Brachyistius frenatus (kelp perch): 138631388
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Entry
138631388 CDS
T10614
Symbol
ddx6
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03018
RNA degradation
Brite
Enzymes [BR:
bfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138631388 (ddx6)
Messenger RNA biogenesis [BR:
bfre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
138631388 (ddx6)
mRNA degradation factors
5'-3' decay
Decapping complex
138631388 (ddx6)
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138631388 (ddx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138631388
NCBI-ProteinID:
XP_069572395
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All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MSTVRTENPVILGLSNQNGQLRGSVKPAGAPGGGGPQQQQFNQMKGTINNGNAQPAPTTN
AVIKPGDDWKKNLKLPPKDTRMKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQ
EESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKRDFIQAVVIVPTRELALQVSQI
CIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVIIATPGRILDLIKKGVAKVNQVQMT
VLDEADKLLSQDFVAMMEEMLGFLPKQRQILLYSATFPLSVQKFMNAHLQKPYEINLMEE
LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFY
IHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYLHRIG
RSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPGIIDKSLYVAEYHSESGEEGKP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggtcaggacggagaacccggtgatcttgggcttgtccaaccagaacggtcag
ctcagaggctcggtgaagccggctggagcgccgggtggaggtggccctcagcagcagcag
tttaaccagatgaaaggcacaatcaacaatgggaacgcccagccggcccccacaacgaat
gctgtcatcaaacctggagatgactggaagaaaaatttgaaattgccgccaaaggacacg
aggatgaaaacttcggatgtgactgcaactaaaggcaatgagtttgaagattattgccta
aagagggagctgctcatgggaatctttgagatgggctgggaaaagccatctccaatccag
gaggaaagcattcccattgcactgtcaggacgggatatcttggccagagccaagaatggc
acgggaaagagtggagcctacctcattcccttacttgaacgcattgacctgaagagggac
ttcatacaagctgtggtcatagtgcccaccagagaactggctctgcaagtaagccaaata
tgtatccaggtcagcaaacacatgggtggagtgaaggtaatggcaaccacaggtggaacc
aacctccgtgatgacatcatgagactcgatgaaactgtacacgtgatcattgccactcct
gggaggattttagacctcatcaagaaaggagtggccaaagtcaatcaagtgcagatgact
gttctggatgaagctgacaaactcctgtcgcaggacttcgtggccatgatggaggagatg
ctgggcttcctgcccaaacagaggcagattttgctttattctgcaaccttccctctcagt
gtgcagaagtttatgaacgcacacttgcagaagccctatgagatcaacctaatggaggag
cttacactgaagggtgtgactcagtattatgcttatgtaactgaaaggcaaaaagtccat
tgcctcaacaccttgttttccaggctccagatcaaccagtctataatcttctgcaactcc
tctcagagagtggaactcctcgccaagaagatctcccagcttggttattcgtgtttctac
attcatgccaagatgagacaggagcatcgcaaccgtgtgttccacgacttcagaaatgga
ctgtgccggaatctagtctgcactgacctcttcacaagaggaattgacattcaagctgtg
aatgttgtgatcaactttgatttccccaagctgggagaaacataccttcatcgcatcggt
cgatctggccgatttggacacctgggtttagccatcaacctcattacatacgacgatcgc
ttcaacctgaaagggattgaggagcagcttggaacagagatcaagcccatccctggcatc
attgacaagagcctatatgtggcagagtaccacagtgagagtggcgaagaaggcaagcca
tga
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integrated database retrieval system
