccct
gagaatgcagaggttaccttgaccgacttcagggcctatcagacggtggtgctggaccct
gagggcgacgcccagatcgatcccaactgggttgttttgaaccagggaatggaaattgtt
cagaccatgaatagtgacccaggacttgctgttggttacactgctttcagcggagtagac
tttgaggggacgtttcacgtgaatacagttactgacgacgactacgccggcttcatcttt
ggctaccaggactcatcgtccttctacgtggtgatgtggaagcagaccgaacagacctac
tggcaggcgacacccttcagagctgtggccgagcccggcatccagcttaaggctgtgaag
tctcaatcaggccccggggagcacttgagaaactcactgtggcacacgggagacaccaac
gaccaggtgcgtctgctgtggaaggacccacgaaacgtgggctggaaggacaaggtgtcc
taccgctggtacctgcagcaccgcccacaggttggatacatcagagcacgtttttatgag
ggaactgagctggttgcagactccggtgtgactatcgacacgaccatgagaggaggacga
ctcggcgtgttctgtttctctcaagaaaacatcatctggtccaatttgaaataccgctgc
aacgacaccatcccagaggatttccaggagttcagcactcagcacggcgttgactcactc
taa |