Brachyistius frenatus (kelp perch): 138631194
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Entry
138631194 CDS
T10614
Name
(RefSeq) aggrecan core protein-like
KO
K06792
aggrecan 1
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
Proteoglycans [BR:
bfre00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
138631194
Glycosaminoglycan binding proteins [BR:
bfre00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
138631194
Lectins [BR:
bfre04091
]
C-Type lectins
Lecticans
138631194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138631194
NCBI-ProteinID:
XP_069572101
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Position
Unknown
AA seq
1833 aa
AA seq
DB search
MTRWSVLLSVCLSVVTATFDFVYDAHSYMDPEDVLSVSVPLEEPQRPLLGGDVVLPCYFE
DHTVPDPGAPAVVPLSHRIKWSLVTAERVSTVLVALEGQVHVGESYLDRVHLLGYPDTPT
DASIRITELRSGDAGAYRCEVQLGIEDDSDVVRVQVRGIVFHYRSVAGRYSLSFEAAAAA
CGQNSAVVASPEQLQAAFHDGFHQCDAGWLSDATVRYPIHDPRVNCYGDKEELPGVRTYG
VRNHSETYDVYCFAEKMTGRVFYTASAEKFTFAEAELACSHKGARLATTGELYLAWRGGM
DVCNAGWLRDRSVRYPVNVRRPQCGGGLLGVRTVYLHANQTGYPLPESRYDAFCYTESPD
EEGSGGVEEGSGVLSVTAVTRSPEVFFRRTTTESEAVGEVETRRPETTGTTETMETMGTT
EITETTEITETTGTAETTGTTGTTETMETTGTTGTAETTETTGTTGTTETTGTTETTETT
ESPVEPLPRPPNATQRIPDLVESVAARPDVGREPGASFETPLTKKKIPIECPSKTRFHLL
SPYVGLVFHHRSAAGRYAFTFVEAQLACRSAGASIAKPQQLQAAYEAGYHRCDAGWLLDQ
TVRYPIVFPREKCAGDLGEEAGVQSYGLRPADERYDVYCYTDGLKGEVFHVGSAEGFTFD
EAVSGCREQNGILASVGELHAAWRDGFDKCRAGWLADRSVRYPVNEPRAECGGGKAGVHT
VYAHPNQTGHLDLHARFDAYCFRADIQLIAIEIGLNVTEVQEALLNLTSITDLLRPDVPP
IALPVPVETSGSSSGSADFGSGSAVDKTSGDLSGSGDHSGSGDHSGSGDRSSSGNNTGSG
DHSGSGDRVTSRDGATSGHKVTSGDGAASGDSSDSGDHSGSGDLSTSGNNTGSGDHSGSG
DHSGSGDLSKMVLLLDTKLPLEMELLLETRLILEINLVLEMTLVLEMTLVLEIGLRLDTK
LHLEMELLLETHLILEITLILEITLVLEITLVLETTLALEITLVLETCLVLETTLVLETT
LVLEIGLRPEMVLLLDTKLPLEMELLLETRLILEITLVLEMTLVLEMNLVLEIGLCLDTT
LPPEMELLPVTHLVLESHPAVRVLSCPAEEGIDGTVSGLASGGPQEAGEGSVEIFIFPSS
SASSGALSGSGDLSCSGSGSGSGTTESVSSVDGCGGSGEFSGESSGFVTGWDFSVFGGFP
SGFSSGSGGRLSGSGDAPIFLIDRDLIDASDPIAREEHELGGGRLEFSGSGDVSGSGILS
GDRSGLPSGSGAEFFSGVTFVGSGFTEVTGSSSGEQEVSGFLVYGSGQGSGGHLSGFGRS
SYTSGSGSGISGSGISGSGLSESSTSGEGGVTFLTQDIMIKVFGDTAMFGRGLVEYSADG
GLSSGSGDGGLSSGSGDGGFSSGSGDGGLSSGSADGGLSSGSGDGGFSSGSGDGRLSSGS
GDGGFSSGSGDSGLTAAGVVFPATHSGDLLQAMPPTPSGERVPAESTAGPEEALRVAELP
VTPGDVYVTSDPAALVPAGLPAPPFDAPPGDVDGVLNPCDPDPCGDASCSVEDGVAVCQA
CRHLAAVCMTASCHPPPPPPFSAELDVCHSDPCANGATCVERADSFKCLCLPSYRGKRCE
IEEQHCEDGWTKFQGNCYRHFSDRQMWLDAERRCRDLNAHLVSVGSPEEQRFVNSYTQDY
QWIGLNDKTVEDDFRWTDGSPRQYENWRPNQPDSYFETGEDCVVTVWQENGQWNDVPCNY
HLPFTCKKGPASCGAPPPVENAHTFGSRKPAYPVNAVIRYQCDRGFRQRYRPVVRCQPDG
RWDEPQVECTDVKARRRRQRSGSRSPAASVSQK
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggtggagcgtgctgctgtccgtgtgtctgagcgtcgtcacggcgacgttcgat
ttcgtttacgacgcgcactcgtacatggacccggaggatgtgctgagtgtgagcgttcct
ctggaggagccacagcgccccctgctggggggagacgtcgtactgccgtgttacttcgag
gaccacaccgtcccggaccccggcgcccccgccgtcgtcccgctgtcccaccgcatcaag
tggagcctggtgaccgcagaacgggtctccacggtgctcgtggccttggaggggcaggtg
cacgtcggcgagagctacctggaccgagttcacctgctgggataccccgacaccccgacc
gacgccagcatccggataaccgagctgcggtccggcgacgccggcgcgtatcgctgcgag
gttcagctcggcatcgaggacgacagcgacgtcgtccgtgtgcaggttcgaggtattgtt
ttccactaccggtctgttgcgggacgctacagtttgtcgtttgaggcggcggcggcggcg
tgcggtcagaacagcgccgttgtggcttcgcccgagcagctccaagccgccttccacgac
ggtttccaccagtgcgacgccggctggctctccgacgccaccgtcaggtacccgatccac
gatcctcgcgtgaactgctacggtgacaaggaggaacttcccggggtgagaacgtacgga
gtcagaaaccacagcgagacttacgacgtttactgcttcgctgagaagatgacgggccga
gttttctacaccgcttccgcggagaagttcaccttcgccgaggccgagctggcgtgctct
cataaaggagctcggctggccaccaccggtgagctgtacctggcctggcgtggcgggatg
gacgtctgcaacgccggctggctgcgagaccggagcgtccgctaccctgtcaacgtccgc
cggccgcagtgcggaggaggtctgcttggggtccgaaccgtttatctccacgcaaaccag
accggatacccgcttccagagtcccgctacgacgccttctgctacacggagtcccctgat
gaagaaggttcgggcggcgtggaggagggaagcggcgtgctgagcgttaccgcggtgaca
cggagcccggaggtgttcttcaggaggacgaccaccgagagtgaggcggtcggagaggtg
gagacccgccggccggagaccacgggaaccacggagaccatggagaccatggggaccaca
gagatcacggagactacagagatcacggaaactacagggaccgcagagacaacggggact
acagggaccacggagaccatggagaccacggggactacagggaccgcagagacaacggag
accacggggactacagggaccacggagaccacggggaccacggagaccacggagactacg
gagagcccagtggagccgctgcctcgaccgccgaacgccactcagcgcatcccggacctc
gtggagtccgtcgccgcccggccggatgtcggcagggagcccggcgccagctttgagacg
cctctgactaaaaaaaaaatccccattgagtgtccgagtaagacacggttccacctcttg
tctccgtacgtaggtttggtcttccaccaccgctccgccgccggccggtacgccttcacg
ttcgtcgaggcccagctggcctgtcggagcgccggcgcctccatcgccaagccgcagcag
ctgcaggcggcgtacgaggccggatatcaccggtgtgacgctggttggctgctggatcag
accgtaagatatccgatcgttttccctcgagagaagtgcgccggagatctgggagaggaa
gccggcgttcagtcttacggtctgaggccggcggacgaaagatacgacgtgtattgctac
accgatggactcaaaggggaggttttccacgtcggatcggcggagggtttcaccttcgac
gaggccgtttccggctgtcgggagcagaacggcattctggcctccgtcggggagctccac
gccgcctggagagacggtttcgacaagtgccgcgccggctggctggcggatcgcagcgtc
cgttatcccgtcaacgaaccccgagccgagtgcggaggagggaaagcgggagtgcacacc
gtgtacgctcaccccaaccagacgggccatctggacctccacgctagatttgacgcatat
tgtttcagagcggacattcaacttattgcaattgaaattggacttaatgtcacagaagtc
caggaggctcttctcaacctgacgtccatcaccgatttgttgaggcccgatgttccaccg
atcgctcttcccgtcccagtggagacttcaggttcgagctcgggctcagcagactttggc
tcagggtctgcagtggacaaaacctctggagacctgtctggttctggagatcactctggc
tctggagatcactctggttctggagaccggtctagttctggaaacaacactggttctgga
gaccactctggttctggagatcgggttacgtccagagatggtgctacttctggacacaaa
gttacctctggagatggagctgcttctggagactcgtctgattctggagatcactctggt
tctggagacctgtctacttctggaaacaacactggttctggagatcactctggttctgga
gatcactctggttctggagacctgtctaagatggtgctacttctggacacaaagttacct
ctggagatggagctgcttctggagacccgtctgattctggagatcaatctggttctggag
atgactctggttctggagatgactctggttctggagatcgggttacgtctggacacaaag
ttacatctggagatggagctgcttctggagactcatctgattctggagatcactctgatt
ctggagatcactctggttctggagatcactctggttctggaaacaacactggctctggag
atcactctggttctggagacctgtctagttctggaaacaacactggttctggagaccact
ctggttctggagatcgggttacgtccagagatggtgctacttctggacacaaagttacct
ctggagatggagctgcttctggagacccgtctgattctggagatcactctggttctggag
atgactctggttctggagatgaatctggttctggagatcgggttatgtctggacacaacg
ttacctccggagatggaactacttccggtgacccatctggttctggagtcccatccggca
gtgcgagtgctgagctgcccagcggaggagggcatcgacggcaccgtctctggcttggct
tcgggaggaccccaagaagctggagaagggagcgtggagatctttatcttcccttcatcc
agcgccagttctggagcgctcagtggcagcggcgatctgtcctgctccggctccggatct
ggttccggcactacagaaagtgtctcttctgtagacggctgtgggggaagcggagagttc
tctggggagtcttctggtttcgtcaccggctgggacttttccgtgttcggcggtttcccg
tccggattctcctccggaagcggcgggagactttcaggaagcggagacgctccgatcttc
ctgatagacagagatctgatcgatgcgtccgacccaatcgcccgcgaggaacacgagctc
ggcggcggccggctggagttcagcggctccggcgacgtttccggatcgggaattctcagc
ggcgatcggagcggtttgccctccggaagcggcgccgagttcttctctggcgtgaccttt
gtgggttcagggttcacggaggtcacgggttcatcctctggagaacaggaggtctctggg
tttttagtctacggctccggacagggaagcggtggacatctgtctggatttggaaggtcg
agttatacttctgggtccggatcaggaatatccggatcgggaatatccggatcgggactt
tccgagtcttctacaagcggagaaggcggtgtgacgtttctaacacaggatattatgatt
aaggtgttcggagacacagccatgttcggacgcgggttggtggagtacagcgcagacggt
ggactttcctccggtagcggagacggtggactttcctctggtagcggagacggtggattt
tcctccggtagcggagacggtggactttcctccggtagcgcagacggtggactttcctct
ggtagcggagacggtggattttcctccggtagcggagacggtcgactttcctccggtagc
ggagacggtggattttcctccggtagcggagactccggcttgaccgcagccggcgtcgtt
tttccagcgactcactccggagatcttctgcaggcgatgccgccgactccgtccggtgaa
cgggtaccggccgagagcaccgcgggaccggaggaggcccttcgcgttgccgaacttccg
gtaacccctggcgacgtctacgtgacctctgaccctgctgcgctcgtccctgcaggactg
ccagctcctccctttgatgctccgccgggcgacgtggacggcgtgttgaacccgtgtgat
cccgacccgtgtggtgacgcctcgtgctcggtggaggacggagtcgccgtctgtcaggct
tgccgccacctcgccgccgtgtgcatgactgcgtcttgtcacccgccaccccccccccct
ttttccgcagagctagatgtgtgccactccgacccttgtgccaacggcgccacctgtgtg
gagcgtgcagactctttcaaatgcttatgcctgccgagctacagagggaaacgctgcgag
atcgaggagcagcattgtgaggacggctggaccaagtttcaggggaactgctaccgccac
ttctcggacagacagatgtggctggacgccgagcggcgctgccgcgacctgaacgcccac
ctggtcagcgtcggctcgccggaggagcagcgcttcgtcaactcatacacgcaggactac
cagtggatcggcctgaacgacaagacggtagaggacgacttccgctggacggacggcagc
ccgcggcaatacgagaactggaggccgaaccagccggacagctacttcgaaaccggggag
gactgtgtggtgacggtctggcaggagaacggccagtggaacgacgtgccgtgtaactac
catctgccgttcacctgcaagaaaggcccagcgtcgtgcggcgccccgccgccggtggag
aacgctcacacgttcggcagcaggaagccggcgtacccggtgaacgccgtcatccgttac
cagtgcgaccgcggcttcaggcagcgctaccggccggtggttcgctgccagccggacgga
cggtgggacgaaccccaagtggagtgtaccgacgtgaaagccagaagaagaagacagcga
agcggcagcaggagtccggcagcgagcgtctctcagaagtaa
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