Brachyistius frenatus (kelp perch): 138631410
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Entry
138631410 CDS
T10614
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03030
DNA replication
bfre03410
Base excision repair
bfre03420
Nucleotide excision repair
bfre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138631410 (rfc5)
03410 Base excision repair
138631410 (rfc5)
03420 Nucleotide excision repair
138631410 (rfc5)
03430 Mismatch repair
138631410 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfre03032
]
138631410 (rfc5)
03036 Chromosome and associated proteins [BR:
bfre03036
]
138631410 (rfc5)
03400 DNA repair and recombination proteins [BR:
bfre03400
]
138631410 (rfc5)
DNA replication proteins [BR:
bfre03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
138631410 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
138631410 (rfc5)
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
138631410 (rfc5)
DNA repair and recombination proteins [BR:
bfre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
138631410 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
138631410 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_24
RuvB_N
AAA_14
AAA_16
ResIII
DEAD
AAA_assoc_2
DUF815
PhoH
ATPase_2
AAA_7
AAA_5
AAA_19
AAA_30
TIP49
Thioredoxin_6
nSTAND3
AAA_2
Mg_chelatase
AAA_25
DNAX_ATPase_lid
bpMoxR
DUF4119
Motif
Other DBs
NCBI-GeneID:
138631410
NCBI-ProteinID:
XP_069572450
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MASTSKAPLQTRNLPWVEKYRPQTLDELISHKDILNTIQRFISEEKLPHLLFYGPPGTGK
TSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EYVVEQESIDLSPDGMKAIVTLSSGDMRRSLNILQSTNMAYGKVTEDTVYTCTGHPLRSD
IANILDWCLNKDFTTAYKQILQLKTLKGLALHDILTEIHLLVHRVDFPPAVRIVLLIKLA
DVEHRLASGTNEKIQLSSMVAAFQAVRDLVVSEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacaagtaaagcgccgttacagaccagaaacttaccatgggttgaaaaatac
agaccgcagacacttgatgaactgatctcacacaaagatattctgaacaccatccagagg
tttatcagtgaggaaaagctcccccacctcttgttctacggccccccaggaactggcaaa
acctccaccatcctcgcctgcgccaggcagctctacaaggacaaagagttcaactccatg
gtgttggagctgaacgcatcggatgacagagggatcgatgttgtccgaggtcccattctg
agttttgccagcaccaggaccatcttcaagaagggcttcaagttggtgatactggacgag
gccgatgccatgacccaggatgcccagaatgcattgcggcgagtgattgagaagttcaca
gaaaacactcgattctgtctcatctgcaactacctgtccaagatcatcccggccctgcag
tctcgctgcaccaggttccgcttcggcccgctgtccccggaccagatgatccctcggctg
gagtacgtcgtcgagcaggagagtattgacctcagtccagatggaatgaaggccattgtg
accttatcatcaggtgacatgagaagatcactcaacatattgcagagcaccaatatggcg
tacgggaaggtcaccgaggacacggtgtacacctgcacaggtcacccgctccgctcagac
atcgccaacatcctcgactggtgcctcaacaaagacttcaccacagcgtacaaacaaatc
cttcagctgaagactttgaaaggtttggctctgcacgacatcctcacggagatccatctg
ctcgtacacagagtggactttcctccagctgttcggattgttctgctcatcaagttagcc
gacgttgaacaccggctcgcctcggggaccaacgagaagatccagctgagctccatggtt
gcagctttccaggcagtgagagacctggtggtcagcgaggcctcttag
DBGET
integrated database retrieval system